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LotjaGi3g1v0512000.1

Overview

Field Value
Gene ID LotjaGi3g1v0512000
Transcript ID LotjaGi3g1v0512000.1
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT1G75820.1 Leucine-rich receptor-like protein kinase family protein; Swiss-Prot: sp|Q9SYQ8|CLV1_ARATH Receptor protein kinase CLAVATA1; TrEMBL-Plants: tr|Q8GRU6|Q8GRU6_LOTJA Non-specific serine/threonine protein kinase; Found in the gene: LotjaGi3g1v0512000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:92910296..92915838) extracted from Lotus japonicus Gifu genome v1.2.

TGGCGAGCTAGCTAGTCTTCATTCTCTTCTCCTTAATTAGGTACAGAATCACTTTCAATTCAATAAAATAATTTACTTTA AAATGCATTGTTGCATGATACACACTTTAATCACATATAGAATACGATTCTGCAATATCTAGTGGATGATCGTGGGAGCA GAGAATTTATGCTTAGTTTGCCTTTTCCACGAGAGTCACAACTATCCCCAGTTATACACACTCCAAAGTGTTCCACGTAA AACAACTTTTCTCCTTTCATTTTATACTCAACAACTTTTTGTTTCATTCCAAAGTGAGACTTATACAAAGCTTAAATTAA ACCTCTGTTACTGGTTACAAAAAGATTTCATGTGTCTTCCCACAAAAGCTAAGTCCACGAGAGAGAGTGGACTTTCACTA GTGGCGCCAAGCATATTACAGTATTATACGCCAGCCACCAAATTATATGTTAACCAATCACATACACTAATTTAGTATAA TCATGATTATAAATAGACACTCAGCATAACAAATGCATGTGGTGTGTGAATTCTGATACCAAGATAAATACGCCAAATGC AAAATACGAAAACAAGAAGCAAGAAGCAACTGAGGAAGAAGCATTAAACAAAATTGAAATGAGAATCAGAGTGTCTTACT TGTTAGTGCTATGTTTTACCTTAATTTGGTTCAGATGGACAGTGGTGTACTCTTCATTCAGTGATCTCGATGCACTGCTA AAGCTCAAAGAATCCATGAAGGGAGCCAAAGCCAAACACCACGCACTCGAAGATTGGAAGTTTTCCACCTCACTCTCAGC ACACTGTTCGTTTTCCGGCGTAACGTGCGACCAGAACTTGCGAGTGGTTGCTCTCAACGTCACGCTGGTTCCGCTTTTCG GCCACCTTCCGCCGGAGATAGGGTTGTTGGAGAAGTTAGAGAATCTCACCATCTCCATGAACAACCTCACTGACCAGCTT CCCTCCGACCTTGCAAGCCTCACCTCCCTCAAGGTCCTCAACATCTCCCACAACCTCTTCTCCGGCCAATTCCCTGGTAA CATCACCGTTGGCATGACGGAGCTCGAGGCCCTTGATGCCTACGACAACAGCTTCTCCGGTCCTCTCCCGGAGGAAATCG TCAAGCTCGAGAAACTCAAGTACCTCCACCTCGCCGGGAACTATTTCTCCGGTACAATACCGGAGAGCTACTCGGAGTTT CAGAGCCTTGAGTTTCTCGGCTTGAACGCAAACAGCTTAACCGGGAGAGTCCCGGAGAGCTTGGCGAAGTTGAAGACGTT