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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PF13855
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 652 results. Now displaying 1 of 14 with 50 rows per page. This search has taken 0.224s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3023720.1
LjKlavier leucine-rich repeat receptor-like kinase [Lotus japonicus] gi|353677868|dbj|BAL04590.1| chr1 34474974 34479067 +
2 domain predictions
1 GO term
Lj3g3v3375770.1
LjHar1 hypernodulation aberrant root formation protein [Lotus japonicus] gi|24940156|emb|CAD42335.1| chr3 41520393 41525499 +
2 domain predictions
1 GO term
Lj4g3v0281040.1
LjFls2 flagellin-sensing 2-like protein [Lotus japonicus] gi|355346200|gb|AER60531.1| chr4 3284600 3289068 +
2 domain predictions
1 GO term
Lj0g3v0001859.1
n.a. Receptor kinase [Medicago truncatula] gi|357501751|ref|XP_003621164.1| chr0 548278 551234 +
2 domain predictions
1 GO term
Lj0g3v0004239.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like isoform X1 [Cicer arietinum] gi|502158481|ref|XP_004511169.1| chr0 1486200 1495290 -
2 domain predictions
1 GO term
Lj0g3v0004239.2
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like isoform X1 [Cicer arietinum] gi|502158481|ref|XP_004511169.1| chr0 1491342 1495290 -
2 domain predictions
1 GO term
Lj0g3v0008839.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Glycine max] gi|356517903|ref|XP_003527625.1| chr0 3594790 3597374 +
2 domain predictions
1 GO term
Lj0g3v0011919.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357471389|ref|XP_003605979.1| chr0 4518757 4519440 -
2 domain predictions
1 GO term
Lj0g3v0013569.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356495069|ref|XP_003516403.1| chr0 5132444 5135578 -
2 domain predictions
1 GO term
Lj0g3v0013579.1
n.a. PREDICTED: receptor-like protein 12-like [Cicer arietinum] gi|502177353|ref|XP_004516064.1| chr0 5132499 5135598 -
2 domain predictions
1 GO term
Lj0g3v0019209.1
n.a. PREDICTED: probable inactive receptor kinase RLK902-like [Cicer arietinum] gi|502163215|ref|XP_004512763.1| chr0 7596646 7599369 -
2 domain predictions
1 GO term
Lj0g3v0020169.1
n.a. PREDICTED: receptor-like protein 12-like [Cicer arietinum] gi|502147282|ref|XP_004506724.1| chr0 8075083 8078449 +
2 domain predictions
1 GO term
Lj0g3v0020179.1
n.a. n.a. chr0 8075083 8089893 -
2 domain predictions
1 GO term
Lj0g3v0020189.1
n.a. PREDICTED: receptor-like protein 12-like [Cicer arietinum] gi|502147282|ref|XP_004506724.1| chr0 8087309 8089893 +
2 domain predictions
1 GO term
Lj0g3v0022029.1
n.a. Kinase-like protein [Medicago truncatula] gi|357491853|ref|XP_003616214.1| chr0 8901816 8902952 +
2 domain predictions
1 GO term
Lj0g3v0022039.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Cicer arietinum] gi|502096667|ref|XP_004490803.1| chr0 8902899 8903116 +
2 domain predictions
1 GO term
Lj0g3v0045329.1
n.a. PREDICTED: leucine-rich repeat receptor-like protein kinase PXL2-like [Cicer arietinum] gi|502114811|ref|XP_004495057.1| chr0 14905769 14908489 +
2 domain predictions
1 GO term
Lj0g3v0055039.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Cicer arietinum] gi|502097475|ref|XP_004491002.1| chr0 17639362 17641296 +
2 domain predictions
1 GO term
Lj0g3v0062659.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 21101761 21102390 -
2 domain predictions
1 GO term
Lj0g3v0066329.1
n.a. PREDICTED: leucine-rich repeat protein lrrA-like [Glycine max] gi|356563459|ref|XP_003549980.1| chr0 23306016 23308882 +
2 domain predictions
1 GO term
Lj0g3v0066349.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Cicer arietinum] gi|502134366|ref|XP_004502093.1| chr0 23322310 23323491 +
2 domain predictions
1 GO term
Lj0g3v0075369.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Cicer arietinum] gi|502135214|ref|XP_004502257.1| chr0 28565917 28573472 +
2 domain predictions
1 GO term
Lj0g3v0077519.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356561444|ref|XP_003548991.1| chr0 29748725 29749878 +
2 domain predictions
1 GO term
Lj0g3v0086719.1
n.a. PREDICTED: somatic embryogenesis receptor kinase 4-like [Glycine max] gi|356559929|ref|XP_003548248.1| chr0 35046088 35050220 -
