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Lj6g3v0145980.1

Overview

Field Value
Gene ID Lj6g3v0145980
Transcript ID Lj6g3v0145980.1
Lotus japonicus genome version MG20 v3.0
Description Sucrose-phosphatase [Medicago truncatula] gi|357439171|ref|XP_003589862.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12526:SF2
1 385 385 5.90E-159 –
PANTHER
PTHR12526
1 385 385 5.90E-159 –
SUPERFAMILY
SSF56784
11 217 207 4.50E-17
IPR023214
TIGRFAM
TIGR01485
59 236 178 8.80E-77
IPR012847
Pfam
PF05116
59 235 177 5.80E-67
IPR006380
TIGRFAM
TIGR01484
63 190 128 5.10E-15
IPR006379
TIGRFAM
TIGR01482
65 231 167 6.30E-41 –
Gene3D
G3DSA:3.90.1070.10
76 143 68 2.60E-28 –
Gene3D
G3DSA:3.40.50.1000
144 234 91 2.70E-16
IPR023214
Pfam
PF08472
236 367 132 2.10E-50
IPR013679
SUPERFAMILY
SSF54427
256 384 129 3.07E-24
IPR032710
Gene3D
G3DSA:3.10.450.50
258 384 127 2.00E-04
IPR032710

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0005986
Biological process Sucrose biosynthetic process The chemical reactions and pathways resulting in the formation of sucrose, the disaccharide fructofuranosyl-glucopyranoside.
Subterm of
GO:0050307
Molecular function Sucrose-phosphate phosphatase activity Catalysis of the reaction: sucrose 6F-phosphate + H2O = sucrose + phosphate.
Subterm of

Genome browser

LORE1 insertions 42

Expression data

Expression pattern

Expression pattern of Lj6g3v0145980.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v0145980.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.