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Lj5g3v2241020.2

Overview

Field Value
Gene ID Lj5g3v2241020
Transcript ID Lj5g3v2241020.2
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3-like isoform X1 [Cicer arietinum] gi|502121033|ref|XP_004497165.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23084
442 571 130 1.00E-45 –
SUPERFAMILY
SSF82185
445 571 127 1.11E-28 –
SMART
SM00698
446 467 22 7.4
IPR003409
Gene3D
G3DSA:2.20.110.10
450 572 123 1.60E-25 –
Pfam
PF02493
453 469 17 2.6
IPR003409
SMART
SM00698
469 490 22 0.0044
IPR003409
Pfam
PF02493
471 493 23 4.90E-05
IPR003409
SMART
SM00698
492 513 22 1.5
IPR003409
Pfam
PF02493
494 515 22 3.00E-04
IPR003409
Pfam
PF02493
521 538 18 19
IPR003409
SMART
SM00698
538 559 22 0.97
IPR003409
Pfam
PF02493
540 552 13 1.2
IPR003409

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 35

Expression data

Expression pattern

Expression pattern of Lj5g3v2241020.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v2241020.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.