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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0008599 |
| Transcript ID | Lj0g3v0008599.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 9 [Glycine max] gi|356543758|ref|XP_003540327.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 245 | 245 | 6.00E-101 | ||
| ProSiteProfiles | 1 | 211 | 211 | 25.558 | ||
| Phobius | 1 | 22 | 22 | – | – | |
| SignalP | 1 | 22 | 22 | – | – | |
| PANTHER | 1 | 245 | 245 | 6.30E-181 | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| PANTHER | 1 | 245 | 245 | 6.30E-181 | – | |
| Phobius | 6 | 17 | 12 | – | – | |
| Phobius | 18 | 22 | 5 | – | – | |
| Gene3D | 20 | 245 | 226 | 1.60E-90 | ||
| Phobius | 23 | 245 | 223 | – | – | |
| SUPERFAMILY | 25 | 227 | 203 | 4.86E-62 | ||
| Pfam | 28 | 203 | 176 | 3.20E-56 | ||
| PRINTS | 55 | 73 | 19 | 9.30E-06 | ||
| PRINTS | 113 | 126 | 14 | 9.30E-06 | ||
| PRINTS | 131 | 148 | 18 | 9.30E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Biological process | Xyloglucan metabolic process | The chemical reactions and pathways involving xyloglucan, the cross-linking glycan composed of (1->4)-beta-D-glucan backbone substituted at regular intervals with beta-D-xylosyl-(1->6) residues, which is present in the primary cell wall of most higher plants. | ||
| Molecular function | Xyloglucan:xyloglucosyl transferase activity | Catalysis of the cleavage of a beta-(1->4) bond in the backbone of a xyloglucan and transfers the xyloglucanyl segment on to O-4 of the non-reducing terminal glucose residue of an acceptor, which can be a xyloglucan or an oligosaccharide of xyloglucan. | ||
| Biological process | Cell wall biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cell wall. Includes biosynthesis of constituent macromolecules, such as proteins and polysaccharides, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component. A cell wall is the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis. |
Expression pattern of Lj0g3v0008599.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0008599.1, powered by CORGI.
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