GAAGGAACTGCACCTCGGTTACTCGAACGCTTACGAAGGTGGAATCCCGCCGGCGTTCGGTTCCATGGAGAATCTCCGCC TGCTAGAAATGGCTAACTGCAACCTCACCGGCGAGATTCCACCGAGCCTGGGGAATCTAACCAAACTCCACTCCTTATTC GTGCAGATGAACAACCTCACCGGAACCATTCCGCCGGAGCTATCTTCCATGATGAGCCTCATGTCACTGGACCTCTCCAT CAACGACCTCACCGGCGAGATCCCGGAGAGCTTCTCAAAACTGAAGAATCTCACTCTAATGAACTTCTTCCAAAACAAGT TCCGCGGCTCTCTCCCCTCCTTCATCGGCGACCTTCCAAATCTCGAAACGCTTCAGGTTTGGGAGAACAATTTCTCCTTC GTGCTGCCGCACAATCTCGGCGGAAACGGAAGATTCTTATACTTCGACGTCACCAAAAACCACCTCACCGGGTTGATTCC GCCGGATCTATGCAAAAGCGGGAGGTTGAAAACGTTCATCATCACTGATAACTTCTTCCGTGGCCCAATTCCCAAGGGAA TCGGCGAGTGTAGGTCACTCACGAAGATTCGCGTGGCTAACAACTTCCTTGACGGTCCAGTTCCACCAGGGGTTTTCCAA CTGCCTTCCGTTACGATAACGGAATTGAGCAATAACCGCCTCAACGGCGAACTGCCTTCCGTGATTTCAGGCGAATCTCT CGGGACGCTCACGCTTTCCAACAACCTCTTCACCGGAAAAATCCCCGCCGCGATGAAAAACCTCAGAGCGTTGCAGAGCT TATCCCTCGACGCCAATGAGTTCATCGGAGAAATTCCGGGGGGAGTTTTTGAAATCCCAATGCTCACCAAAGTCAACATC AGCGGCAACAACCTCACAGGTCCGATCCCAACGACGATCACTCACCGTGCTTCTCTGACGGCGGTAGACCTCAGCCGGAA CAACCTCGCCGGCGAGGTTCCGAAGGGGATGAAGAATTTGATGGACTTAAGCATTCTGAATCTCTCACGCAACGAGATTT CTGGACCGGTTCCTGATGAGATTCGATTCATGACTAGCCTCACGACGCTGGATCTCTCGAGTAACAATTTCACCGGAACA GTCCCCACCGGCGGCCAGTTTCTGGTATTCAACTACGACAAGACGTTCGCCGGAAACCCGAACCTCTGTTTCCCTCACAG AGCATCCTGTCCTTCTGTCCTCTACGACTCGTTAAGGAAAACCCGCGCCAAAACGGCGCGGGTGAGGGCGATTGTGATTG GAATTGCACTCGCCACGGCGGTGTTGCTGGTGGCGGTGACGGTGCACGTGGTCAGAAAGCGGAGGCTGCACCGAGCGCAG GCCTGGAAGCTCACCGCGTTCCAGAGGCTGGAGATCAAGGCGGAGGATGTAGTCGAGTGTTTAAAGGAAGAGAATATAAT TGGGAAAGGAGGAGCAGGCATCGTGTACAGAGGTTCCATGCCGAACGGAACCGACGTGGCGATCAAGCGGTTGGTAGGGC AGGGAAGTGGGAGGAACGATTACGGTTTCAGGGCGGAGATTGAGACGTTGGGGAAAATCCGGCACCGGAATATAATGAGG CTTCTGGGGTACGTTTCGAACAAGGATACGAACTTGTTGCTGTATGAGTACATGCCGAATGGGAGCTTAGGGGAGTGGCT GCACGGTGCGAAGGGTGGGCACTTGCGGTGGGAGATGAGGTATAAGATTGCGGTGGAGGCGGCGAGGGGACTCTGCTATA TGCACCATGATTGCTCTCCTCTTATTATTCACAGGGATGTTAAGTCCAACAACATTTTGCTTGATGCTGATTTTGAGGCT CATGTTGCTGATTTTGGACTTGCTAAGTTTTTGTATGACCCTGGTGCTTCTCAGTCCATGTCCTCCATTGCTGGCTCCTA