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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0278300 |
| Transcript ID | LotjaGi6g1v0278300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | QWRF motif protein (DUF566); TAIR: AT2G44190.1 ENDOSPERM DEFECTIVE protein (DUF566); Swiss-Prot: sp|O80588|EDE1_ARATH Protein ENDOSPERM DEFECTIVE 1; TrEMBL-Plants: tr|A0A1J7I5H6|A0A1J7I5H6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0278300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:59509815..59515471) extracted from Lotus japonicus Gifu genome v1.2.
CATAACAATAACAAAAACATTAAAAATCCCGTTTATCGATTTTTGAAATTGGAACCGTTACAACGTAAACCCACTCAACC AAACATAACCCCAACGGCTACATCTCCTTCCAACACAACGCCGAAACCGAACCCTCTGTCACTCCAAATCTTCACTTCCG ATTCACTCACACCACCATTTCCCTCCTCTGAAATCTGGGGCGGTTCCAATTCCTTCATGGCGGCGGCGCCGGTGAAACCT CTTGCTGCAACCGACACCATGCAACTCACGGATTCCGACAACCCCGCTCCACCTCCTCCGCCGCCGGTTCCCCACACCCG CCGGCCGAGGGTCCGGGAAGTCAGCTCCAGATTCATGTCGCCGGCTGCTTCCTCCTCCCAGAGGCGGCAGCATCGGGCAG ATTCAGACCTCTCCGGCGACGAGAATTCTGAATCCTCGTTTCCGATCGCGAATTCTGTTGCTCAGAGGAAGCAGCGTGCC GCCATGAAGCTTTTCAGGGAAAGCAATGGAGTTGTTGATCAGGTGCCAAATCACCCTCCTCACCCTCCTCACCCTTCAAA GTCTTGTTCATCTAGAATTGGAATTGGAATTGGGGGTAGTGGCAATACTAATAACCCTAATTCAATTGCTACACCTTCTA GGCCTGATACCCCAACTCCCTCGGTTTTCGTGCCTTCGAGATTCCGGCTCACGCCTCATCATCACAACAACCACAACCAC AGCCACAGCCACAGCCACCATAGGTCTATCAATGGAAGTGCATCAGTTGCTGCAAAATTGATGCAAGCGAGTGGCATGTC ACAGTCATTGTCCAAGGCCAATGCTGCCGCTGCTGCTTCTGCTTTGTCTCAATTGGAATCCAATTCGCGCGATGATTCTG CGATAAGTTGCAGCACACAGTCACTTCCTGAGTTGTGTTCTGAGAATGATAGAGATAGGTTGACTCTGAACGACGCTGCG AAAATTGGCAATAGTGGGGAATTGAAATCCCATCCTTCACCTTTGTCCCGGTCTGTTACTTTGCCTGCTTCAAGCAGTGA GCACTTGCTGCTGGTAAAGGGGTCTGAGAAGCAACCGGCTTCTGTGTCAAATCATGTGAAGTTAGGAGGGCTTAGTTTGC CGCCGGTTGCTCCTCAGTGTGCGAGACCTGCATTGGACACAAGGAAAGGGAGGAAAGGGTCTAGTCATCAGGAAGATGTG CATTCCCTTAGATTGCTCCATAATCGTTATCTGCAATGGAGATTTGCTAATGCGAAAGCGGCAGCTTCGATGAAAGCTCA GCAAAAAGAAAGCGAGGTACCTTCTAATTCCTACTTATTGGCAAAGTTACAAATATGTAGTAGTAGCACAAGACTACTAC AGAAAATCGCTGTTATCTGGCTAGGCAGTTCTATACTTGTAATTCTCTTTGATACAAGGAATTTAGCAATGTTTGTTTGG TCATGACTCTTGAGCAAGAAGGTGGATCTCTATTCCAGTTACAAAGCAGATGTTGAAACTTGAAATAACATTGATTGTAG CTTGAAAGATATGGTTATTAACTTTTTATTTCCTACACCTTGTATTAGATACAATCATTAAAAGATATGTATTTCTCAGG GATAAAGGAAAGAGGAGAGAAATCTCTGTAAGTCTCCATCAAATTATTTAGATTTTAGTTTTCAGTGTGTAAACTGACTA