Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0093300.1

Overview

Field Value
Gene ID LotjaGi1g1v0093300
Transcript ID LotjaGi1g1v0093300.1
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description PfkB family carbohydrate kinase; TAIR: AT1G66430.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q9C524|SCRK6_ARATH Probable fructokinase-6, chloroplastic; TrEMBL-Plants: tr|C6TGN8|C6TGN8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0093300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:13664893..13670914) extracted from Lotus japonicus Gifu genome v1.2.

AACCGCCACAAATTGACTTCGTGCATTACACGAGAAATCTGTCTCGTGCACTATGGCATTTTCCTTATGACAAATGTTAA CAGCTGCTTCACCCTTTGTCTAAAACACTTTCAAGTTTCAACAACATTATTCTCACCTGGCCAGCGTCAGCACTAAGCAG ACCAAAATCCAAATGGACAATAAATCTGTTTACTGAAAACAAATGTCATCTTGATTGGGAATTAACAGCTATCACATAGT ACTAATGCAGAAAAACTGCCAATAGAGTACTACATATTTGCAGAGTTTTGCTTTCTCCGCAACAAGCCATACTCGTGTTT GCATTCTCCTTCTTCGCTAAATCCAATTTCCACGCAAACCTCATCATCAATTCTCACGCCTCTGGCAGTGACACTGTACC AATATAGTAATCAGATTCACATGTGTAGTAGTGATTCCTAGAAGTGATTCAGAGAGAGAAGAGATTTTCACAAATCAACA CTCTTCTAAGTTCTAACTAAGCTTGTGTAGTAGTGATTTTTATCTTTTGAGATCGATGGCTCTTCACTGTGCTGCTTTCT GCTTCAGAAGCGTGGCTTCTCACCCTACTGGTTCAGTCAAGTTCGGTCAGCCCACTATCAAAGCTTCTTCTGCCTTTGCA TGCCCTTCTTCCCCTCCTCATATCAGATTGAATGTTAAAGGTAATGGAAATCTGGGTCGTCCTCAAGTTTTTGTCTTGGT GTATATACTTTGATGTTCATGGGTGAAGAGCCATAGCCATAGCTCTGTGTTGTTTTCTAATTCGAACATTTTGTCCTAAT TTTGCGGATAACAGATCCCTTTTAGCTAGAAGCTTCAAAATTGAAGAAATGTGCTTCTACTTTTTGCTTGATTATTTAGT GTGTGGTCAGTTTTCGATTTTTCAAAATCCAAATCTTGTGCATGTTGATCATTTGGTACAAAAAAAGTGTTGCAAAGATG AGCAACCACTTTCTATTTTGGAATACCTTTTTTGCAACTAGGGGAGGAGGATGCAATTTTATCTTCAGTTAGACTTGTGT GTTTGAGCTTTTAATGTAAAAGATTCTGTTTTTTCTTTCTTTAGTTTCACTTCTGGGAAGTATGAAGTTATGAGCATATT TTTACTTGTAAGGTTTTTTTTGGTTGTTGTAGGAAAGGCATCTCCTGGTTATGGGACACTTGAAACAAAGGAATCACCTC TTGTGGTTTGTTTTGGGGAAATGCTAATTGATTTCGTCCCAACTATCAGTGGCCTTTCTTTGGCTGATGCACCTGCATTT AAAAAGGCTCCAGGGGGTGCTCCTGCTAATGTTGCTGTTGGTATAGCCCGATTAGGAGGTTCATCTGCTTTTATCGGAAA GGTATTGTAATGTTGTATAAATACTTGTCGAGGTTCGTTCTATACTTATGGTAGGGGTAGGGAGCATTGTACTTTAAAGT GCAACTTAGGCATAGAGCAAATATTAACCTGTGCTCAAACTTGAAATCGTCCCCTGCATCTCATATTGTTGTGAAGCCAA ACTTTGCTCAAAAGAAAGGGCTTGCCTTGTTATTGTTAATCCATAATGTTTGTTTCTGGAAGTAGGTTTTATGAAAAAGA AGATAAGTTTGATCAAAAGTTAACTTCATCATTTTGGTTAATGAAAGATTTATGGGACATTTTGCTAGTCCTTGAAATTA TTGTCCCTCAATAATGAAATGGGGGACTATGTTAGTCCCTCGATCAGCCTCCGTTAGAAACACCACTAATAGATTCGGAT ATGACCTCTTAAGTGCTAAAGTTGGGCACAACTGTTTTGATTTCCTTTTTTCCTTACATGTGATACTAATACACAGTGTC