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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0151000 |
Transcript ID | LotjaGi1g1v0151000.8 |
Related isoforms 8 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Hexosyltransferase; TAIR: AT1G77810.1 Galactosyltransferase family protein; Swiss-Prot: sp|Q6NQB7|B3GT7_ARATH Beta-1,3-galactosyltransferase 7; TrEMBL-Plants: tr|A0A0B2PF29|A0A0B2PF29_GLYSO Hexosyltransferase; Found in the gene: LotjaGi1g1v0151000 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:25957886..25961940) extracted from Lotus japonicus Gifu genome v1.2.
GGGGTGGTATTTCTAATGGGTGGGGTGTCAAATCCTCCTCTCATGATTTACTCATCTTGAATTCCTAATTCCATTTCTAC ATGTGTTTTTGAATTGTGTTTGTGTGAGTTTTGGAATATAATAGAAGCAGTTTGTGCAGGACAAGGATGTAATGGATGAA GTGTACAAAACCCATGAAGCTATTAAGTGAGTGATAAAGATTAAAGGGTTTATGTTTCAATTTTGGCTAGATTTGCTTGC TATTTAAGTTTCTATTGAATAATTGGTGATTTTGTTTCCTTTTGAGGCATGTCAGATCTCTAGACAAGCAAGTTTCAATG CTTCAGATGGAGCTGGCAGCATCCAGGAGTGCGCGAAAACTAGGGATCTCAGATAATTCTTCGGCTATGTCTAATAACAC TCTGGGCTCGGGGCTCTCCAATGAAGGATCTTCCAGGAAGAAAGTGTTTATAGTGATTGGCATAAACACAGCTTTCAGTA GCAGGAAGCGTCGTGATTCGGTCAGAGATACGTGGATGCTTCAAGGTATCTGATATTGCTAATCAAAACTTTTGTAATCT AATCTAAATGGTGATGGATTATTTCTAACTAGTTTGTTTCTGGCTCCCCTTTTTCATCAGGTGAACAACTTCTTCAATTG GAACGCGAGAAGGGAATTGTTATTAGATTCATGATTGGTCACAGGTAATGTCATGTATGTTCCTGACCATATTGATGACA TGAAATTAATGTCAAAACAAAATATAGTGCAAATCAGGAGAGAATTACAATTTTACAATTATACCTTGAGAGACTATGGT CAGTGAATGAATATATGATTATGCACACAATTTGTAGCTATACAAAGTTTTTCGTTAAGTGAAAAACATGTTTTTATATT ATATTAATATGGTAAGAAAAAAGATTATTTTATATTTTGTATAATAAACTTATCACTGTTACACTTAAATCTTGCTGCTA GATCCACAAAATTGTCACAAAACTGGCCATAAAGAATTTTGAATCCCTTCTTCTAGGAACCGTTACTGGACGTGAAACTT GCATTGGATAACTCCTACTATTTACAGCAGGATCCCTCTGCAGTCCTTTGTTTTTTCTATTTAAGTCAGTCCTTTCATGC TGAGATTGAAGATGCTGTACTTGTTTCCAGTTATTCAAATGATCAAACTAATCAAAGATTGTTGACAGTATATCTCTATG AATATGTCACTGTCAACAATCATTTGAAAATCTATGAAGTTTGAAAGCATATTGCTATTGCTTACTTTCTCTTAATATTA ATTCTTATTAAGGAACATGATTTCAAAATCTTGTGTTAAGCGGAAATCTTTTTAAAAATGTAAGCTAGAATTGAGTCCTT ATATCAGTACAATTTAAAATATGTAAGCTAGAATTGAGTCCCTAATCTCTATGAGTTCACCCTGCTGACTTTAGAGCATG TGGAAATGCTTTTTTTTTTTGTTTAAAATAGGTTCAAGGCATGATGGTCTTATTCTCGGTCTTTGTACAATAATACATTC TCTAAGTAACCAAAATCCATATCTCCATTTGTACTCATCATCTTAGTAACTTGGGTCTGTATCACATGCTTCATCAATTT