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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR27000
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 366 results. Now displaying 1 of 8 with 50 rows per page. This search has taken 0.076s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3023720.1
LjKlavier leucine-rich repeat receptor-like kinase [Lotus japonicus] gi|353677868|dbj|BAL04590.1| chr1 34474974 34479067 +
1 domain prediction
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Lj3g3v3375770.1
LjHar1 hypernodulation aberrant root formation protein [Lotus japonicus] gi|24940156|emb|CAD42335.1| chr3 41520393 41525499 +
1 domain prediction
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Lj4g3v0281040.1
LjFls2 flagellin-sensing 2-like protein [Lotus japonicus] gi|355346200|gb|AER60531.1| chr4 3284600 3289068 +
1 domain prediction
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Lj0g3v0001859.1
n.a. Receptor kinase [Medicago truncatula] gi|357501751|ref|XP_003621164.1| chr0 548278 551234 +
1 domain prediction
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Lj0g3v0007739.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Glycine max] gi|356510820|ref|XP_003524132.1| chr0 3025281 3026071 -
1 domain prediction
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Lj0g3v0008839.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Glycine max] gi|356517903|ref|XP_003527625.1| chr0 3594790 3597374 +
1 domain prediction
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Lj0g3v0022039.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Cicer arietinum] gi|502096667|ref|XP_004490803.1| chr0 8902899 8903116 +
1 domain prediction
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Lj0g3v0042849.1
n.a. Kinase-like protein [Medicago truncatula] gi|357484475|ref|XP_003612525.1| chr0 14081007 14083549 +
1 domain prediction
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Lj0g3v0045329.1
n.a. PREDICTED: leucine-rich repeat receptor-like protein kinase PXL2-like [Cicer arietinum] gi|502114811|ref|XP_004495057.1| chr0 14905769 14908489 +
1 domain prediction
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Lj0g3v0066349.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Cicer arietinum] gi|502134366|ref|XP_004502093.1| chr0 23322310 23323491 +
1 domain prediction
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Lj0g3v0067549.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 1-like [Glycine max] gi|356516754|ref|XP_003527058.1| chr0 23998624 24003883 -
1 domain prediction
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Lj0g3v0067549.2
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 1-like [Glycine max] gi|356516754|ref|XP_003527058.1| chr0 23998624 24003883 -
1 domain prediction
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Lj0g3v0073579.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840-like [Glycine max] gi|356551958|ref|XP_003544339.1| chr0 27615994 27623359 +
1 domain prediction
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Lj0g3v0073579.3
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840-like [Glycine max] gi|356551958|ref|XP_003544339.1| chr0 27615994 27623359 +
1 domain prediction
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Lj0g3v0087049.1
n.a. receptor-like protein kinase 2 precursor [Glycine max] gi|351721253|ref|NP_001237715.1| chr0 35240324 35244693 -
1 domain prediction
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Lj0g3v0104289.1
n.a. leucine-rich repeat receptor-like kinase [Lotus japonicus] gi|353677868|dbj|BAL04590.1| chr0 44586357 44587111 +
1 domain prediction
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Lj0g3v0106439.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770-like [Glycine max] gi|356559110|ref|XP_003547844.1| chr0 45774831 45781977 -
1 domain prediction
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Lj0g3v0110529.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] gi|356540452|ref|XP_003538703.1| chr0 47947649 47948986 -
1 domain prediction
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Lj0g3v0110529.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] gi|356540452|ref|XP_003538703.1| chr0 47948300 47948966 -
1 domain prediction
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Lj0g3v0134589.2
n.a. ERECTA-like kinase [Glycine max] gi|351726293|ref|NP_001235330.1| chr0 61750638 61755854 +
1 domain prediction
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Lj0g3v0173389.1
n.a. ERECTA [Glycine max] gi|351724175|ref|NP_001235257.1| chr0 83382374 83384990 -
1 domain prediction
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Lj0g3v0173409.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase ERECTA-like [Glycine max] gi|356552384|ref|XP_003544548.1| chr0 83385336 83391158 -
1 domain prediction
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Lj0g3v0195549.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2-like [Cicer arietinum] gi|502106893|ref|XP_004493090.1| chr0 95421828 95424462 -
1 domain prediction
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Lj0g3v0196449.1
n.a. Receptor-like kinase [Medicago truncatula] gi|357501755|ref|XP_003621166.1| chr0 95785653 95786482 -
1 domain prediction