ATGGTGGCTGTAGGTGGGGTTGTGCATTTGTTATTATTTTTGCATGCTGCTGTGTGTGGCTCATGGCTTCTATTTTTTGG AGAATAGGTCTTTGTCACAGAGGTATGTGGGTTTGGGTGGTTTCTAGGCTTAGTTGTTATGGGAAGGTGTGACAAATCCT TTTTTTTGGGAGGAGGGAGGGGGGTGGGTACTAAATTATGGGAATGGTAACCTAAGCAAGTGGTGCAAAATGTCTGCAAG TGGTTTGAAATTGGCTTTTGGTTATTTCATTGTCTGTCTAGGCTCTAGAGGTTGCTATACGTGATGTGTTTCAAGCTAGG CAGTTTTAGCTTGTTCTAATCACCCAATTCTCTAATTGCGGTGGGTTTGTATTGGAAATTCTTTATTGTTATGTTTAGAA TCTGGGTTAATGAAATTAATTTTGGATTTTCTGATTCATGGTTCTTAATTAGGCGTGTTGACCTGGCTTGAGGCTTAGTT ACAGGGTTATTTGTGCATTTTTAATGAACAAAAACTAATGGCCGACTGAGACCAAATTAAGCAAGCAAACAAATTTTAAC AATACAATGATGTTACTCAGAACAACATTGAGACATAGTCACATAGATAGAATCATAACTTAACCCCCATTTTTGTTTCT CAAAGATTCATATGTCATCAGATTTATATGTTTAGGTGGCATTTCCACATGGATGGTTAATTGGTATTTAACGGTATCAG CATTGAATGAGCCCTGTAGAACCCTTGATCAAATAATGAGCAGGAATTAGATTGTTCTATAATCCTGTGCTATTAATAAG CACTGGTATGCAGTTAGGGTTTTTGTCACTTTTGGCAGTTTCCTATTTCAACTAGCAGCAATATGTGAATATTCATATGA ACTTAGGAAAGGAGCTCCTTAGATTCTGATGACTGAATCTGCAAGTATTAAATTTGTTCTAGAGGTCAGCAATCTATAAA AGAAACAATCATGTTTGTTTCTGAAGCTGAAATCTGGTTGTGAGAAAATGTATAATTTCTTCAGTACTCATCTGAAAATC AGAGGCCTCTTAGGCCTTATCATTAGCATTTAGAATCATCCAAGTTTATGCAATCTGAACAGGTTGGTGAGGATGAATTT GGATATATGCTTGCTGATATACTCAAGGAAAATAATGTAAACAACCAAGGGATGCGATTTGACCCTGGTGCTCGTACTGC TTTGGCATTTGTTACACTGAGGAATGATGGAGAACGAGAGTTCATGTTTTATCGTAATCCCAGTGCTGATATGCTGCTCC AAGAAGATGAACTCGATTTGGACTTAATTAGAAAGGTAAAGCCAAAGCTACAACTCATGCTGGTCAAACTAAAACATAAT GTAGTAAAGGAAAATCAAACCTCTATTGAACAAATTATTCAGTATGCTCTCTGTAACTCTGTTGCACTTCTCTCAATTAG TCTAGCTTTGTTCAGTTACTCAAAATCACTTCATCAACTGGCAGTTTGTGGGTTTTTTTAAACATAATGACTAAATGTAC CTAAAGTAAACCATCATTTTTTGATATTCCTGCTTCTGTAGTTTAAGAACCCCCTTTCAGGTTTCCTTAATATCACAGAA AAAACTTCAAAATTCTTGCCGAGTCTATGTTCTTTTAATGTTTTTCGCATTGACTCTATACTTAATTCATATATTATTGT TATAACATTGTTCTATTATCTCTTTATGGCAGGCCAAGATCTTCCATTATGGTTCTATAAGTCTTATAACAGAACCATGC AAATCAGCACATATAGCTGCAGCAAAGGCTGCGAAAGATGCTGGTGTAGTCCTGTCTTATGACCCTAACCTGAGGCTTCC TTTATGGCCTTCTGCGGATAGTGCTAGAGAAGGAATTCTGAGTATATGGGAGACTGCAGATATCATTAAGGTCCCTCTCC TATGAACAGAGCAGAAATATATGTTCTTTAGTTCCCAACAGAAGTTTCTTGTTCTCTTTTTCTAGAATACAAATTACAGT GGAATGTAAAATAAGTGACAATACCATCTCTGACAGAATCAATCTGATATGTTTTTAGATAAGTGAAGAAGAGATCTCTT TTCTCACAAAGGGTGAAGACCCGTATGACGATGCGGTTGTTCATAAATTATTCCATCCAAACCTCAAGCTACTTCTGGTG ACTGAAGGTGCAGAAGGCTGCAGGTATTATACCAAGGTATGCCTTCCAAAAATACTATTTCTGGAATCCTTTTCATCTCA TGCTAATATTTGTTTTATGGCTATCTCTGATGTATCTTCAAAAGTGTAACTGTAACACTTATGAAATCTACTGCATAAAC TGTACCTTCACATTCCTGTCTGCTTAGGAATTGAAACTGGTTTTTTTCTAGCTCACTAAATTTATTAATGGCTTAATTGC