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Lj0g3v0124339.1

Overview

Field Value
Gene ID Lj0g3v0124339
Transcript ID Lj0g3v0124339.1
Lotus japonicus genome version MG20 v3.0
Description ATPase subunit 1 (mitochondrion) [Lotus japonicus] gi|372450305|ref|YP_005090487.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
CDD
cd01132
1 274 274 0
IPR033732
Gene3D
G3DSA:3.40.50.300
1 278 278 3.60E-119
IPR027417
SUPERFAMILY
SSF52540
1 277 277 7.31E-96
IPR027417
PANTHER
PTHR15184:SF3
1 374 374 2.20E-262
IPR005294
Hamap
MF_01346
1 408 408 37.094
IPR005294
TIGRFAM
TIGR00962
1 376 376 4.50E-200
IPR005294
PANTHER
PTHR15184
1 374 374 2.20E-262 –
Pfam
PF00006
47 271 225 1.40E-73
IPR000194
ProSitePatterns
PS00152
262 271 10 –
IPR020003
Pfam
PF00306
278 374 97 1.60E-40
IPR000793
Gene3D
G3DSA:1.20.150.20
280 376 97 1.60E-46 –
SUPERFAMILY
SSF47917
280 380 101 2.41E-39 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0015986
Biological process ATP synthesis coupled proton transport The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
Subterm of
GO:0032559
Molecular function Adenyl ribonucleotide binding Interacting selectively and non-covalently with an adenyl ribonucleotide, any compound consisting of adenosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose moiety.
Subterm of
GO:0045261
Cellular component Proton-transporting ATP synthase complex, catalytic core F(1) The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled.
Subterm of
Part of
GO:0046933
Molecular function Proton-transporting ATP synthase activity, rotational mechanism Enables the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj0g3v0124339.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0124339.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.