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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0137800 |
| Transcript ID | LotjaGi1g1v0137800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carbonic anhydrase; TAIR: AT1G58180.1 beta carbonic anhydrase 6; Swiss-Prot: sp|Q9C6F5|BCA6_ARATH Beta carbonic anhydrase 6, mitochondrial; TrEMBL-Plants: tr|K7LQP9|K7LQP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0137800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:22496746..22500573) extracted from Lotus japonicus Gifu genome v1.2.
GTCTAGAATGAGTTCAATTCTACGATCAAATGCACCTTTAGTGGGTTCATCCTCTACAATTTTTACTTCCACGAGAACTC CCTGGTCAAAATTTGTGAGCTTTTGCACTCTTGTTAAGCTTCTAATCATGTGGTTTTCTGCTTTCCCTTTTCGTATGCTG TTAAAAGATGTTGATAATCAAACATTGGTTTCTTCATTTTTTTTTTTAGCTTTGATTGTTGATGTTTGTTTCAGTGTTTG GTTCTGATGTTGTTTTCTTTGCTTTCCTCTCGCGTTCTTGGTTTTTTAGATAAAAACGGACAGTTGCCATGAAGCAGCAG CAGTATCATTGCCTTCATTGGAGTAAGTTAGAGTTTGTGATACTAGCTAACAAGTTTATACAATTATACTTGAATTATGT TGAAACTCTTGGGTTTCACTTTGTGGGCTTCTAACTTCTTGCAAAAAGGCTAGTTCAGTTGTTATTTTCCTGCTGTTTTT ACTCAGCTGCAATGAATTTTATGGTTAGAAAAGTTATCTTCTGCTTGTTTGGTTTGAAATTGTGCTTCTTTTTGGGCTCT TCACTTGGAATACTGAATTCTTTGCTTGAAAGAAAATGTGACAAATATAATATCAACCATTTATGTGTTCCTTTTAGCAT AGTTGGCTCATGACATGGTATCGTGGATTCTATGACCAAGTACTGTGTAGCAGTAGCTTGATCCTTGTTGCCCAATTATT TTCAGAAAAAGTTTAATTTAAGCACAGTATAGGTAAATCTGTGCATTGTCCATGCAAGAGTCAATTGGATATCTGACTAA GCATACACTAAGGCCGATGGACTTTTACATGAAGGGACGTGTTAGAAATATATTAAAACTGGTCACCGACATCTTAAGCT TTTTTAGGTAGTTGGTTACATTAACAACCCTATAAATTCTGAGCAAATGAAATAATTAAAATAACCCTATAGATTGAATA CTTTATTTGAAGTAAAGAACTCTTTTTGATCTTCACTAGAAAAGCTTCGCACATTTGTGTGCTAGATCATGCATAGCAAT TATTTTCATGGTAATTCAGATTGCTGGCATACTATAAGCAACTTCCACAGAATAGCTTATTCTTTTAAATCCATAAAATG GTGAACTTATTTACATGGAATACTATAACAATGAGTCTATATTTTCTTACAATACTGACAGTCGAAGTATTGTTGTCTGC ACTTCTCTTTAAGCAGTATATGTCAAATTATAAATTTAGCTGAATGATATGAGTGAAAAGTGAAAGTTGATTACAATTAT ATCATTTTTCATAGGGAGAACCAACCAGAGGTTCCAACTAATTGTCTCAGGCTTGATCGAGAAAACAAAGGTCTTGACAT AGGGAATATGACTGAAATTGATGGCCACCAGAATTTATTTAGCTTGATGAAACAGAGGTTTCTAAGTTTCAAGAACCAAA AATATATGTAAGAGCTGTGTTGCACATTTTTCGCAGTTTCAGCTTGCAAAAATCAGTTACTTGTTTTTAGTCTAGTATCT TAATAAGCTATTTTTCTTTTAGACAGAAAAGAGTTGGAGCGTTTTCAAGCTCTTGCTAAAGTTCAATATCCAAAGGTGAT AACAAATTGATTTATGTTGTCCAGTCAATTATTTGTTACAGAACTGTTCCCTCTTTTTCATTATATTTTAGCTTAATTTC TTTCGTTCCTGTATTCTTTACTGCTCCATGTTGGTCTTGACTCTTAACTGATAAGTCCAAGTACAGTTTTTCGTAATTGC TTGTGCAGACTCTAGGGTATGCCCCTCTAACATATTAGGATTCCAACCTGGAGAAGTATTCATGATTCGTAACATCGCCA ATCTTGTACCTGTCATGAAGGTATTTGCATGATTCCTTCAAATTATTTTTCCCTCTATAAACAGGACATTCAAACTATTT TTAATTGTTATTTCTCTCTCATAATTGTTCTCTTCTGTTGGAGAATAGAATGGACCAACAGAGTGTAATGCTGCTCTTGA GTTTGCAGTAACTACTCTTGAGGTAGGTACTTATTTATAAAGCTGTTATCATACTTAGATTGATAGTGTGTTAGGATCAG