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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0002149 |
| Transcript ID | Lj0g3v0002149.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 14 | 14 | – | – | |
| Phobius | 1 | 28 | 28 | – | – | |
| PANTHER | 2 | 543 | 542 | 3.50E-279 | – | |
| PANTHER | 2 | 543 | 542 | 3.50E-279 | – | |
| Phobius | 15 | 23 | 9 | – | – | |
| ProSiteProfiles | 18 | 53 | 36 | 5.283 | ||
| Phobius | 24 | 28 | 5 | – | – | |
| Phobius | 29 | 547 | 519 | – | – | |
| ProSiteProfiles | 54 | 88 | 35 | 7.465 | ||
| Gene3D | 71 | 176 | 106 | 6.10E-07 | ||
| Pfam | 88 | 136 | 49 | 2.40E-14 | ||
| ProSiteProfiles | 89 | 123 | 35 | 11.444 | ||
| TIGRFAM | 91 | 125 | 35 | 5.30E-07 | ||
| ProSiteProfiles | 124 | 158 | 35 | 10.907 | ||
| TIGRFAM | 126 | 159 | 34 | 2.20E-06 | ||
| Pfam | 159 | 207 | 49 | 4.40E-11 | ||
| ProSiteProfiles | 159 | 193 | 35 | 10.665 | ||
| TIGRFAM | 161 | 188 | 28 | 2.70E-05 | ||
| ProSiteProfiles | 194 | 228 | 35 | 11.093 | ||
| TIGRFAM | 196 | 229 | 34 | 8.30E-08 | ||
| Pfam | 228 | 277 | 50 | 3.50E-18 | ||
| ProSiteProfiles | 229 | 263 | 35 | 11.29 | ||
| TIGRFAM | 231 | 265 | 35 | 3.20E-07 | ||
| ProSiteProfiles | 264 | 298 | 35 | 13.285 | ||
| TIGRFAM | 266 | 300 | 35 | 1.40E-09 | ||
| Pfam | 295 | 326 | 32 | 1.20E-07 | ||
| ProSiteProfiles | 299 | 333 | 35 | 11.762 | ||
| TIGRFAM | 301 | 335 | 35 | 4.50E-06 | ||
| Gene3D | 302 | 465 | 164 | 6.10E-07 | ||
| Pfam | 333 | 382 | 50 | 2.90E-18 | ||
| ProSiteProfiles | 334 | 368 | 35 | 13.197 | ||
| TIGRFAM | 337 | 370 | 34 | 1.40E-11 | ||
| ProSiteProfiles | 369 | 403 | 35 | 11.893 | ||
| TIGRFAM | 371 | 401 | 31 | 1.00E-08 | ||
| Pfam | 404 | 452 | 49 | 1.10E-17 | ||
| ProSiteProfiles | 404 | 438 | 35 | 12.726 | ||
| TIGRFAM | 406 | 439 | 34 | 1.30E-07 | ||
| ProSiteProfiles | 439 | 473 | 35 | 11.345 | ||
| TIGRFAM | 441 | 474 | 34 | 2.00E-05 | ||
| ProSiteProfiles | 474 | 508 | 35 | 12.156 | ||
| Pfam | 474 | 521 | 48 | 2.60E-12 | ||
| TIGRFAM | 477 | 509 | 33 | 8.20E-08 | ||
| ProSiteProfiles | 509 | 543 | 35 | 10.435 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0002149.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0002149.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.