ACCTCACATCTTCATTTACTGGTTATTTTGAAATTATACTCCGATGAACTTGATGTGGCTTTGTAGATAAGTACAACACT TTCATTCATGTGCAAGTGTTGTTGTGCTTTAGATATTTAGATTTTAGAACTCTCCTGCGCATTTATACTCAGTATTACAG TTGGTTTTGATATAACATCAAAACTTGCTACCCTTTTCAATTTAATCACCCTTAGCTCTTGTTGTCACTCTTTGTTTTTC TTCTTCTTTATCCTTGCAGAAAGCACTATATTCTCATGCAATGAAAATATCAGAAATGCGTGATTCTGTGAACAGGAAAC GCGCAGAACTGGAGCTTTTGCAGAGATATAAGACTCTATCAACAATTCTTGATGCTCAAGTGAGGCCACTGATACTTCTG AATGCTTCTTTTACATTTTTGCATTCTAGTTGTGCCCATTGTAAAGCTTCCTGATTGTGATACTGAAAGTGATTATTGCT TGATGACTTCTTATGGTATCAATATTTAAGTCTATATGTTTTTGATATATCTTGAAGTGGTTTTGATAGAATACCAAATT CTTTTGCTATCAGTTCTCTTTCTTTCTTTCTTTTTGGTAAATGCACTGTAATAGTAATTGTACATTTTATTGGATGCAAT TACAGATGCCATATCTAGAGGAGTGGTCTTCTATGGAAGAAGATTATTCAGTCTCCCTTACTGAAGCAACTCAGGCCTTG GTGAACGCCTCAGTGCAGCTTCCAGTTGGTGGCAATGTTAGGGTATTATTATAAATCCTCTTCTCATGTCTGTTGATTAT GTACAAGACAAGCGTTTATTTTCTTTCTGCTATGTTTATTCATTGAGATTGTTGGCAAGTTCTCCTTCATAAAAATGTAT TATGCAACAGGTTGATGAAAGAGAGGTGGGGGAGGCGCTGAACTCAGCATCAAAGATGATGGAAACAATTGTTTCCAATA TCCAAAGATTAGTGCCAAAGGTGAGAAAAATGAAAGAATGGATCTATTCAATTGTTTGCAATGCACTTATTTTTCCTTCA AACCATCATGCCAAAGGTTGGTTTTGTTCACATTGACATGTAGCCTTCCAGTTGGGGCAATTGATGAGTTTCTTTAAGTG AAGAAACACATCAAGAATTCCTAGATTTTATGCATAAATAGTGAATGGAAAACAGATGTACTATTTGCTATTGGACTCAT AAAAGTTTGTGAAACTCAGGCAGAAGAAACAGATAGTTCTATTTCAGAATTAGCGAGAGTTGTCGGAGGAGAAAGAGCTC TTATTGGAGAGAGCGGCGATTTATTGTCAAAGACATATAAATCACAGGTTTGTCTTGCTCACAGTCCTTTCATCTTCATC TTGTTTATCTCCAGCAGTTCATAATATCTAGAAGGTGCTGTGATTTTTAGGTGGAGGAGTGCAGCTTAAGGGGCCAGCTA ATCCAACTGCATTCAATTTGTCAAAAGAATAAGAATAAAGAACAACAAGAAAGTGATAATTAAATTGCTACTTTGCCAGT CAACTGTGGAAATACCTCCCATCTGATGTTGTTAATAATAGTTTGTTAAGGGAGCATCAAGAGTACAAGGCCTGAGAATT CATTTTAACATTTTTTACATTAGTTGAGAAAGGGGGAGAGGATCATGATTGATCACATGTAAAATTTGTTTGAGTAGCTA TCTCTTGAATTCACTGTAGGCCTGAGTGAATTCACCATGGTCTCTCTCCCTGTTTCACTCACTGGATGTCAATAAAAGTA ATAGGACACTTTGTCCTTGAATGTATGAGAGTTTACTTCAAATAGCACAAATAGCATTGGAACTTTTCTTTTAAATGTAA AATTACATTCATGCTCTGGAATGAAACTTGAAGATTTAAAACAACCGAGGCCAATCTTGTAAAGTACTGTTTTTATATAC ATAAGTATGAAATGAAAATCAAAGTTTTAAAATACAAGGTTGTGTCTGTTTTTCAGTTGGGGTTACTTTTGGAAATCTAA ATCCACATTCCAAGGCAGAAAACTCATATTTTCTTGTAGTGTTGGCGTTGTGTTGAGTCAAATGGAATGGAAAACTTGGT TCTCCAAACAAGATTTGCATTCCAAGAATTATCAGCTTTGGTGCAATATTTGCTGTCATGATCAATCCATCCAACCATTG ACGCTTCCAAACAGAGGTTGAATGTTAAAGTCATGACAATGAAAAACGAATCTGGGAAAAGTTTTACCGTAACCTTTCAG