CTTCTCTTTCCTCGGAATCAATTCTGTCACACAGAAGATACTCACATAAGTTTCTCTCTAGAATTGGTTATGATTATAGA ATCAATTGTGGCAGAACTTCCAAACATGGGCTGTGCAGAACTAAATTCAAAAAGACATTGGTTTCTTAGTAAGTTCCCAA GTAAAAGCATTAGCCAAAAATTTCAGAAAATGCAAATGAATGTCTAGCAAGAGAATTTTATTGAGGATATGATATTGCAT ATCCCTTTGTTGTAAGAGAAATGGATGGGAAAAACCAGGAAAATAGAGAAGTGTCAAGTAACCACTTATCCCAAAAGCTT TATCTGACATGGTATCAGAGCCTCTATGACCGAAAGGTCTAGAGTTCGATCCTTGCTTCCCTCACTTTCTAATTAAAAAG TGGAATTTAATTAAGCACATGGTAGGTGGGTCTGTGCATTTATCCACGCTTCAAGCCTAAAGGGCTCTTGCGTGAGGGGG CGTGTTAGAATATAATATAAAACCATTAAAGTGACCCTTACCCAACAGCTTAAGCTTTTGGGATTAAGTGGTTACTTAAC AAGAAGTTGCTACTTGCTAGTTGCTAGAGACTATTGCAATTATTATCTGTTTTCTCTGCACTTGTTTGTAAGCCAACTAC ATCAATCATATTTAAAATGGTTTTTGAATTTTTCAGGTTGAGAACATATTAGTCATTGGTCATAGTAGCTGTGCTGGAAT TGAAAATCTGATGAGGATGCAAGAAGATGTAGAATCAAGGTATTTAACTACTACAGCTAAAATATTTTATGTCACAATTA AAATGCCTCTAGTTCTCATTTTTCATCCTTCAGAAACTTCATATTCAAGTGGCTTGCCAATGGAAAGGTTGCCAAATTGA AGACAAATGCTGCCACAGCTCATCTTACCTTTGATCAGCAGTGCAGATTCTGTGAGAAGGTATTCGTCATATTTCATTAT TCCTTACCAAATTATGTGAAGTTGCCACTTGGAACTCTTACATGTTACAAACACCAGTGTGCATGTTTGGTTTTCTGTTG GAGATTCTCAAAAGTATAGTTTTGGCTTATGTTTTTGGACGATATCAATGCAAATCCAAACATCCTACCTAGCGTTTTTG GATACATTTCTCTCATCAGAATCAATTTTGGAACCCAGATGTTACTCATAGAAGCTTGGCTTCAGAATCAATTATTTAAG GGTTTCCAAATGTGCACTAAGAACTTAACCAATCAAATGTTACTAAACTAGTTCTGTGCCACTTACAAGTTAATGGTAGT AAATCTTATCAATTTGGAATGCTGTTAAGTGTTGTTCATTTGATTTGTTGCAGGAATCTATTAACCAATCATTATTGAAC TTGCTAAGTTATCCTTGGATACAAGATAGAGTGAGTAAAAAGCTGCTTTCTCTTCATGGAGGGTATTATGATTTCTCCAA TTGCTCGTTTGAAAAATGGACCCTTGATTTTGAAGAATGCAATGTTAGAGAAGAAGGGCCAGAATATGCTGTCAAAGAAC AAGAATTCTGGTGCTGACCCATAGGCCTGAAACCTTCCATTAATTGGGCTAAGGTTAATTGAGGGTGTATAAGTGTATAA CACAATAAACTCGCCCTGTAAATGAATTAAAGGAATGATTTATGATTCTCATGATTGTGATATATAATTTGGAAACATGG CTTATTTAAAATGTTTTTTTTAAATGACTTATTTAAAATGTTGTTGTGCATTAAATTGGATAAAATGT
CDS sequence (LotjaGi1g1v0137800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTCAATTCTACGATCAAATGCACCTTTAGTGGGTTCATCCTCTACAATTTTTACTTCCACGAGAACTCCCTGGTC AAAATTTATAAAAACGGACAGTTGCCATGAAGCAGCAGCAGTATCATTGCCTTCATTGGAGGAGAACCAACCAGAGGTTC CAACTAATTGTCTCAGGCTTGATCGAGAAAACAAAGGTCTTGACATAGGGAATATGACTGAAATTGATGGCCACCAGAAT TTATTTAGCTTGATGAAACAGAGGTTTCTAAGTTTCAAGAACCAAAAATATATAAAAGAGTTGGAGCGTTTTCAAGCTCT TGCTAAAGTTCAATATCCAAAGGTGATAACAAATTGA
Protein sequence (LotjaGi1g1v0137800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSILRSNAPLVGSSSTIFTSTRTPWSKFIKTDSCHEAAAVSLPSLEENQPEVPTNCLRLDRENKGLDIGNMTEIDGHQN LFSLMKQRFLSFKNQKYIKELERFQALAKVQYPKVITN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 116 | 115 | 2.1E-20 | – | |
| PANTHER | 2 | 116 | 115 | 2.1E-20 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0137800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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