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Field | Value |
---|---|
Gene ID | Lj1g3v4012760 |
Transcript ID | Lj1g3v4012760.1 |
Related isoforms 1 | |
Lotus japonicus genome version | MG20 v3.0 |
Description | PREDICTED: frataxin, mitochondrial-like [Glycine max] gi|356571796|ref|XP_003554058.1| |
Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 77 | 172 | 96 | 9.40E-50 | ||
SUPERFAMILY | 77 | 171 | 95 | 2.96E-32 | ||
Gene3D | 82 | 171 | 90 | 2.00E-36 | ||
ProSiteProfiles | 86 | 172 | 87 | 26.308 | ||
Pfam | 86 | 171 | 86 | 4.60E-31 | ||
PRINTS | 86 | 104 | 19 | 3.90E-11 | ||
SMART | 86 | 172 | 87 | 3.10E-31 | ||
TIGRFAM | 88 | 171 | 84 | 4.40E-20 | ||
TIGRFAM | 90 | 171 | 82 | 2.20E-31 | ||
PRINTS | 124 | 139 | 16 | 3.90E-11 | ||
ProSitePatterns | 138 | 152 | 15 | – | ||
PRINTS | 139 | 154 | 16 | 3.90E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Ferroxidase activity | Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O. | ||
Cellular component | Mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. | ||
Molecular function | Ferric iron binding | Interacting selectively and non-covalently with ferric iron, Fe(III). | ||
Biological process | Iron-sulfur cluster assembly | The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster. | ||
Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj1g3v4012760.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4012760.1, powered by CORGI.
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