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Lj0g3v0196459.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357501759|ref|XP_003621168.1| chr0 95786710 95787511 -
1 domain prediction
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Lj0g3v0197739.1
n.a. PREDICTED: leucine-rich repeat receptor-like protein kinase PXL2-like [Cicer arietinum] gi|502114811|ref|XP_004495057.1| chr0 96373524 96374342 +
1 domain prediction
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Lj0g3v0203199.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357439013|ref|XP_003589783.1| chr0 100705047 100707368 +
1 domain prediction
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Lj0g3v0212229.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Glycine max] gi|356546810|ref|XP_003541815.1| chr0 107062933 107063527 -
1 domain prediction
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Lj0g3v0212239.1
n.a. Kinase-like protein [Medicago truncatula] gi|357484615|ref|XP_003612595.1| chr0 107065801 107066487 -
1 domain prediction
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Lj0g3v0212249.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Glycine max] gi|356529793|ref|XP_003533472.1| chr0 107066921 107068249 -
1 domain prediction
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Lj0g3v0217709.1
n.a. ERECTA-like kinase [Glycine max] gi|351726455|ref|NP_001237639.1| chr0 110826353 110830393 -
1 domain prediction
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Lj0g3v0220159.1
n.a. PREDICTED: phytosulfokine receptor 2-like [Glycine max] gi|356546862|ref|XP_003541841.1| chr0 112635233 112639990 -
1 domain prediction
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Lj0g3v0220169.1
n.a. PREDICTED: phytosulfokine receptor 2-like [Glycine max] gi|356546862|ref|XP_003541841.1| chr0 112635481 112639990 -
1 domain prediction
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Lj0g3v0241799.1
n.a. PREDICTED: phytosulfokine receptor 2-like [Cicer arietinum] gi|502118928|ref|XP_004496444.1| chr0 125494798 125495329 -
1 domain prediction
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Lj0g3v0244309.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like [Glycine max] gi|356515144|ref|XP_003526261.1| chr0 126783691 126786749 +
1 domain prediction
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Lj0g3v0244319.1
n.a. HAESA-like 1 isoform 2 [Theobroma cacao] gi|508707636|gb|EOX99532.1| chr0 126783691 126785998 +
1 domain prediction
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Lj0g3v0247829.1
n.a. Polygalacturonase inhibitor [Medicago truncatula] gi|357509859|ref|XP_003625218.1| chr0 128477084 128478271 -
1 domain prediction
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Lj0g3v0255579.1
n.a. tyrosine-sulfated glycopeptide receptor 1-like precursor [Glycine max] gi|358248614|ref|NP_001239911.1| chr0 132766656 132768871 +
1 domain prediction
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Lj0g3v0266899.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170-like [Cicer arietinum] gi|502166974|ref|XP_004514026.1| chr0 138286275 138293398 +
1 domain prediction
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Lj0g3v0266969.1
n.a. Receptor-like kinase [Medicago truncatula] gi|357501755|ref|XP_003621166.1| chr0 138344724 138346275 -
1 domain prediction
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Lj0g3v0278349.1
n.a. probable leucine-rich repeat receptor-like protein kinase At1g35710-like precursor [Glycine max] gi|359807163|ref|NP_001241099.1| chr0 144542642 144544812 -
1 domain prediction
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Lj0g3v0282649.1
n.a. n.a. chr0 146542871 146545973 -
1 domain prediction
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Lj0g3v0282649.2
n.a. n.a. chr0 146544935 146547381 -
1 domain prediction
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Lj0g3v0282659.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357508031|ref|XP_003624304.1| chr0 146545606 146547150 +
1 domain prediction
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Lj0g3v0284579.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357508031|ref|XP_003624304.1| chr0 147661718 147663469 -
1 domain prediction
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Lj0g3v0291029.3
n.a. Receptor like protein 33 [Theobroma cacao] gi|508725116|gb|EOY17013.1| chr0 151083660 151090180 +
1 domain prediction
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Lj0g3v0291039.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Cicer arietinum] gi|502078346|ref|XP_004485915.1| chr0 151090772 151094021 +
1 domain prediction
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Lj0g3v0297189.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like [Glycine max] gi|356515144|ref|XP_003526261.1| chr0 154416084 154419775 +
1 domain prediction
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Lj0g3v0303549.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357516993|ref|XP_003628785.1| chr0 158016672 158020224 -
1 domain prediction
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Lj0g3v0305359.1
n.a. PREDICTED: leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1-like [Glycine max] gi|356508750|ref|XP_003523117.1| chr0 159165017 159167509 +
1 domain prediction
 –