CGGTTACATTGCTCCAGGTTCTATTCTCTTCACTCTTCATCGTTTTCTATGTTCTCTCTGTTGACAGAAATTATCATTAG ATTTGTTTCCCATAATCAAACAAAAAAAGTACATCAAAACTACACGTGGGGAAAATAGTAACCAGACAAGTGAATTTAAA ACAGGGAATTTAGTTATTCATTCAAGTGCATATTATTATTTGTTGGAAAATATAAATAATCCTATACACTCCAATAACAC ATTGACAAGTAAGAGGTATGAATTGATATCTAATATCATAAGAAAAGTAGATAAACCTAAAGATAAAATAAGTAAAAATG ACAGGAATTAGATAAAGAGCTTTGAATTCCCTCCAAATTCATGAACTACTCATTTACAAAACCATGGAGTGAAGCATTTT TCAAACAGATTAATATCAGACGACTTATAAATATTGTCTTTGACTTCCTTATAGTTAAGGAAAACTCGCATTGATGTAGT CAAGCATTTTTCAGTCAATTTAGATGATATGGCTCATATTTTGAGTTAATTATTTGAACTTAAAATATGAATTGTCTAAT TAAGATCAAATGACTAATATAATGATTTGGTGAATGCTAGTTTTCACTAACCGTGGGGAATCCAGATTCAAGAGAGATTG AAATTTCTTGCAATTAGGGAAAACTCACATTCACACAATTAAATATTTTCCGAGCGTCCCATTATGGAATAGACACTTAG TTAAAATGTAAATAGTCCACTCAAGGTCAAAATGCTAGTTTTAATTGACTATACTCAATCCAAATTGAAGAGACACTTAG ATTCCCTTCAATTAGGAAAAACTCTCATTCCCTTACTATCCGTTGGACTATGACTTACATTTTGAATTACTTATTAGAAC TTAAAATGTGAATCATCTATTAAGTAGCTAAAAATGCTTGAATGTGTGAATGTTAGTTTTCATCAGTATATCTAAATTGA CAAAAAAGTGAGAGTAGTTGTATAAAAAAAATTACAATATTTGTTGGATGATTTTTATACCTCTTAAACGACCAACTTTG TGCTCCATATTTGAAACAATAATGTTACTTACACACCTCTCATTTGAGGTGGAAGAGGTGGAATGAAGAGAGAGAAAGTA TGAGATGTGATATATGATAAGATGAAAGAAATAAAAACAAAAAGAGGTGGAAATGAAGTGTTTAAAAAATGAGGTGTGTA TATATCATTACTCTATTTGAAATACTCATTTTCCATATTGGTCCTTCGTCCCACCATGGGTCCCAAACCCATTACAGGAA CAATTCTCATCCTTAAAATTTAGTTATGGGGAATATTTGAATTCTAATGATGTAACTCTCACGTGATATAAATGATTAGT GTACCACTAAAATAATATATACCACTTTCGTACACTCATTTTTTTTTTGTGGTGTTCAAAAACACCTTCCCCACCACGTG TGGCTATTTTTCCATTCAGAAATTTTCAACCTGAAATGCCTATTCGTTGAGTTTTAATATTGTTTGGTAAGTGTTGTTTG TTTGGGAAATGCTGTTTGTATGGGATATTTTTAGTGATTTGTTTCTAAAATAGTGCTATTGAATGGTTGGCAGAGTATGC TTACACGCTGAAAGTGGACGAGAAGAGTGACGTGTACAGCTTTGGCGTTGTGCTGTTGGAACTGATCATAGGGAGAAAGC CAGTGGGTGAGTTTGGAGATGGCGTGGACATCGTTGGATGGGTCAACAAAACCATGTCAGAGCTCTCTCAGCCGTCGGAT ACTGCATTAGTGTTAGCAGTGGTGGACCCTCGCCTCAGTGGATACCCCTTGACAAGTGTCATCCACATGTTCAACATAGC TATGATGTGTGTGAAGGAAATGGGCCCTGCTAGGCCCACCATGAGGGAAGTTGTTCATATGCTCACTAATCCTCCTCAGT