Standard codon usage table

Column layout per nucleotide are represented as: Triplet, Amino acid, Total observations, and Frequency (observations per 1000bp). The colour scheme for amino acids are based on their properties:

  • Non-polar
  • Polar
  • Basic
  • Acidic
1st base2nd base3rd base
UCAG
UUUUPhe36136724.63UCUSer35453924.17UAUTyr24709716.84UGUCys15534610.59U
 UUC 26795018.26UCC 19109913.03UAC 15909510.84UGC 1242088.47C
 UUALeu18582012.67UCA 31464321.45UAAStop (Ochre)  UGAStop (Opal)  A
 UUG 35969124.52UCG 746565.09UAGStop (Amber)  UGGTrp19008912.96G
CCUU 35823324.42CCUPro28125019.17CAUHis23361615.92CGUArg938306.4U
 CUC 20929814.27CCC 1132127.72CAC 1413119.63CGC 762005.19C
 CUA 1400809.55CCA 25504617.38CAAGln30294020.65CGA 754065.14A
 CUG 18935712.91CCG 760155.18CAG 24339916.59CGG 643134.38G
AAUUIle37616725.64ACUThr25633617.47AAUAsn40607227.68AGUSer22303015.2U
 AUC 20134513.72ACC 16722511.4AAC 25895217.65AGC 16422811.19C
 AUA 19929813.58ACA 23995316.36AAALys42645129.07AGAArg24239416.52A
 AUGMet37105425.29ACG 592014.04AAG 46689631.83AGG 20705214.11G
GGUUVal39556126.96GCUAla39770327.11GAUAsp54213436.95GGUGly29897520.38U
 GUC 14859410.13GCC 16608411.32GAC 22696515.47GGC 15485610.56C
 GUA 1402219.56GCA 30679520.91GAAGlu50244634.25GGA 29773620.29A
 GUG 27708018.89GCG 858565.85GAG 43424329.6GGG 19059612.99G

Inversed codon usage table

Column layout per nucleotide are represented as: Triplet, Amino acid, Total observations, and Frequency (observations per 1000bp). The colour scheme for amino acids are based on their properties:

  • Non-polar
  • Polar
  • Basic
  • Acidic
Amino acidTripletObservationsFrequency (observations per 1000bp)
GlyGGG19059612.99
 GGA29773620.29
 GGT29897520.38
 GGC15485610.56
GluGAG43424329.6
 GAA50244634.25
AspGAT54213436.95
 GAC22696515.47
ValGTG27708018.89
 GTA1402219.56
 GTT39556126.96
 GTC14859410.13
AlaGCG858565.85
 GCA30679520.91
 GCT39770327.11
 GCC16608411.32
ArgAGG20705214.11
 AGA24239416.52
SerAGT22303015.2
 AGC16422811.19
LysAAG46689631.83
 AAA42645129.07
AsnAAT40607227.68
 AAC25895217.65
MetATG37105425.29
IleATA19929813.58
 ATT37616725.64
 ATC20134513.72
ThrACG592014.04
 ACA23995316.36
 ACT25633617.47
 ACC16722511.4
TrpTGG19008912.96
STOPTGA00
CysTGT15534610.59
 TGC1242088.47
STOPTAG00
STOPTAA00
TyrTAT24709716.84
 TAC15909510.84
LeuTTG35969124.52
 TTA18582012.67
PheTTT36136724.63
 TTC26795018.26
SerTCG746565.09
 TCA31464321.45
 TCT35453924.17
 TCC19109913.03
ArgCGG643134.38
 CGA754065.14
 CGT938306.4
 CGC762005.19
GlnCAG24339916.59
 CAA30294020.65
HisCAT23361615.92
 CAC1413119.63
LeuCTG18935712.91
 CTA1400809.55
 CTT35823324.42
 CTC20929814.27
ProCCG760155.18
 CCA25504617.38
 CCT28125019.17
 CCC1132127.72