Domain Predictions — View

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IPR011250

Source: InterPro

Description

IPR011250 is a Outer membrane protein/outer membrane enzyme PagP, beta-barrel.

<p>This entry represents a transmembrane β(8,10)-barrel found in outer membrane proteins such as OmpA, OmpX and NspA, and in the outer membrane enzyme PagP [[cite:PUB00035651]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v1828680.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Oxygen evolving enhancer protein [Medicago truncatula] gi\|357483147\|ref\|XP_003611860.1\|	Domains G3DSA:2.40.160.30 G3DSA:3.30.2050.10 IPR002628 IPR011250 NON_CYTOPLASMIC_DOMAIN PF01716 PTHR34058 PTHR34058:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF56925 SignalP-TM_GRAM_POSITIVE	14
Lj4g3v0877710.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Glycine max] gi\|356559442\|ref\|XP_003548008.1\|	Domains G3DSA:2.40.160.30 G3DSA:3.30.2050.10 IPR002628 IPR011250 PF01716 PTHR34058 PTHR34058:SF1 SSF56925	8
LotjaGi2g1v0396500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Oxygen-evolving enhancer protein 1; TAIR: AT3G50820.1 photosystem II subunit O-2; Swiss-Prot: sp\|P14226\|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic; TrEMBL-Plants: tr\|I3SU29\|I3SU29_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0396500	Domains G3DSA:2.40.160.30 G3DSA:3.30.2050.10 IPR002628 IPR011250 NON_CYTOPLASMIC_DOMAIN PF01716 PTHR34058 PTHR34058:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF56925 SignalP-TM	14
LotjaGi4g1v0111900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Oxygen-evolving enhancer protein 1; TAIR: AT3G50820.1 photosystem II subunit O-2; Swiss-Prot: sp\|P14226\|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic; TrEMBL-Plants: tr\|I1MNK0\|I1MNK0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0111900	Domains G3DSA:2.40.160.30 G3DSA:3.30.2050.10 IPR002628 IPR011250 PF01716 PTHR34058 PTHR34058:SF2 SSF56925	8
LotjaGi4g1v0112700_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Oxygen-evolving enhancer protein 1; TAIR: AT3G50820.1 photosystem II subunit O-2; Swiss-Prot: sp\|P14226\|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic; TrEMBL-Plants: tr\|A0A0L9T5I1\|A0A0L9T5I1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0112700_LC	Domains G3DSA:2.40.160.30 IPR002628 IPR011250 PF01716 PTHR34058 PTHR34058:SF7 SSF56925	7
LotjaGi4g1v0112700_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Oxygen-evolving enhancer protein 1; TAIR: AT3G50820.1 photosystem II subunit O-2; Swiss-Prot: sp\|P14226\|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic; TrEMBL-Plants: tr\|A0A0L9T5I1\|A0A0L9T5I1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0112700_LC	Domains G3DSA:2.40.160.30 IPR002628 IPR011250 PF01716 PTHR34058 PTHR34058:SF7 SSF56925	7
LotjaGi4g1v0112800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Oxygen-evolving enhancer protein 1; TAIR: AT5G66570.1 PS II oxygen-evolving complex 1; Swiss-Prot: sp\|P14226\|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic; TrEMBL-Plants: tr\|C6TKL8\|C6TKL8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0112800_LC	Domains G3DSA:2.40.160.30 G3DSA:3.30.2050.10 IPR002628 IPR011250 PF01716 PTHR34058 PTHR34058:SF2 SSF56925 mobidb-lite	9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29