Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • SSF52058
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 1451 results. Now displaying 1 of 30 with 50 rows per page. This search has taken 0.318s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3023720.1
LjKlavier leucine-rich repeat receptor-like kinase [Lotus japonicus] gi|353677868|dbj|BAL04590.1| chr1 34474974 34479067 +
2 domain predictions
 –
Lj2g3v1467920.1
LjSymRK receptor-like kinase SYMRK [Lotus japonicus] gi|21622628|gb|AAM67418.1|AF492655_1 chr2 23244149 23250251 -
2 domain predictions
 –
Lj3g3v3375770.1
LjHar1 hypernodulation aberrant root formation protein [Lotus japonicus] gi|24940156|emb|CAD42335.1| chr3 41520393 41525499 +
2 domain predictions
 –
Lj4g3v0281040.1
LjFls2 flagellin-sensing 2-like protein [Lotus japonicus] gi|355346200|gb|AER60531.1| chr4 3284600 3289068 +
2 domain predictions
 –
Lj0g3v0000209.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356506581|ref|XP_003522058.1| chr0 65706 71152 +
2 domain predictions
 –
Lj0g3v0002119.2
n.a. PREDICTED: rho GTPase-activating protein gacA-like isoform X2 [Cicer arietinum] gi|502145805|ref|XP_004506186.1| chr0 669520 677708 -
2 domain predictions
 –
Lj0g3v0008839.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Glycine max] gi|356517903|ref|XP_003527625.1| chr0 3594790 3597374 +
2 domain predictions
 –
Lj0g3v0011919.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357471389|ref|XP_003605979.1| chr0 4518757 4519440 -
2 domain predictions
 –
Lj0g3v0013569.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356495069|ref|XP_003516403.1| chr0 5132444 5135578 -
2 domain predictions
 –
Lj0g3v0013579.1
n.a. PREDICTED: receptor-like protein 12-like [Cicer arietinum] gi|502177353|ref|XP_004516064.1| chr0 5132499 5135598 -
2 domain predictions
 –
Lj0g3v0019189.1
n.a. PREDICTED: probable inactive receptor kinase RLK902-like [Cicer arietinum] gi|502163215|ref|XP_004512763.1| chr0 7588157 7590806 +
2 domain predictions
 –
Lj0g3v0019209.1
n.a. PREDICTED: probable inactive receptor kinase RLK902-like [Cicer arietinum] gi|502163215|ref|XP_004512763.1| chr0 7596646 7599369 -
2 domain predictions
 –
Lj0g3v0020169.1
n.a. PREDICTED: receptor-like protein 12-like [Cicer arietinum] gi|502147282|ref|XP_004506724.1| chr0 8075083 8078449 +
2 domain predictions
 –
Lj0g3v0020179.1
n.a. n.a. chr0 8075083 8089893 -
2 domain predictions
 –
Lj0g3v0020189.1
n.a. PREDICTED: receptor-like protein 12-like [Cicer arietinum] gi|502147282|ref|XP_004506724.1| chr0 8087309 8089893 +
2 domain predictions
 –
Lj0g3v0022029.1
n.a. Kinase-like protein [Medicago truncatula] gi|357491853|ref|XP_003616214.1| chr0 8901816 8902952 +
2 domain predictions
 –
Lj0g3v0022039.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Cicer arietinum] gi|502096667|ref|XP_004490803.1| chr0 8902899 8903116 +
2 domain predictions
 –
Lj0g3v0024489.1
n.a. F-box family protein [Medicago truncatula] gi|357505507|ref|XP_003623042.1| chr0 9768409 9770188 +
2 domain predictions
 –
Lj0g3v0042849.1
n.a. Kinase-like protein [Medicago truncatula] gi|357484475|ref|XP_003612525.1| chr0 14081007 14083549 +
2 domain predictions
 –
Lj0g3v0043799.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase ERECTA-like [Glycine max] gi|356541594|ref|XP_003539259.1| chr0 14384170 14387274 -
2 domain predictions
 –
Lj0g3v0044659.1
n.a. TMV resistance protein N [Medicago truncatula] gi|357509247|ref|XP_003624912.1| chr0 14750573 14751579 -
2 domain predictions
 –
Lj0g3v0044659.2
n.a. TMV resistance protein N [Medicago truncatula] gi|357505213|ref|XP_003622895.1| chr0 14750573 14751394 -
2 domain predictions
 –
Lj0g3v0044789.1
n.a. PREDICTED: TMV resistance protein N-like isoform X3 [Cicer arietinum] gi|502147467|ref|XP_004506794.1| chr0 14769869 14770108 +
2 domain predictions
 –
Lj0g3v0044809.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356506778|ref|XP_003522153.1| chr0 14770084 14770464 +
2 domain predictions
 –