2 domain predictions
1 GO term
Lj0g3v0090439.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 37254703 37257214 -
2 domain predictions
1 GO term
Lj0g3v0094389.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At1g50610-like [Cicer arietinum] gi|502089636|ref|XP_004488972.1| chr0 39688550 39691233 +
2 domain predictions
1 GO term
Lj0g3v0095829.1
n.a. PREDICTED: receptor-like protein 12-like [Cicer arietinum] gi|502177353|ref|XP_004516064.1| chr0 40361351 40362249 -
2 domain predictions
1 GO term
Lj0g3v0095839.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356495069|ref|XP_003516403.1| chr0 40362218 40363688 -
2 domain predictions
1 GO term
Lj0g3v0100639.1
n.a. n.a. chr0 42535737 42541606 -
2 domain predictions
1 GO term
Lj0g3v0100639.2
n.a. n.a. chr0 42535737 42541606 -
2 domain predictions
1 GO term
Lj0g3v0114409.1
n.a. PREDICTED: disease resistance protein RGA2-like [Glycine max] gi|356570480|ref|XP_003553414.1| chr0 50167971 50170933 +
2 domain predictions
1 GO term
Lj0g3v0114919.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356503054|ref|XP_003520327.1| chr0 50450689 50453761 +
2 domain predictions
1 GO term
Lj0g3v0115709.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like [Glycine max] gi|356537708|ref|XP_003537367.1| chr0 50859370 50863385 +
2 domain predictions
1 GO term
Lj0g3v0116329.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356561434|ref|XP_003548986.1| chr0 51162485 51165361 -
2 domain predictions
1 GO term
Lj0g3v0128389.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Cicer arietinum] gi|502165747|ref|XP_004513677.1| chr0 57989311 57990418 +
2 domain predictions
1 GO term
Lj0g3v0134889.1
n.a. Receptor-like kinase [Medicago truncatula] gi|357493297|ref|XP_003616937.1| chr0 61907973 61912446 +
2 domain predictions
1 GO term
Lj0g3v0167089.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2-like [Glycine max] gi|356561456|ref|XP_003548997.1| chr0 79429669 79434308 +
2 domain predictions
1 GO term
Lj0g3v0173409.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase ERECTA-like [Glycine max] gi|356552384|ref|XP_003544548.1| chr0 83385336 83391158 -
2 domain predictions
1 GO term
Lj0g3v0196229.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g48740-like [Glycine max] gi|356559015|ref|XP_003547797.1| chr0 95686819 95693065 -
2 domain predictions
1 GO term
Lj0g3v0199199.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 97595160 97597468 -
2 domain predictions
1 GO term
Lj0g3v0199339.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Glycine max] gi|356561470|ref|XP_003549004.1| chr0 97688869 97692688 -
2 domain predictions
1 GO term
Lj0g3v0203199.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357439013|ref|XP_003589783.1| chr0 100705047 100707368 +
2 domain predictions
1 GO term
Lj0g3v0205729.1
n.a. Leucine-rich repeat-containing protein [Medicago truncatula] gi|357489671|ref|XP_003615123.1| chr0 102342302 102346014 -
2 domain predictions
1 GO term
Lj0g3v0205949.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Glycine max] gi|356569387|ref|XP_003552883.1| chr0 102542288 102543508 +
2 domain predictions
1 GO term
Lj0g3v0233449.1
n.a. n.a. chr0 120875579 120883284 -
2 domain predictions
1 GO term
Lj0g3v0233459.1
n.a. NBS resistance protein [Medicago truncatula] gi|357506453|ref|XP_003623515.1| chr0 120875579 120882710 +
2 domain predictions
1 GO term
Lj0g3v0241409.1
n.a. PREDICTED: leucine-rich repeat extensin-like protein 3-like [Cicer arietinum] gi|502144046|ref|XP_004505561.1| chr0 125217622 125220207 -
2 domain predictions
1 GO term
Lj0g3v0243349.1
n.a. PREDICTED: protein NSP-INTERACTING KINASE 3-like [Glycine max] gi|356497611|ref|XP_003517653.1| chr0 126210556 126215918 -
2 domain predictions
1 GO term
Lj0g3v0244309.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like [Glycine max] gi|356515144|ref|XP_003526261.1| chr0 126783691 126786749 +
2 domain predictions
1 GO term
Lj0g3v0244319.1
n.a. HAESA-like 1 isoform 2 [Theobroma cacao] gi|508707636|gb|EOX99532.1| chr0 126783691 126785998 +
2 domain predictions
1 GO term