AACTTTGGTCCCTGACATTTACAAAAGCCACGATTTTGGTCCCTCACCTAATTTAATTACAAAAATCGTCCCTCACCTAA CACTTCGTGAACAACGTTGGTCCAACCGTCAATTTTTTAACGGAAGAAGCTTACGTGGCGTCTGAAAGCTTATGTGGAAG TGCCACTGGCGTCATAATCGATTTTTCCTCTCCTCTCGGCTGTTTTTTTTATCTCATAGTGAAGCTTTGCTGTTGGGAGG CCTAGTTGTTGGAACGCTGGGATTGAGGTTGTGTGCTATTCCTCTGAGTTTTTTTGTTGTTTTTTCCTCTGAGATGTAGA GGCATGTGCCTCCCTCTCTCCAGTGGCACTTCCACCTAAGTTTTCAAACACCACATAAGCTTCTTCCGTTAAAAATTTGA CGGTCGGACCAACTTTGTTCACAGAGTGTTAGGTGAGGGACGATTTTTGTAATTAAATTAGGTGAAGGACCAAAATCGTG GCTTTTATAAATGTCAGGGACCAAAGTTGCAATTAAGCCTTTATTAATCGTTTTGCAGTGTTTGGGTTGTTTAGGGGAGA ACATGAGCTGAACACTTGTCTAAAAATCATGAATATTTTCTTTAGAGAAATGCTAACATCTTAGTGAGATCCCAAACATA TTCACTTAAAAAATGTTTTACTAACGTTCTTTCCTCTACCTACTAAGAGAATGTCCTGTTAACCCTATAGCTAGAGTGGA GGCAAAGCAGCCTTGTGGAGATTTGAATTCAAGATCATGTAACCTCTAAAAGAGACTTGGTGCCACTTAAGCTAAGGCTC ATGGGTAATTTGGCTTATCTATTTATTTAATAGGCTGTCAAAGAAACAATATGTAATAATCAGCCTTCTATTGGCTCCAA AGCTAATGTCCTTGATGCGATTCTAGCAGACACGTTAGCTGGATGTTAGAACTGAAAATCATTGAAAAATAATATCAGAG ATATTTTGTTATTAATCAATTTGCTATGTTTGACATCCATATCTTTGTTTAGAAACTAAGCAAAGACCTGAAAAAATTAT TAGTTCGAAATTCTAATAACATTTATGCTGCTTGTTAATGTATTATTGATAACTATGATTTGAAACCTGTCCTATTTTTT CCTTTGCAGGAGTTCAGTGGTAGAGTCATGGGAATGAAGGTGGATGCTGTTGACACCACTGGTGCTGGTGATTCATTTGT GGCTGGAGTATTATCACAATTAGCTGTGGATCTTTCATTAATTCAGGTGAGTATAGTTTGCTTTTGGCATCACACCATCC CAAAAGCTTACTTCAGATAACTGCTTAAACTCATGTGTGGAACATCTATTATTGTTTGAATCATCAAAAGAAAATCTCGG CTTCTTGCATCAATGCTGCAATTTATGTGGCCTTTAACTTGCAGAAAGAGGAACAACTGAGAGATGCTCTCAAATTTGCC AATGTGTGTGGTGCATTGACTGTGACCGAGAGAGGCGCAATTCCAGCATTGCCCACAAGGGAAACTGTTCTGAATGCAAT GCTTAAGCCCGTAGCGTAACTTCACACCCCGATCTCTGTAATTATGTGAAGATTTTTTTTTTTCATTGGAAATCCTTAGG AACTTTCTGTGGGAATGCAATCTATATAATCTTTATTAGGGTTGTTTTGTTTCTGATCATGTGTGATACAGTTGATTTGA CGATATATGATCCTATTTTGGGTTTATCGTCTTTCGATTCACTCTTTTTTTCACGTATGTTATTCTTTACATATATTTTG AATCATAAAATTAAACATTCAC
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0093300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTCTTCACTGTGCTGCTTTCTGCTTCAGAAGCGTGGCTTCTCACCCTACTGGTTCAGTCAAGTTCGGTCAGCCCAC TATCAAAGCTTCTTCTGCCTTTGCATGCCCTTCTTCCCCTCCTCATATCAGATTGAATGTTAAAGGAAAGGCATCTCCTG GTTATGGGACACTTGAAACAAAGGAATCACCTCTTGTGGTTTGTTTTGGGGAAATGCTAATTGATTTCGTCCCAACTATC AGTGGCCTTTCTTTGGCTGATGCACCTGCATTTAAAAAGGCTCCAGGGGGTGCTCCTGCTAATGTTGCTGTTGGTATAGC CCGATTAGGAGGTTCATCTGCTTTTATCGGAAAGGTTGGTGAGGATGAATTTGGATATATGCTTGCTGATATACTCAAGG AAAATAATGTAAACAACCAAGGGATGCGATTTGACCCTGGTGCTCGTACTGCTTTGGCATTTGTTACACTGAGGAATGAT