CTAATACCTCCACTCAAGACCTAATTAATCTCTAGATAATAAACTAAGCTTTTTGTGGATTAGAAGATTCAGTTCTTTGG AAAATAAAATTAACGCATGCAGAAGAAGCTGTGTAAATAACTTCCATATGTACCTAGATTGTGAGAAGTGAAACAACATG CTAAATGCATAGTTGTCCTAAATATTTTCAAGTGTAAAATAGGTATGAATTTTACATTGAAAGGTGTTTCCCAATTGTGT TTCAGGGAATTTTGTACAATGGAATTTTGCACTATTTCCCCATCTCTTAAAAGTTAAAACTGTATTTATCTTCATTTTTC ATTACATTTCATATTTTCTTCTCCCTAACCTAAGTGGAAAGGTGTACAACTCATCATTTTCCCTCTTTGTCCAAAATCCG AAATTTGTGGAATATTATCAGGA 

CDS sequence (LotjaGi3g1v0512000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTGGTGTGTGAATTCTGATACCAAGATAAATACGCCAAATGCAAAATACGAAAACAAGAAGCAAGAAGCAACTGAGGA AGAAGCATTAAACAAAATTGAAATGAGAATCAGAGTGTCTTACTTGTTAGTGCTATGTTTTACCTTAATTTGGTTCAGAT GGACAGTGGTGTACTCTTCATTCAGTGATCTCGATGCACTGCTAAAGCTCAAAGAATCCATGAAGGGAGCCAAAGCCAAA CACCACGCACTCGAAGATTGGAAGTTTTCCACCTCACTCTCAGCACACTGTTCGTTTTCCGGCGTAACGTGCGACCAGAA CTTGCGAGTGGTTGCTCTCAACGTCACGCTGGTTCCGCTTTTCGGCCACCTTCCGCCGGAGATAGGGTTGTTGGAGAAGT TAGAGAATCTCACCATCTCCATGAACAACCTCACTGACCAGCTTCCCTCCGACCTTGCAAGCCTCACCTCCCTCAAGGTC CTCAACATCTCCCACAACCTCTTCTCCGGCCAATTCCCTGGTAACATCACCGTTGGCATGACGGAGCTCGAGGCCCTTGA TGCCTACGACAACAGCTTCTCCGGTCCTCTCCCGGAGGAAATCGTCAAGCTCGAGAAACTCAAGTACCTCCACCTCGCCG GGAACTATTTCTCCGGTACAATACCGGAGAGCTACTCGGAGTTTCAGAGCCTTGAGTTTCTCGGCTTGAACGCAAACAGC TTAACCGGGAGAGTCCCGGAGAGCTTGGCGAAGTTGAAGACGTTGAAGGAACTGCACCTCGGTTACTCGAACGCTTACGA AGGTGGAATCCCGCCGGCGTTCGGTTCCATGGAGAATCTCCGCCTGCTAGAAATGGCTAACTGCAACCTCACCGGCGAGA TTCCACCGAGCCTGGGGAATCTAACCAAACTCCACTCCTTATTCGTGCAGATGAACAACCTCACCGGAACCATTCCGCCG GAGCTATCTTCCATGATGAGCCTCATGTCACTGGACCTCTCCATCAACGACCTCACCGGCGAGATCCCGGAGAGCTTCTC AAAACTGAAGAATCTCACTCTAATGAACTTCTTCCAAAACAAGTTCCGCGGCTCTCTCCCCTCCTTCATCGGCGACCTTC CAAATCTCGAAACGCTTCAGGTTTGGGAGAACAATTTCTCCTTCGTGCTGCCGCACAATCTCGGCGGAAACGGAAGATTC TTATACTTCGACGTCACCAAAAACCACCTCACCGGGTTGATTCCGCCGGATCTATGCAAAAGCGGGAGGTTGAAAACGTT CATCATCACTGATAACTTCTTCCGTGGCCCAATTCCCAAGGGAATCGGCGAGTGTAGGTCACTCACGAAGATTCGCGTGG