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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0077119 |
| Transcript ID | Lj0g3v0077119.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: aspartic proteinase-like [Glycine max] gi|356555682|ref|XP_003546159.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| PANTHER | 6 | 313 | 308 | 6.10E-232 | – | |
| PANTHER | 6 | 313 | 308 | 6.10E-232 | ||
| Phobius | 7 | 19 | 13 | – | – | |
| TMHMM | 7 | 26 | 20 | – | – | |
| SUPERFAMILY | 14 | 316 | 303 | 1.39E-98 | ||
| Phobius | 20 | 24 | 5 | – | – | |
| Phobius | 25 | 471 | 447 | – | – | |
| Gene3D | 79 | 167 | 89 | 2.50E-31 | ||
| Pfam | 87 | 471 | 385 | 1.00E-111 | ||
| ProSiteProfiles | 88 | 471 | 384 | 61.614 | ||
| PRINTS | 94 | 114 | 21 | 1.50E-19 | ||
| ProSitePatterns | 103 | 114 | 12 | – | ||
| Gene3D | 168 | 318 | 151 | 2.00E-71 | ||
| PRINTS | 240 | 253 | 14 | 1.50E-19 | ||
| ProSitePatterns | 290 | 301 | 12 | – | ||
| PRINTS | 290 | 301 | 12 | 1.50E-19 | ||
| ProSiteProfiles | 318 | 358 | 41 | 12.622 | ||
| Gene3D | 319 | 355 | 37 | 4.30E-09 | ||
| SUPERFAMILY | 320 | 421 | 102 | 9.99E-29 | ||
| Pfam | 321 | 354 | 34 | 4.60E-12 | ||
| ProSiteProfiles | 382 | 423 | 42 | 12.107 | ||
| Gene3D | 383 | 426 | 44 | 7.90E-10 | ||
| Pfam | 385 | 421 | 37 | 1.40E-15 | ||
| PANTHER | 414 | 471 | 58 | 6.10E-232 | ||
| PANTHER | 414 | 471 | 58 | 6.10E-232 | – | |
| SUPERFAMILY | 421 | 471 | 51 | 1.39E-98 | ||
| Gene3D | 429 | 471 | 43 | 2.00E-71 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Biological process | Lipid metabolic process | The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. |
Expression pattern of Lj0g3v0077119.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0077119.1, powered by CORGI.
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