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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008271
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We have found 2405 results. Now displaying 7 of 49 with 50 rows per page. This search has taken 0.662s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v2023010.1
n.a. S-locus lectin protein kinase family protein isoform 1 [Theobroma cacao] gi|508721005|gb|EOY12902.1| chr1 23742959 23745766 +
2 domain predictions
2 GO terms
Lj1g3v2033030.1
n.a. S-locus lectin protein kinase family protein isoform 2, partial [Theobroma cacao] gi|508721006|gb|EOY12903.1| chr1 23753092 23756677 +
2 domain predictions
2 GO terms
Lj1g3v2035180.2
n.a. Serine/threonine protein kinase AFC3 [Medicago truncatula] gi|357466609|ref|XP_003603589.1| chr1 23853820 23857814 -
2 domain predictions
2 GO terms
Lj1g3v2035180.3
n.a. PREDICTED: serine/threonine-protein kinase AFC3-like [Glycine max] gi|356515564|ref|XP_003526469.1| chr1 23853820 23857767 -
2 domain predictions
2 GO terms
Lj1g3v2065420.1
n.a. PREDICTED: casein kinase I isoform delta-like [Glycine max] gi|356515601|ref|XP_003526487.1| chr1 24377875 24383177 +
2 domain predictions
2 GO terms
Lj1g3v2093240.1
n.a. Casein kinase I protein [Theobroma cacao] gi|508782527|gb|EOY29783.1| chr1 24659751 24667244 +
2 domain predictions
2 GO terms
Lj1g3v2093240.2
n.a. Casein kinase I protein [Theobroma cacao] gi|508782527|gb|EOY29783.1| chr1 24659751 24667244 +
2 domain predictions
2 GO terms
Lj1g3v2095470.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like isoform X1 [Cicer arietinum] gi|502131757|ref|XP_004501091.1| chr1 24754477 24763730 +
2 domain predictions
2 GO terms
Lj1g3v2095520.1
n.a. PREDICTED: serine/threonine-protein kinase Aurora-1-like isoform X1 [Cicer arietinum] gi|502131750|ref|XP_004501089.1| chr1 24775620 24780955 -
2 domain predictions
2 GO terms
Lj1g3v2096140.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like [Glycine max] gi|356510067|ref|XP_003523762.1| chr1 25083270 25086894 -
2 domain predictions
2 GO terms
Lj1g3v2096160.1
n.a. PREDICTED: receptor-like protein kinase HAIKU2-like [Glycine max] gi|356507963|ref|XP_003522732.1| chr1 25102415 25119448 -
2 domain predictions
2 GO terms
Lj1g3v2141160.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like [Cicer arietinum] gi|502131353|ref|XP_004500957.1| chr1 25859190 25863184 +
2 domain predictions
2 GO terms
Lj1g3v2264920.1
n.a. PREDICTED: tyrosine-protein kinase TXK-like [Glycine max] gi|356509608|ref|XP_003523539.1| chr1 26568280 26576170 -
2 domain predictions
2 GO terms
Lj1g3v2264920.2
n.a. PREDICTED: tyrosine-protein kinase TXK-like [Glycine max] gi|356509608|ref|XP_003523539.1| chr1 26568280 26576170 -
2 domain predictions
2 GO terms
Lj1g3v2268430.1
n.a. PREDICTED: probable serine/threonine-protein kinase WNK5-like [Glycine max] gi|356496301|ref|XP_003517007.1| chr1 26716775 26722087 -
2 domain predictions
2 GO terms
Lj1g3v2295270.1
n.a. PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic-like isoform X1 [Cicer arietinum] gi|502131084|ref|XP_004500869.1| chr1 26958068 26961189 -
2 domain predictions
2 GO terms
Lj1g3v2295270.2
n.a. PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic-like isoform X1 [Cicer arietinum] gi|502131084|ref|XP_004500869.1| chr1 26958068 26961189 -
2 domain predictions
2 GO terms
Lj1g3v2295280.1
n.a. PREDICTED: serine/threonine-protein kinase PBS1-like [Cicer arietinum] gi|502131081|ref|XP_004500868.1| chr1 26965209 26969321 -
2 domain predictions
2 GO terms
Lj1g3v2312930.1
n.a. n.a. chr1 27184595 27206641 -
2 domain predictions
2 GO terms
Lj1g3v2312950.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Glycine max] gi|356523290|ref|XP_003530273.1| chr1 27196031 27207565 +
2 domain predictions
2 GO terms
Lj1g3v2313000.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840-like isoform X2 [Cicer arietinum] gi|502104059|ref|XP_004492426.1| chr1 27232813 27236764 -
2 domain predictions
2 GO terms
Lj1g3v2372440.1
n.a. PREDICTED: lectin-domain containing receptor kinase VI.3-like [Glycine max] gi|356566703|ref|XP_003551569.1| chr1 27925423 27927990 -
2 domain predictions
2 GO terms
Lj1g3v2372440.2
n.a. PREDICTED: lectin-domain containing receptor kinase VI.3-like [Glycine max] gi|356566703|ref|XP_003551569.1| chr1 27925423 27927990 -
2 domain predictions
2 GO terms
Lj1g3v2377960.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Glycine max] gi|356521068|ref|XP_003529180.1| chr1 28075457 28079707 +
2 domain predictions
2 GO terms
Lj1g3v2377960.2