CTAACAACTTCCTTGACGGTCCAGTTCCACCAGGGGTTTTCCAACTGCCTTCCGTTACGATAACGGAATTGAGCAATAAC CGCCTCAACGGCGAACTGCCTTCCGTGATTTCAGGCGAATCTCTCGGGACGCTCACGCTTTCCAACAACCTCTTCACCGG AAAAATCCCCGCCGCGATGAAAAACCTCAGAGCGTTGCAGAGCTTATCCCTCGACGCCAATGAGTTCATCGGAGAAATTC CGGGGGGAGTTTTTGAAATCCCAATGCTCACCAAAGTCAACATCAGCGGCAACAACCTCACAGGTCCGATCCCAACGACG ATCACTCACCGTGCTTCTCTGACGGCGGTAGACCTCAGCCGGAACAACCTCGCCGGCGAGGTTCCGAAGGGGATGAAGAA TTTGATGGACTTAAGCATTCTGAATCTCTCACGCAACGAGATTTCTGGACCGGTTCCTGATGAGATTCGATTCATGACTA GCCTCACGACGCTGGATCTCTCGAGTAACAATTTCACCGGAACAGTCCCCACCGGCGGCCAGTTTCTGGTATTCAACTAC GACAAGACGTTCGCCGGAAACCCGAACCTCTGTTTCCCTCACAGAGCATCCTGTCCTTCTGTCCTCTACGACTCGTTAAG GAAAACCCGCGCCAAAACGGCGCGGGTGAGGGCGATTGTGATTGGAATTGCACTCGCCACGGCGGTGTTGCTGGTGGCGG TGACGGTGCACGTGGTCAGAAAGCGGAGGCTGCACCGAGCGCAGGCCTGGAAGCTCACCGCGTTCCAGAGGCTGGAGATC AAGGCGGAGGATGTAGTCGAGTGTTTAAAGGAAGAGAATATAATTGGGAAAGGAGGAGCAGGCATCGTGTACAGAGGTTC CATGCCGAACGGAACCGACGTGGCGATCAAGCGGTTGGTAGGGCAGGGAAGTGGGAGGAACGATTACGGTTTCAGGGCGG AGATTGAGACGTTGGGGAAAATCCGGCACCGGAATATAATGAGGCTTCTGGGGTACGTTTCGAACAAGGATACGAACTTG TTGCTGTATGAGTACATGCCGAATGGGAGCTTAGGGGAGTGGCTGCACGGTGCGAAGGGTGGGCACTTGCGGTGGGAGAT GAGGTATAAGATTGCGGTGGAGGCGGCGAGGGGACTCTGCTATATGCACCATGATTGCTCTCCTCTTATTATTCACAGGG ATGTTAAGTCCAACAACATTTTGCTTGATGCTGATTTTGAGGCTCATGTTGCTGATTTTGGACTTGCTAAGTTTTTGTAT GACCCTGGTGCTTCTCAGTCCATGTCCTCCATTGCTGGCTCCTACGGTTACATTGCTCCAGAGTATGCTTACACGCTGAA AGTGGACGAGAAGAGTGACGTGTACAGCTTTGGCGTTGTGCTGTTGGAACTGATCATAGGGAGAAAGCCAGTGGGTGAGT TTGGAGATGGCGTGGACATCGTTGGATGGGTCAACAAAACCATGTCAGAGCTCTCTCAGCCGTCGGATACTGCATTAGTG TTAGCAGTGGTGGACCCTCGCCTCAGTGGATACCCCTTGACAAGTGTCATCCACATGTTCAACATAGCTATGATGTGTGT GAAGGAAATGGGCCCTGCTAGGCCCACCATGAGGGAAGTTGTTCATATGCTCACTAATCCTCCTCAGTCTAATACCTCCA CTCAAGACCTAATTAATCTCTAG 