TGGACAACAATGTTCAAAAAGTGAAACTAGGAGACCAAGCTAGAACACAGAAATCTAATCCAACCCTCTGATCCAAAATT GAGCATGTTTATTTCATTAACCATATGTCTCATTTACAAGTACGAGGGCATTAACTACGTAATAAAATTCATATCCCCAA TTGCGGCCGGTCGCATACCCCTAGTAGAGGTGGATCACTCTAATGTAGGAAGACAAGCCCCTAAGGAAGACGAAACATGC CTGATGAAGCTTTTACCTCCAACTCGTATGACTTGGTCTGTCATCCTTCATGTAGGAACATTATCAATAACGATAATGAT TTTACCACTTCCTCTTATCTTCCTCCCCTACATATATTCCTTAACCAACCAACCTCTAACCATGCTCACCTGACCTCTCC CTTTCACAATCTTCATCATTAAAAAAAAAAACACCAAACCTCATCTTTATTCTCTCTTTGTTTCCTGACAATTTAGCAAA CACTCTTATTCCCCACCATGACACTGACAGCATTTGGGTATTTGCCTTGGGCTCACCTCGAGATGCACACAAGAAAACAT TGCATGGTCGCTTTTGATGATCATATCCTAGCTCACTCTAGCTTGCCATGACTTTCTTTTACTAGTTACACCATTGGGGT CCTGCTTGGGGCAAGTACTACTCCTATTACCACTTCTCTATCATATACTTTTTCTTCTGTTGTTTCAGACCCTGGCCACA AGAACATATCAAGAAAACAAACAACAATCTCCGGTCCCAAAAAGTACTTTTTAATTGGAAGCATGAACCTCATGTCCTCC CTGACACACCATCGTATTTTGGTGGCGACAAAAGCATGCAGGGCCATGAGGCTCATGGCATTACGCTTCGGTGTTTGAAC ATGAGGTTGTAGGCGGATTCCTTGATTGGAAATCAGCTCACACATAGCTATGGAGAGTCTCCTTGGCTAAGTTGGAGGTG GCATGTCGAGATGACACGTCTGTCACCGAGGTTGAACACCATGAGCTTTGTGGCCATGCATGCTTTTGACTCGGCCATAA TACAGTGTTGTGCCAAGGAGGACATGAGGTTCATGCTTCCAATTAAAAGGTACCTTTTGGGATCAAAGATTGTTGTTTGT TTTCTTGTTAGGTTTTTGCGGCTGGGGTCCGAAACAACAGAAGAAGTAGATGATGGAGAAGTGGTAATAGGAGTAGTACT TGCCCCAAGCAGGACCCAAATGGTGTAACCAATAAAAGAAAGTCATGGCAAGCCAGAATGAGGTAGGACATATTTTTTTG ATAAGCTTGCGAGGTTGGACATGATCAACAAAAGCGACCATGCAATGTTTTCTTGTGTGCATCTTGAGGCCAAGCACAAG GCAAAGATCGAGAAGTTAACAATGTCATGGTGGGGAATTAGATCGATATCAATCACAAAGTATAAAAACAGAAAAATAAC ACATTTCGAGACATTTTTAACTAATAAAAAAATGTTTCGAGATGCGTTACTTTTCCATTTTCATATTTGCTGACTCGTAT TCAAACTGGTTCTAAGAGTGTTTGCTAAACTGTATGAGAAAACAAAGAGAATAATAAAGAGGAGGAGGCTTTTTGTTTTT GTGGGATGATGGGGAGAGAGAGGTCTGGTGAGTATGGTATAAAGGGTTGGGTGGTTGAGGAGTATATATAGGGGAGGAAG AGAAGAGGAAGGATTGGTTTTGTTTTGGACAAATCACAAATAACAAGAGCTGCGCCG
CDS sequence (LotjaGi6g1v0278300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGCGGCGCCGGTGAAACCTCTTGCTGCAACCGACACCATGCAACTCACGGATTCCGACAACCCCGCTCCACCTCC TCCGCCGCCGGTTCCCCACACCCGCCGGCCGAGGGTCCGGGAAGTCAGCTCCAGATTCATGTCGCCGGCTGCTTCCTCCT CCCAGAGGCGGCAGCATCGGGCAGATTCAGACCTCTCCGGCGACGAGAATTCTGAATCCTCGTTTCCGATCGCGAATTCT GTTGCTCAGAGGAAGCAGCGTGCCGCCATGAAGCTTTTCAGGGAAAGCAATGGAGTTGTTGATCAGGTGCCAAATCACCC TCCTCACCCTCCTCACCCTTCAAAGTCTTGTTCATCTAGAATTGGAATTGGAATTGGGGGTAGTGGCAATACTAATAACC