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| Field | Value |
|---|---|
| Gene ID | Lj1g3v5061360 |
| Transcript ID | Lj1g3v5061360.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | RecName: Full=Ion channel CASTORgi|58430443|dbj|BAD89019.1| ion channel [Lotus japonicus] gi|62286596|sp|Q5H8A6.1|CASTO_LOTJA |
| Working Lj name | LjCastor |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 55 | 55 | – | – | |
| Phobius | 1 | 96 | 96 | – | – | |
| PANTHER | 5 | 128 | 124 | 0 | – | |
| PANTHER | 5 | 128 | 124 | 0 | – | |
| TMHMM | 97 | 116 | 20 | – | – | |
| Phobius | 97 | 116 | 20 | – | – | |
| Phobius | 117 | 168 | 52 | – | – | |
| PANTHER | 164 | 703 | 540 | 0 | – | |
| PANTHER | 164 | 703 | 540 | 0 | – | |
| SUPERFAMILY | 168 | 306 | 139 | 5.89E-05 | – | |
| TMHMM | 169 | 191 | 23 | – | – | |
| Phobius | 169 | 188 | 20 | – | – | |
| Phobius | 189 | 226 | 38 | – | – | |
| TMHMM | 226 | 248 | 23 | – | – | |
| Phobius | 227 | 247 | 21 | – | – | |
| Phobius | 248 | 278 | 31 | – | – | |
| TMHMM | 279 | 301 | 23 | – | – | |
| Phobius | 279 | 299 | 21 | – | – | |
| Phobius | 300 | 853 | 554 | – | – | |
| Gene3D | 313 | 457 | 145 | 1.70E-21 | ||
| Pfam | 463 | 560 | 98 | 1.80E-40 | ||
| Gene3D | 528 | 555 | 28 | 4.80E-04 | ||
| PANTHER | 722 | 853 | 132 | 0 | – | |
| PANTHER | 722 | 853 | 132 | 0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Potassium ion transport | The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Cation transmembrane transporter activity | Enables the transfer of cation from one side of a membrane to the other. |
Expression pattern of Lj1g3v5061360.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v5061360.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.