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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0116600 |
| Transcript ID | LotjaGi1g1v0116600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acyl-CoA N-acyltransferase (NAT) superfamily protein, putative; TAIR: AT2G30090.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|O64815|HLS1L_ARATH Probable N-acetyltransferase HLS1-like; TrEMBL-Plants: tr|A0A151RYB8|A0A151RYB8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0116600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:18349579..18350832) extracted from Lotus japonicus Gifu genome v1.2.
TTTAGCTTTGGAATCAATTGTAGAAAGATTTATATACAAGCACTTAGTATATATTAGGATGCAAACTAAGGAGCACATAT TCGAGCTTATATAATGCAATATTTAGTACATAAATTCCAATAAACTGTATCCAGATGAGCTTTTAATCTTCCTTGTCTTG GGCTTGTTCTTTGATTGTCTTATATACCCGTTATTGGTCAATTTGGTTTTAGGTAGCAGAGGATCAGGACAATGAATTGG TTGGTGTCATTCAAGGCTCAATAAAAGTGCTCACAATTCATGGTCATGCTCCACATGATTTGGCCAAGGTAGGCTATGTC CTAGGCCTAAGGGTTGCACCCCATTCTCAGAGAAAGGGAATTGGCTCCAACCTAGTGCAAAGGCTAGAAGAATGGTTCAT TTCCAATGATGTAGACTATACATATGTGGCCACAGAGAAAGATGACCATGCCTCAGTGAGTTTCTTCATGGGAAAGTTTG GCTACACTAAGTTCAGGACTCTGGCTGTGCTAGTAAACCCAGTGAATCATCACTCAGTTCAAATCTCACCCAACATTGAG ATAGCTAGGCTCAAGATTGAAAAGGCTGAATCCCTCTATAGAAGATTCATGGGCTCCACTGAGTTCTTCCCTATTGACAT AGAAAATATACTAAGGAACAAGCTAAGCTTGGGGACATGGGTGGCTTATTTTAAAGAAGATAGTGGCTGGTGTGAGTCAG ATGGAAAAGTGCCTCATAGTTGGGCTATGCTTAGTGTGTGGAACAGTGGTGAAATCTACAACCTAAGGATAGGGAAAGCA CCTTTGTCTTGCTTGTTATTCATAAAGAGTTGGAACTTGATTGGTAAAATCTTACCATGCTTGAAATTTCCAACCTTGCC TGATTTCTTCAATCCATTTGGGTTCTACTTCATATATGGGGTGTACCATGAAGGGCCACTCTCAGGGAAGCTGGTGAGGG ACTTGTGCCAATTTGTGCACAACATGGCTTCTATATCCAAGTGTGAGAATGAGAACTCCAAGATCATTGTGACAGAAGTT GGAGAAGGAGATGAGCTAAACCATCATATTCCTCATCAGAAATCTCTCCCATGCCCGGACTTGTGGTGCATAAAGACCTT GAAAAATGAAGAGACACACACGTTTTGTGAATTAACCAATACTCCACCAAGAGCTCTCTTTGTAGACCCGACAGAGGTCT AAAGAATTGAAATCTTATGTCCCTAAACTATGTCTCATTCTCTGTTCTACAAAT
CDS sequence (LotjaGi1g1v0116600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAAGTTTGGCTACACTAAGTTCAGGACTCTGGCTGTGCTAGTAAACCCAGTGAATCATCACTCAGTTCAAATCTC ACCCAACATTGAGATAGCTAGGCTCAAGATTGAAAAGGCTGAATCCCTCTATAGAAGATTCATGGGCTCCACTGAGTTCT TCCCTATTGACATAGAAAATATACTAAGGAACAAGCTAAGCTTGGGGACATGGGTGGCTTATTTTAAAGAAGATAGTGGC TGGTGTGAGTCAGATGGAAAAGTGCCTCATAGTTGGGCTATGCTTAGTGTGTGGAACAGTGGTGAAATCTACAACCTAAG GATAGGGAAAGCACCTTTGTCTTGCTTGTTATTCATAAAGAGTTGGAACTTGATTGGTAAAATCTTACCATGCTTGAAAT TTCCAACCTTGCCTGATTTCTTCAATCCATTTGGGTTCTACTTCATATATGGGGTGTACCATGAAGGGCCACTCTCAGGG AAGCTGGTGAGGGACTTGTGCCAATTTGTGCACAACATGGCTTCTATATCCAAGTGTGAGAATGAGAACTCCAAGATCAT TGTGACAGAAGTTGGAGAAGGAGATGAGCTAAACCATCATATTCCTCATCAGAAATCTCTCCCATGCCCGGACTTGTGGT GCATAAAGACCTTGAAAAATGAAGAGACACACACGTTTTGTGAATTAACCAATACTCCACCAAGAGCTCTCTTTGTAGAC CCGACAGAGGTCTAA
Protein sequence (LotjaGi1g1v0116600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKFGYTKFRTLAVLVNPVNHHSVQISPNIEIARLKIEKAESLYRRFMGSTEFFPIDIENILRNKLSLGTWVAYFKEDSG WCESDGKVPHSWAMLSVWNSGEIYNLRIGKAPLSCLLFIKSWNLIGKILPCLKFPTLPDFFNPFGFYFIYGVYHEGPLSG KLVRDLCQFVHNMASISKCENENSKIIVTEVGEGDELNHHIPHQKSLPCPDLWCIKTLKNEETHTFCELTNTPPRALFVD PTEV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 244 | 243 | 1.0E-109 | – | |
| PANTHER | 2 | 244 | 243 | 1.0E-109 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0116600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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