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357506189|ref|XP_003623383.1| chr1 28075457 28082926 +
2 domain predictions
2 GO terms
Lj1g3v2449150.1
n.a. PREDICTED: CBL-interacting protein kinase 2-like [Glycine max] gi|356568210|ref|XP_003552306.1| chr1 28636322 28639200 +
2 domain predictions
2 GO terms
Lj1g3v2512570.1
n.a. PREDICTED: serine/threonine-protein kinase HT1-like [Glycine max] gi|356532165|ref|XP_003534644.1| chr1 28907232 28911758 -
2 domain predictions
2 GO terms
Lj1g3v2512570.2
n.a. PREDICTED: serine/threonine-protein kinase HT1-like [Glycine max] gi|356532165|ref|XP_003534644.1| chr1 28907232 28911758 -
2 domain predictions
2 GO terms
Lj1g3v2512720.1
n.a. PREDICTED: probable serine/threonine-protein kinase WNK5 [Glycine max] gi|356566796|ref|XP_003551613.1| chr1 28980445 28986434 +
2 domain predictions
2 GO terms
Lj1g3v2512720.2
n.a. with no lysine kinase 10 [Glycine max] gi|351723577|ref|NP_001236004.1| chr1 28980445 28986434 +
2 domain predictions
2 GO terms
Lj1g3v2533770.1
n.a. FERONIA receptor-like kinase precursor [Glycine max] gi|351726958|ref|NP_001237656.1| chr1 29029722 29034240 +
2 domain predictions
2 GO terms
Lj1g3v2534820.1
n.a. PREDICTED: serine/threonine-protein kinase STN8, chloroplastic-like [Glycine max] gi|356506624|ref|XP_003522077.1| chr1 29056883 29061685 +
2 domain predictions
2 GO terms
Lj1g3v2536140.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840-like isoform 1 [Glycine max] gi|356568252|ref|XP_003552327.1| chr1 29206704 29216049 +
2 domain predictions
2 GO terms
Lj1g3v2580580.1
n.a. PREDICTED: serine/threonine-protein kinase At5g01020-like [Glycine max] gi|356532117|ref|XP_003534620.1| chr1 29498855 29502735 +
2 domain predictions
2 GO terms
Lj1g3v2611330.1
n.a. PREDICTED: shaggy-related protein kinase theta-like [Glycine max] gi|356568314|ref|XP_003552357.1| chr1 30157184 30162713 -
2 domain predictions
2 GO terms
Lj1g3v2611530.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Glycine max] gi|356524497|ref|XP_003530865.1| chr1 30273486 30276880 -
2 domain predictions
2 GO terms
Lj1g3v2661410.1
n.a. Protein kinase; U box [Medicago truncatula] gi|87240964|gb|ABD32822.1| chr1 31094091 31100069 +
2 domain predictions
2 GO terms
Lj1g3v2661410.2
n.a. Protein kinase; U box [Medicago truncatula] gi|87240964|gb|ABD32822.1| chr1 31094340 31100069 +
2 domain predictions
2 GO terms
Lj1g3v2713910.1
n.a. calmodulin-binding receptor-like cytoplasmic kinase [Glycine max] gi|351727172|ref|NP_001235360.1| chr1 31319281 31321167 +
2 domain predictions
2 GO terms
Lj1g3v2742300.1
n.a. MAP kinase 4 [Theobroma cacao] gi|508703991|gb|EOX95887.1| chr1 31546791 31554729 -
2 domain predictions
2 GO terms
Lj1g3v2752350.1
n.a. PREDICTED: probable serine/threonine-protein kinase At1g01540-like [Cicer arietinum] gi|502105347|ref|XP_004492785.1| chr1 31575151 31578960 -
2 domain predictions
2 GO terms
Lj1g3v2752350.2
n.a. PREDICTED: probable serine/threonine-protein kinase At1g01540-like [Cicer arietinum] gi|502105347|ref|XP_004492785.1| chr1 31577253 31581251 -
2 domain predictions
2 GO terms
Lj1g3v2808030.1
n.a. LysM type receptor kinase [Lotus japonicus] gi|290490602|dbj|BAI79288.1| chr1 31839713 31844136 +
2 domain predictions
2 GO terms
Lj1g3v2809520.1
n.a. PREDICTED: probable serine/threonine-protein kinase DDB_G0282963-like isoform X1 [Cicer arietinum] gi|502150836|ref|XP_004508148.1| chr1 32076990 32081128 -
2 domain predictions
2 GO terms
Lj1g3v2809520.2
n.a. PREDICTED: probable serine/threonine-protein kinase DDB_G0282963-like isoform X1 [Cicer arietinum] gi|502150836|ref|XP_004508148.1| chr1 32076990 32081128 -
2 domain predictions
2 GO terms
Lj1g3v2924200.1
n.a. PREDICTED: protein kinase G11A-like [Glycine max] gi|356529977|ref|XP_003533562.1| chr1 32937225 32944268 -
2 domain predictions
2 GO terms
Lj1g3v2942070.1
n.a. PREDICTED: probable receptor-like protein kinase At5g15080-like isoform X1 [Cicer arietinum] gi|502090235|ref|XP_004489164.1| chr1 33415869 33420399 +
2 domain predictions
2 GO terms
Lj1g3v2942070.2
n.a. PREDICTED: probable receptor-like protein kinase At5g15080-like isoform X2 [Cicer arietinum] gi|502090238|ref|XP_004489165.1| chr1 33415869 33420399 +
2 domain predictions
2 GO terms
Lj1g3v2982400.1
n.a. PREDICTED: probable serine/threonine-protein kinase At1g54610-like [Glycine max] gi|356523580|ref|XP_003530415.1| chr1 33995909 34002265 -
2 domain predictions
2 GO terms
Lj1g3v2982400.2
n.a. PREDICTED: probable serine/threonine-protein kinase At1g54610-like isoform X2 [Cicer arietinum] gi|502101718|ref|XP_004491857.1| chr1 33995909 34002265 -
2 domain predictions
2 GO terms