TATACTTGGAATGTAATATCAAGAGTTTGGGGTCAGAAATCATAGAAGTTAAAACATCATCATGACATAACACATGATTA TTGTCTGTCTGTGCTATTGTTGGGTTTTTGAGATATCAATTGTGAAGAGGTACATAAGGAGACAAATTTGTTCAGTCTAG AGAGCTCTAAAGGCATAATAGTAGTATTTGAAAATAGATAGTTCTGAAGTTACCATAGGCATGCTTCCGTTCGGTTACTT TAATGAATTCTTAAGAACACAATATAAAATGGTCTTATTATTACTCTATCTGAAAATGGATATATGCTTACATGGGTTGC ATATTTATACTTAATGGAACTGATATGAATGAAATTGTCATGGTCTTCCCAGTGCGACTTCCAATAGCATTCTAGATCGA GCTATTGATTCAGAAGAAGCCCAGCACAATGACTTCCTTCGCCTGGTAACACGCATCATTAGAGTTGGTTACACAAGAAA AATCTTGAGAGTCTAGCTGGTTGACAGTGTAGTTTATTTATCATTTTTCAGGAACATGTTGAAGGGTATCATGAACTGTC TGCAAAGACAAAAACTTTCTTTTCCACTGCAGTTGCAAAGTGGGATGCTGATTTCTATGTGAAAGTGGATGATGATGTCC ATGTTAATTTAGGTATGTGCTGTCTCAGGATTCTTGACATCTTTCTTGTGTTTCAAAGCCATTGTTTCATTCACTGCTTT CATCCATCCTGTTTCCCATCATAATCAAGGTTTATTCTAACAACTTAGGTGTACTGGCAACAACCCTTGCTCGTCATCGT TCAAAATCCAGGGTCTACATCGGATGTATGAAGTCTGGACCTGTTCTTTCTCGAAAGTAATTCCACTGGACTTATATATT AGAAAAAAGGCTATTCCCCTTCTATGCTCCTCCTTGTGTCTTTGAAGTTGTCTGATTTCTTTTCTGTATATGTAGGGATG TTAAGTACCACGAACCCGAGTTCTGGAAGTTTGGAGAGGAAGGGAATAAATACTTCAGACACGCAACTGGGCAGATATAT GCAATCTCTAAGGATCTGGCCACTTACATTTCCATCAACCAGTAAGGATATTGCCTTTCATGCAGTACTTAATTAACTCT TCTGATCTCTGGCCAACAAAGTGTGTGGGTCTGAAAAACATTTTTGAATGTGAAATTAATCATGGAACCAGAATTTCTTA GTGCAGAATGATGGGGCTGTCATTTATTTAAAGAGAAAATACTATTTTCTTAAATTAAAATCAAAAACATTTTTTCAAAG TAAGTTAAAGCGTTTACACATACATAGCTTATGGATCAGTCAAAATCTTTCTTGCAAGCAAATTTCACGGAATTCTTAAT TCCGACTGCAGGCCGATATTGCACAAATATGCTAATGAAGACGTCTCACTTGGTTCATGGTTCATTGGTCTGGAAGTTGA GCATATTGATGATCGCAGTATGTGCTGTGGGACTCCTCCAGGTATGGCATCTGAAAATAAATAACAAGAAAACATTTTCT ACCTATCTCTTTGAGAGACAGACTATCACAAATAGAGTATGTGTCTTTGATTCAAGTACCACTACAAGATATGGTGTTTG TCATGTGGTCTTTGGATCACTTCCCAACAAACTTTTCTTGAATGGCTCTCCACATTTCTTCATGTTTTCCTTGATAAAAA TTTGTTGGAAGCAGGATTCAATCAGAAAGCTCAGTGAAATTTGCATACACTTAGCATTCATTCACAATTTTGATTTATAT ATTCAACTACCTGCTTGATGACTGTTTTGTAAAACAGTTTTCCAGTTTTTGAAAACAGAGAAAGAAATAAGTTTGTTTGA TGTAAATGTTTTTTTATGGGTTCAACCGTTCAAGTCTTGGAAACAACCTCTTGTGTAAAAGATAAGGTGAGGCTGCGTAC AATAGACCAAATGGTCGGACCCAACACATACAGGAGCTTTGTGCACCGAGCTGCCCTTTTTTCTATATAATCAGTTTATA AAAACAGTTATTAAAAAAAAATTATCTTCAGTTTTTAAAACTAAAATCTCAAAACATTTAAGATATGTTTTCTATTTTTA TTTTTAGTTTTAAAGTCACAGGTCTTTCAACTCTGCAAAACATCTAGTTCAAAATGTTTTTTTTTTCTTCTTTTGAAAAA CATGTTTTAAAAGTTGTTTCTGAAAGCAATTTTTAAATTCAGAAAACAAAGAAGGGAATCAAACAACTCCAAGTCTCTCA ACTCCCTCACCATTTTTTTCCTTTTCTCTTTGGATTTGGTTCTCATTTGGAGTTATGCTTGTGTAGACTGTGAGTGGAAG GCACAAGCGGGTAACATATGTGTTGCATCCTTTGACTGGAGCTGCAGTGGAATCTGCAAGTCAGTGGAGAAGATTAAATT TGTTCACTCAAAGTGTGGTGAAGGGGATGGAGCTGTTTGGAGTGCTTTAGTTTAG