Protein sequence (LotjaGi3g1v0512000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MWCVNSDTKINTPNAKYENKKQEATEEEALNKIEMRIRVSYLLVLCFTLIWFRWTVVYSSFSDLDALLKLKESMKGAKAK HHALEDWKFSTSLSAHCSFSGVTCDQNLRVVALNVTLVPLFGHLPPEIGLLEKLENLTISMNNLTDQLPSDLASLTSLKV LNISHNLFSGQFPGNITVGMTELEALDAYDNSFSGPLPEEIVKLEKLKYLHLAGNYFSGTIPESYSEFQSLEFLGLNANS LTGRVPESLAKLKTLKELHLGYSNAYEGGIPPAFGSMENLRLLEMANCNLTGEIPPSLGNLTKLHSLFVQMNNLTGTIPP ELSSMMSLMSLDLSINDLTGEIPESFSKLKNLTLMNFFQNKFRGSLPSFIGDLPNLETLQVWENNFSFVLPHNLGGNGRF LYFDVTKNHLTGLIPPDLCKSGRLKTFIITDNFFRGPIPKGIGECRSLTKIRVANNFLDGPVPPGVFQLPSVTITELSNN RLNGELPSVISGESLGTLTLSNNLFTGKIPAAMKNLRALQSLSLDANEFIGEIPGGVFEIPMLTKVNISGNNLTGPIPTT ITHRASLTAVDLSRNNLAGEVPKGMKNLMDLSILNLSRNEISGPVPDEIRFMTSLTTLDLSSNNFTGTVPTGGQFLVFNY DKTFAGNPNLCFPHRASCPSVLYDSLRKTRAKTARVRAIVIGIALATAVLLVAVTVHVVRKRRLHRAQAWKLTAFQRLEI KAEDVVECLKEENIIGKGGAGIVYRGSMPNGTDVAIKRLVGQGSGRNDYGFRAEIETLGKIRHRNIMRLLGYVSNKDTNL LLYEYMPNGSLGEWLHGAKGGHLRWEMRYKIAVEAARGLCYMHHDCSPLIIHRDVKSNNILLDADFEAHVADFGLAKFLY DPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIIGRKPVGEFGDGVDIVGWVNKTMSELSQPSDTALV LAVVDPRLSGYPLTSVIHMFNIAMMCVKEMGPARPTMREVVHMLTNPPQSNTSTQDLINL 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 38 38 -
Phobius 39 61 23 -
TMHMM 39 61 23 -
Gene3D 58 223 166 2.2E-40
Phobius 62 677 616 -
Pfam 62 105 44 8.8E-9
PANTHER 65 1005 941 0.0
PANTHER 65 1005 941 0.0
SUPERFAMILY 113 456 344 9.42E-62
SMART 155 179 25 180.0
Gene3D 224 321 98 1.4E-24
Pfam 279 301 23 0.6
SMART 301 325 25 91.0
Gene3D 323 393 71 5.0E-15
SUPERFAMILY 342 667 326 1.12E-49
SMART 373 397 25 49.0
Gene3D 394 661 268 3.3E-70
SMART 516 540 25 62.0
Pfam 566 625 60 7.5E-8
SMART 612 635 24 66.0
TMHMM 676 698 23 -
Phobius 678 699 22 -
Gene3D 693 805 113 2.2E-23
Phobius 700 1020 321 -
SUPERFAMILY 723 1004 282 2.16E-71
ProSiteProfiles 729 1005 277 35.99
SMART 729 1004 276 6.2E-26
Pfam 730 1004 275 6.7E-41
Gene3D 806 1018 213 1.2E-56
ProSitePatterns 850 862 13 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0512000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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