Lj0g3v0044919.1
n.a. TMV resistance protein N [Medicago truncatula] gi|357509247|ref|XP_003624912.1| chr0 14775594 14782094 +
2 domain predictions
 –
Lj0g3v0044929.1
n.a. TMV resistance protein N [Medicago truncatula] gi|357505213|ref|XP_003622895.1| chr0 14778850 14782486 +
2 domain predictions
 –
Lj0g3v0045059.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502091202|ref|XP_004489475.1| chr0 14809885 14814337 +
2 domain predictions
 –
Lj0g3v0047499.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357493209|ref|XP_003616893.1| chr0 15886067 15893084 -
2 domain predictions
 –
Lj0g3v0050299.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g63710-like [Glycine max] gi|356527105|ref|XP_003532154.1| chr0 17090362 17095739 +
2 domain predictions
 –
Lj0g3v0050609.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357493209|ref|XP_003616893.1| chr0 17224612 17227251 -
2 domain predictions
 –
Lj0g3v0055039.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Cicer arietinum] gi|502097475|ref|XP_004491002.1| chr0 17639362 17641296 +
2 domain predictions
 –
Lj0g3v0062659.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 21101761 21102390 -
2 domain predictions
 –
Lj0g3v0062949.1
n.a. n.a. chr0 21229427 21232228 +
2 domain predictions
 –
Lj0g3v0064119.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 22003038 22014728 -
2 domain predictions
 –
Lj0g3v0064119.3
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 22003038 22014728 -
2 domain predictions
 –
Lj0g3v0065639.2
n.a. PREDICTED: somatic embryogenesis receptor kinase 1-like [Glycine max] gi|356576127|ref|XP_003556185.1| chr0 22860880 22867426 -
2 domain predictions
 –
Lj0g3v0066329.1
n.a. PREDICTED: leucine-rich repeat protein lrrA-like [Glycine max] gi|356563459|ref|XP_003549980.1| chr0 23306016 23308882 +
2 domain predictions
 –
Lj0g3v0066349.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Cicer arietinum] gi|502134366|ref|XP_004502093.1| chr0 23322310 23323491 +
2 domain predictions
 –
Lj0g3v0067549.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 1-like [Glycine max] gi|356516754|ref|XP_003527058.1| chr0 23998624 24003883 -
2 domain predictions
 –
Lj0g3v0067549.2
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 1-like [Glycine max] gi|356516754|ref|XP_003527058.1| chr0 23998624 24003883 -
2 domain predictions
 –
Lj0g3v0073579.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840-like [Glycine max] gi|356551958|ref|XP_003544339.1| chr0 27615994 27623359 +
2 domain predictions
 –
Lj0g3v0073579.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840-like isoform X1 [Cicer arietinum] gi|502096414|ref|XP_004490730.1| chr0 27615994 27623359 +
2 domain predictions
 –
Lj0g3v0073579.3
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840-like [Glycine max] gi|356551958|ref|XP_003544339.1| chr0 27615994 27623359 +
2 domain predictions
 –
Lj0g3v0075369.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Cicer arietinum] gi|502135214|ref|XP_004502257.1| chr0 28565917 28573472 +
2 domain predictions
 –
Lj0g3v0075849.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357490913|ref|XP_003615744.1| chr0 28859672 28863305 +
2 domain predictions
 –
Lj0g3v0077509.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356551688|ref|XP_003544206.1| chr0 29748259 29748644 +
2 domain predictions
 –
Lj0g3v0077519.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356561444|ref|XP_003548991.1| chr0 29748725 29749878 +
2 domain predictions
 –
Lj0g3v0078799.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357513193|ref|XP_003626885.1| chr0 30375476 30377600 -
2 domain predictions
 –
Lj0g3v0086719.1
n.a. PREDICTED: somatic embryogenesis receptor kinase 4-like [Glycine max] gi|356559929|ref|XP_003548248.1| chr0 35046088 35050220 -
2 domain predictions
 –
Lj0g3v0087049.1
n.a. receptor-like protein kinase 2 precursor [Glycine max] gi|351721253|ref|NP_001237715.1| chr0 35240324 35244693 -
2 domain predictions
 –