CTAATTCAATTGCTACACCTTCTAGGCCTGATACCCCAACTCCCTCGGTTTTCGTGCCTTCGAGATTCCGGCTCACGCCT CATCATCACAACAACCACAACCACAGCCACAGCCACAGCCACCATAGGTCTATCAATGGAAGTGCATCAGTTGCTGCAAA ATTGATGCAAGCGAGTGGCATGTCACAGTCATTGTCCAAGGCCAATGCTGCCGCTGCTGCTTCTGCTTTGTCTCAATTGG AATCCAATTCGCGCGATGATTCTGCGATAAGTTGCAGCACACAGTCACTTCCTGAGTTGTGTTCTGAGAATGATAGAGAT AGGTTGACTCTGAACGACGCTGCGAAAATTGGCAATAGTGGGGAATTGAAATCCCATCCTTCACCTTTGTCCCGGTCTGT TACTTTGCCTGCTTCAAGCAGTGAGCACTTGCTGCTGGTAAAGGGGTCTGAGAAGCAACCGGCTTCTGTGTCAAATCATG TGAAGTTAGGAGGGCTTAGTTTGCCGCCGGTTGCTCCTCAGTGTGCGAGACCTGCATTGGACACAAGGAAAGGGAGGAAA GGGTCTAGTCATCAGGAAGATGTGCATTCCCTTAGATTGCTCCATAATCGTTATCTGCAATGGAGATTTGCTAATGCGAA AGCGGCAGCTTCGATGAAAGCTCAGCAAAAAGAAAGCGAGAAAGCACTATATTCTCATGCAATGAAAATATCAGAAATGC GTGATTCTGTGAACAGGAAACGCGCAGAACTGGAGCTTTTGCAGAGATATAAGACTCTATCAACAATTCTTGATGCTCAA ATGCCATATCTAGAGGAGTGGTCTTCTATGGAAGAAGATTATTCAGTCTCCCTTACTGAAGCAACTCAGGCCTTGGTGAA CGCCTCAGTGCAGCTTCCAGTTGGTGGCAATGTTAGGGTTGATGAAAGAGAGGTGGGGGAGGCGCTGAACTCAGCATCAA AGATGATGGAAACAATTGTTTCCAATATCCAAAGATTAGTGCCAAAGGCAGAAGAAACAGATAGTTCTATTTCAGAATTA GCGAGAGTTGTCGGAGGAGAAAGAGCTCTTATTGGAGAGAGCGGCGATTTATTGTCAAAGACATATAAATCACAGGTGGA GGAGTGCAGCTTAAGGGGCCAGCTAATCCAACTGCATTCAATTTGTCAAAAGAATAAGAATAAAGAACAACAAGAAAGTG ATAATTAA
Protein sequence (LotjaGi6g1v0278300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAAPVKPLAATDTMQLTDSDNPAPPPPPPVPHTRRPRVREVSSRFMSPAASSSQRRQHRADSDLSGDENSESSFPIANS VAQRKQRAAMKLFRESNGVVDQVPNHPPHPPHPSKSCSSRIGIGIGGSGNTNNPNSIATPSRPDTPTPSVFVPSRFRLTP HHHNNHNHSHSHSHHRSINGSASVAAKLMQASGMSQSLSKANAAAAASALSQLESNSRDDSAISCSTQSLPELCSENDRD RLTLNDAAKIGNSGELKSHPSPLSRSVTLPASSSEHLLLVKGSEKQPASVSNHVKLGGLSLPPVAPQCARPALDTRKGRK GSSHQEDVHSLRLLHNRYLQWRFANAKAAASMKAQQKESEKALYSHAMKISEMRDSVNRKRAELELLQRYKTLSTILDAQ MPYLEEWSSMEEDYSVSLTEATQALVNASVQLPVGGNVRVDEREVGEALNSASKMMETIVSNIQRLVPKAEETDSSISEL ARVVGGERALIGESGDLLSKTYKSQVEECSLRGQLIQLHSICQKNKNKEQQESDN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 88 | 88 | - | – | |
| PANTHER | 26 | 522 | 497 | 2.1E-154 | – | |
| PANTHER | 26 | 522 | 497 | 2.1E-154 | – | |
| MobiDBLite | 101 | 147 | 47 | - | – | |
| MobiDBLite | 121 | 145 | 25 | - | – | |
| Pfam | 179 | 491 | 313 | 2.9E-62 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0278300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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