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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0008789 |
| Transcript ID | Lj0g3v0008789.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Nitroreductase family protein isoform 1 [Theobroma cacao] gi|508725160|gb|EOY17057.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 40 | 40 | – | – | |
| Phobius | 1 | 12 | 12 | – | – | |
| Phobius | 1 | 28 | 28 | – | – | |
| Phobius | 13 | 23 | 11 | – | – | |
| Phobius | 24 | 28 | 5 | – | – | |
| MobiDBLite | 28 | 68 | 41 | – | – | |
| Phobius | 29 | 636 | 608 | – | – | |
| Pfam | 136 | 289 | 154 | 3.30E-05 | ||
| Gene3D | 138 | 289 | 152 | 4.90E-04 | ||
| CDD | 139 | 297 | 159 | 1.79E-22 | – | |
| SUPERFAMILY | 168 | 289 | 122 | 2.28E-07 | ||
| PANTHER | 377 | 633 | 257 | 2.00E-160 | – | |
| PANTHER | 377 | 633 | 257 | 2.00E-160 | – | |
| CDD | 460 | 616 | 157 | 6.26E-28 | – | |
| SUPERFAMILY | 479 | 494 | 16 | 3.00E-08 | ||
| Gene3D | 482 | 494 | 13 | 4.50E-04 | ||
| Gene3D | 529 | 617 | 89 | 4.50E-04 | ||
| SUPERFAMILY | 529 | 620 | 92 | 3.00E-08 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. |
Expression pattern of Lj0g3v0008789.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0008789.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.