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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0020719 |
| Transcript ID | Lj0g3v0020719.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: expansin-A4-like [Glycine max] gi|356558059|ref|XP_003547326.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 7 | 7 | – | – | |
| Phobius | 1 | 25 | 25 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| PANTHER | 2 | 134 | 133 | 2.30E-98 | – | |
| PANTHER | 2 | 134 | 133 | 2.30E-98 | – | |
| TMHMM | 3 | 25 | 23 | – | – | |
| Phobius | 8 | 19 | 12 | – | – | |
| Phobius | 20 | 25 | 6 | – | – | |
| Gene3D | 21 | 133 | 113 | 1.70E-36 | ||
| Phobius | 26 | 134 | 109 | – | – | |
| PRINTS | 35 | 50 | 16 | 6.90E-28 | ||
| SUPERFAMILY | 35 | 134 | 100 | 5.23E-34 | ||
| PRINTS | 53 | 71 | 19 | 6.90E-28 | ||
| ProSiteProfiles | 54 | 134 | 81 | 21.474 | ||
| PRINTS | 66 | 80 | 15 | 7.00E-24 | ||
| Pfam | 71 | 117 | 47 | 3.70E-11 | ||
| SMART | 71 | 134 | 64 | 7.00E-25 | ||
| PRINTS | 75 | 93 | 19 | 6.90E-28 | ||
| PRINTS | 93 | 104 | 12 | 7.00E-24 | ||
| PRINTS | 107 | 117 | 11 | 7.00E-24 | ||
| PRINTS | 126 | 134 | 9 | 7.00E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Extracellular region | The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. | ||
| Biological process | Plant-type cell wall organization | A process that results in the assembly and arrangement of constituent parts of the cellulose and pectin-containing cell wall, or in the disassembly of the cellulose and pectin-containing cell wall. This process is carried out at the cellular level. An example of this process is found in Arabidopsis thaliana. |
Expression pattern of Lj0g3v0020719.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0020719.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.