GGAGAACGAGAGTTCATGTTTTATCGTAATCCCAGTGCTGATATGCTGCTCCAAGAAGATGAACTCGATTTGGACTTAAT TAGAAAGGCCAAGATCTTCCATTATGGTTCTATAAGTCTTATAACAGAACCATGCAAATCAGCACATATAGCTGCAGCAA AGGCTGCGAAAGATGCTGGTGTAGTCCTGTCTTATGACCCTAACCTGAGGCTTCCTTTATGGCCTTCTGCGGATAGTGCT AGAGAAGGAATTCTGAGTATATGGGAGACTGCAGATATCATTAAGATAAGTGAAGAAGAGATCTCTTTTCTCACAAAGGG TGAAGACCCGTATGACGATGCGGTTGTTCATAAATTATTCCATCCAAACCTCAAGCTACTTCTGGTGACTGAAGGTGCAG AAGGCTGCAGGTATTATACCAAGGAGTTCAGTGGTAGAGTCATGGGAATGAAGGTGGATGCTGTTGACACCACTGGTGCT GGTGATTCATTTGTGGCTGGAGTATTATCACAATTAGCTGTGGATCTTTCATTAATTCAGAAAGAGGAACAACTGAGAGA TGCTCTCAAATTTGCCAATGTGTGTGGTGCATTGACTGTGACCGAGAGAGGCGCAATTCCAGCATTGCCCACAAGGGAAA CTGTTCTGAATGCAATGCTTAAGCCCGTAGCGTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0093300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MALHCAAFCFRSVASHPTGSVKFGQPTIKASSAFACPSSPPHIRLNVKGKASPGYGTLETKESPLVVCFGEMLIDFVPTI SGLSLADAPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGEDEFGYMLADILKENNVNNQGMRFDPGARTALAFVTLRND GEREFMFYRNPSADMLLQEDELDLDLIRKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADSA REGILSIWETADIIKISEEEISFLTKGEDPYDDAVVHKLFHPNLKLLLVTEGAEGCRYYTKEFSGRVMGMKVDAVDTTGA GDSFVAGVLSQLAVDLSLIQKEEQLRDALKFANVCGALTVTERGAIPALPTRETVLNAMLKPVA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
SIGNAL_PEPTIDE
1 15 15 - –
Phobius
SIGNAL_PEPTIDE_N_REGION
1 1 1 - –
SignalP_GRAM_POSITIVE
SignalP-TM
1 30 30 - –
Phobius
SIGNAL_PEPTIDE_H_REGION
2 10 9 - –
Phobius
SIGNAL_PEPTIDE_C_REGION
11 15 5 - –
Phobius
NON_CYTOPLASMIC_DOMAIN
16 384 369 - –
PANTHER
PTHR43085
59 381 323 2.7E-179 –
PANTHER
PTHR43085:SF30
59 381 323 2.7E-179 –
Gene3D
G3DSA:3.40.1190.20
63 382 320 2.9E-110
IPR029056
Pfam
PF00294
65 371 307 3.0E-79
IPR011611
CDD
cd01167
65 366 302 1.58102E-129 –
SUPERFAMILY
SSF53613
66 378 313 2.96E-89
IPR029056
PRINTS
PR00990
91 110 20 2.4E-7
IPR002139
ProSitePatterns
PS00583
96 120 25 -
IPR002173
PRINTS
PR00990
246 261 16 2.4E-7
IPR002139
PRINTS
PR00990
287 298 12 2.4E-7
IPR002139
ProSitePatterns
PS00584
316 329 14 -
IPR002173

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016301
Molecular function Kinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
Subterm of
GO:0016773
Molecular function Phosphotransferase activity, alcohol group as acceptor Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor).
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0093300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…