CDS sequence (LotjaGi1g1v0151000.8) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGAAGTGTACAAAACCCATGAAGCTATTAAGCATGTCAGATCTCTAGACAAGCAAGTTTCAATGCTTCAGATGGA GCTGGCAGCATCCAGGAGTGCGCGAAAACTAGGGATCTCAGATAATTCTTCGGCTATGTCTAATAACACTCTGGGCTCGG GGCTCTCCAATGAAGGATCTTCCAGGAAGAAAGTGTTTATAGTGATTGGCATAAACACAGCTTTCAGTAGCAGGAAGCGT CGTGATTCGGTCAGAGATACGTGGATGCTTCAAGGTGAACAACTTCTTCAATTGGAACGCGAGAAGGGAATTGTTATTAG ATTCATGATTGGTCACAGTGCGACTTCCAATAGCATTCTAGATCGAGCTATTGATTCAGAAGAAGCCCAGCACAATGACT TCCTTCGCCTGGAACATGTTGAAGGGTATCATGAACTGTCTGCAAAGACAAAAACTTTCTTTTCCACTGCAGTTGCAAAG TGGGATGCTGATTTCTATGTGAAAGTGGATGATGATGTCCATGTTAATTTAGGTGTACTGGCAACAACCCTTGCTCGTCA TCGTTCAAAATCCAGGGTCTACATCGGATGTATGAAGTCTGGACCTGTTCTTTCTCGAAAGGATGTTAAGTACCACGAAC CCGAGTTCTGGAAGTTTGGAGAGGAAGGGAATAAATACTTCAGACACGCAACTGGGCAGATATATGCAATCTCTAAGGAT CTGGCCACTTACATTTCCATCAACCAGCCGATATTGCACAAATATGCTAATGAAGACGTCTCACTTGGTTCATGGTTCAT TGGTCTGGAAGTTGAGCATATTGATGATCGCAGTATGTGCTGTGGGACTCCTCCAGACTGTGAGTGGAAGGCACAAGCGG GTAACATATGTGTTGCATCCTTTGACTGGAGCTGCAGTGGAATCTGCAAGTCAGTGGAGAAGATTAAATTTGTTCACTCA AAGTGTGGTGAAGGGGATGGAGCTGTTTGGAGTGCTTTAGTTTAG
Protein sequence (LotjaGi1g1v0151000.8) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDEVYKTHEAIKHVRSLDKQVSMLQMELAASRSARKLGISDNSSAMSNNTLGSGLSNEGSSRKKVFIVIGINTAFSSRKR RDSVRDTWMLQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEEAQHNDFLRLEHVEGYHELSAKTKTFFSTAVAK WDADFYVKVDDDVHVNLGVLATTLARHRSKSRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKD LATYISINQPILHKYANEDVSLGSWFIGLEVEHIDDRSMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKFVHS KCGEGDGAVWSALV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 325 | 325 | 6.6E-177 | – | |
PANTHER | 1 | 325 | 325 | 6.6E-177 | ||
Pfam | 1 | 33 | 33 | 6.2E-8 | ||
Gene3D | 56 | 266 | 211 | 3.8E-8 | – | |
Pfam | 79 | 276 | 198 | 3.1E-48 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. | ||
Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi1g1v0151000.8, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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