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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0368200 |
| Transcript ID | LotjaGi1g1v0368200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytokinin riboside 5'-monophosphate phosphoribohydrolase; TAIR: AT5G11950.1 Putative lysine decarboxylase family protein; Swiss-Prot: sp|Q84MC2|LOG8_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8; TrEMBL-Plants: tr|A0A0S3RBJ3|A0A0S3RBJ3_PHAAN Cytokinin riboside 5'-monophosphate phosphoribohydrolase; Found in the gene: LotjaGi1g1v0368200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:84641466..84643254) extracted from Lotus japonicus Gifu genome v1.2.
ATGATGGATGGCCACCCCAGAAGCAAGTTCAAGAGGCTCTGTGTCTTCTGTGGAAGCAACTCTGGCAACCGAGATGTCTT CAGTGATGCTGCTATTCAATTGGGCAATGAACTGGTTAGTGTAAAAATGGTTTTTTTATGGTTTCAGAGCATGCCCTCTT GTTGCTTTACACTCGTTTGATATAAGTTCTGTGTAGCAGGTTGTTTTCCAATACTGCATTTCATTTTGAATCTGTTTGGT TTCTTAAAGTTTGGTTTTTTATTGATACACAGTGAAAAAAAACTGAAGGGTACATCAACATCTTTATGTGTTTTACATTT TTATCTTATGGCATGAATTACAGGTTAAGAGGAATATAGACTTGGTGTATGGTGGGGGAAGTGTTGGTCTTATGGGCTTA ATATCCCAAAGAGTGTATGATGGAGGCTGCCATGTCCTAGGGTATGTATATCAGCCTATGCCATAAAAATCCTTCCTTTT TAGTGTTACTGATAATTGATGACATTGTCTCACCATTTGTTTTTTTCATCTTCACAATTTTTCTTTCTTTTATGTACAGG ATCATTCCAAAAGCTCTCATGCCTCTGGAGGTATTTGTGCTACTATTACTATCTGTTGTCCTATAAAAATCTGTGTCACT TTGTTTGTTTTTCTCTCCATATACAATTAATTTGGTTGGATTTCAGTTGGTCACATTTCCCTCTTTCCAATGCAAAAAAA GCCAATGGAACGAAATGGATGAAATGAGGGAATGTGCTTTTACTTTTTTGCAACTTTTAAGCAAACACACACTTGATCAT TGGCAATGGACTGATTAATATTTTCTATTAGTTTATTCTTGGGATTTGTATTGTGATGATTTGATTACCAAAATTAAGAA GGAGGGAGTAGGTTTTCTTCTTGTATACCAAGTTTTACTTTCATTATCTTCAATCTGCTTCCACCAATGCATTGGCATTT CACTTCTTACTTCATAGCAGGACTGATTTGTGGTGAGAGTTGATGGATCCTTATGATAATTATTCCAATGAATTAGCATG TGTTGTTGGTTAATTTTGACAGATATCTGGTGAAACAGTTGGTGAGGTGAGAATCGTTTCAGATATGCATGAGCGTAAAG CTGCAATGGCTCAAGAAGCTGATGCCTTTGTTGCTCTCCCTGGTATATACCTGAAGAACTTTCAAACAATTTTAAATAAT AATTGATGATTACATGTCTTATACATGTAAATATGCCATTAGCATTGTTCTTAGATATGCTAAAGTTTGATTTTACTTTT GATGTTAAGGATTGCTATACTGATCCTGTAATTATGAGTTTCTCTGTTCTTATACATTCCCTTTTTCCTTACAATTAGGA GGATATGGAACCATGGAAGAGCTATTGGAGATGATAACTTGGGCGCAACTTGGAATTCATAAGAAACCGGTAACATAGTC ATTTTACTGCATAGTACAGAATCTTTGGTATAATAATCCAATGTTAACTCAATATCTTCCTGCACAGGTTGGTCTATTGA ATGTTGATGGTTACTATAACTCTTTACTTGCATTGTTTGACAATGGTGTTCAAGAAGGATTCATTAAGCCTGGTGCACGG AATATAGTTGTATCTGCTCCTTCTGCCAAAGAACTTATGATGAAGATGGAGGTGTGTTTTCATATTTGTGATTTTTTTTT TCAAAGATTAATGGTAGATTGGTTTACTAGGATTACTAGGAAAAATAAATTGAACTTCTATGTTTATTGGTGTATCATTA TTGGATGTACTAATGATGTATACAGTTAA
CDS sequence (LotjaGi1g1v0368200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGGATGGCCACCCCAGAAGCAAGTTCAAGAGGCTCTGTGTCTTCTGTGGAAGCAACTCTGGCAACCGAGATGTCTT CAGTGATGCTGCTATTCAATTGGGCAATGAACTGGTTAAGAGGAATATAGACTTGGTGTATGGTGGGGGAAGTGTTGGTC TTATGGGCTTAATATCCCAAAGAGTGTATGATGGAGGCTGCCATGTCCTAGGGATCATTCCAAAAGCTCTCATGCCTCTG GAGATATCTGGTGAAACAGTTGGTGAGGTGAGAATCGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCAAGAAGC TGATGCCTTTGTTGCTCTCCCTGGAGGATATGGAACCATGGAAGAGCTATTGGAGATGATAACTTGGGCGCAACTTGGAA TTCATAAGAAACCGGTTGGTCTATTGAATGTTGATGGTTACTATAACTCTTTACTTGCATTGTTTGACAATGGTGTTCAA GAAGGATTCATTAAGCCTGGTGCACGGAATATAGTTGTATCTGCTCCTTCTGCCAAAGAACTTATGATGAAGATGGAGAG TTAA
Protein sequence (LotjaGi1g1v0368200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMDGHPRSKFKRLCVFCGSNSGNRDVFSDAAIQLGNELVKRNIDLVYGGGSVGLMGLISQRVYDGGCHVLGIIPKALMPL EISGETVGEVRIVSDMHERKAAMAQEADAFVALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNSLLALFDNGVQ EGFIKPGARNIVVSAPSAKELMMKMES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 3 | 187 | 185 | 1.1E-83 | – | |
| PANTHER | 5 | 186 | 182 | 1.6E-115 | – | |
| PANTHER | 5 | 186 | 182 | 1.6E-115 | – | |
| SUPERFAMILY | 8 | 185 | 178 | 5.34E-59 | – | |
| TIGRFAM | 12 | 186 | 175 | 2.6E-56 | ||
| Pfam | 55 | 185 | 131 | 2.6E-44 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0368200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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