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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0396400 |
| Transcript ID | LotjaGi1g1v0396400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RNA-binding protein; TAIR: AT1G17370.1 oligouridylate binding protein 1B; Swiss-Prot: sp|Q9M427|UBP1_NICPL Oligouridylate-binding protein 1; TrEMBL-Plants: tr|A0A151R3U3|A0A151R3U3_CAJCA Nucleolysin TIAR; Found in the gene: LotjaGi1g1v0396400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:88238656..88248889) extracted from Lotus japonicus Gifu genome v1.2.
AACCCGATGAGAACACCCACGGGTTGAATTACACTCGTCTGGAAGTGGATGGATATCGATTGAGATTGCCTTTCGAGTAG TGAGAGACAGACAAGAGAGAGAAGCCAATTTGGGACCAGCCACCACACCCTCTTCACCTTTCTCTTCTCTCAGACTCAGA TTAATCAATCACGGTGAGTGAGTATTTCCCCTCCAGATTTCAATTTCAATCTCTGATTCACGATCATCATCTTCATCAAT TTATCATTATTATCATGATTTCTTTCAATTTCGAAATTGTAATCTGTGCGCGGTTGATTTTTGTGTTTTTGTGAATCAGG AATCTGAATCGCGGGATTAGGATTCGTGTGTGACCGAGCGGAACATGCAACAGAGGCTGAAGTTGCAGCAACAACAACAA CAAGCCCTCATGCAGCAAGCTTTGCTTCAGCAGCAGCAGATGTACCACCCTGGCATGCTCGCCGCTGCCATGTCTCAGGT CAACCTTTCAGAATCATCACTTTTTTCTCGCGTTCTTCTATTTCCTGTAAACTAAGAAATTAGGGCACACGAATGTACGG ACAATTTTTAACAATTCATGTAACTAGTTTGCACTGATCTATTCTATTGTATTGTTGTCATTGCAACTATTTTGATTCTG ATGATGCCTGCTTTTACTCGTTTATGATTGTTGTTGTTGTTGTTGCAGTTATCTCTTCTAATGGTTAATTTGATATAATT GTTGCTTGTATTGTTGAATGGCGTGTTATTTGTAGTATTTGTTTTGGATTAAGTAGGGATGCGTTTTGGCGGCCTTGATT GAAAGAGCAAGAAAGTAAATTTTGAACAAACTTTACATTCTCTCTCGAAAGTCAAAGTACATTTATTTCTCATTGTAGAG GAGACGAATTCATTTGTTGGATTTGCAATTATTTTTATCCAATTTTTTAGGTATTTGATGTATCAATGGATAGCAGTTTT TTCGAAACTTCTTTAAGCAGTTTGAGTTTATTAAAATATGTCAAGAATGTTTCACCTATAGACACAAAAAGCAACAAATA TTTGTTTGATATGAGATAGTATTGTTTTACTCAATTGATTGATTTACCCTTTTAGTCGATATTTTGGTTTGTTAACTAAG AGTCATATAAGAAACAGTTCATTCCGTTACTAATAATAATAGAGTTTAAATTCTTTTCTCCTCTATGAGTTTGTTTAAGC CTTATTAGAGTATATGTTAGTGTATGTAATCTAGGCTAGGTCTAACTCAGCCTGAAAAGCTAGCTCATGAGATGAGCATT GCGGAAGCCTTTATAAGCTCTACTTTGGTCATATCTCTAATTGAGTAGGATTTCAACACACCCCCTCACGCCTAGGACTA GACATATGGAGCGTGAAGATATGAAAAAGCCACACGGCCAGGTAGATTGTACCAGGAAATCCACGGGGCCATGTTGGCTT TTGGAAAGACGTGGCTAGCCTAATAATTAATATCGATCTAGGATAGGTTTGGATACCTTATATGAATTTGGGATTGGCTG AACTGAAGCCTTAAAGCTGGCTTTCAAGGTAGGATTGGCAAAGTCTTTATAAGAACTGTTATCTCCATATCTCTAATCAA TGTTGGATCTCAAGTCTCAACATATGTCATGAACCAACTATCACAAAGGCTTAAGCTATTGGGTGAAGACACATGAATGA TTTCATGTTATATTTCCAACACGCCCCCTCACGCAATAGTCCATTGAGCTTAAAGAGTGGACAATGCATAAGTCCACCTA ACATGTGCTCAAATTCAGCTTTTTATTAGAATAGTGAGAGAAATGAGGATTGAACTCCAGACCACTTGGTCATAGAGGCT TTGATGTTCTGTCATGAAGATATGAACCAATAGAATTTGTAAAACTAATGGCTGCAATAAGGGAAGCCTAGAGTGGCCGC AATAAGGTGGAAATTCAGGGGTGGTTGCTATGAAGGTGGAATTTTGGGTCTAATATAACTTATATTGGGGGAAGACACAT GAATGATTTTAGTCAAACAGTTGGTAGCTTGTCAGGAACAGCTCATAAGCTCAGTTAGTGTCTCTAACAGAATCTGGGTG ACAGAATATGTTAGTTATTACTTGTTAGTCTTAGTCAGTTATCATACGAAGGTTCTAGACTCTGTTAGAAGTGCAAACAC TAAATATATTTTAGTGTAGCTAAATTCAGATAATGCAATCATTCTCAGATTCTTCAGAGCTAACTTTATTGACCATTCTC TTTCTCTCACTCTCTCTCTCTCTCTTCTACTTTTCATTTTCGTCATATTTCTGATAAGGCAGCTTCCTAAAGGTTTTTCT TTCTTGAACCTTACTTTATTTACTCCGTTATGTTTATTCTTTTTCATTCTGGAAATTTGCAGATGGAGCCCGTTCCAAGT GGAAATCTGCCTCCTGGTTTTGATGCTTCTTCTTGCCGTAGTGTGTGAGTGTTAGATTTCTTTATGCTTTTAGATGTTTT CTGTCCGTAGTTTCATTTTTGTGCCCAGGTATGGCAGTTTTCTATTAGATACCTAAAATCAGACTGTAAATGCAAATTTC TTTACACAATGGTATTCATAACTGATCTGAATGTCTGAGATAAATTTGATACCAATCATGTTCAATATGATATTAAATAA TCCCTACCTGAAGAAGTCTAGTTTTTCACCTTGACAGCTAACTAATCAGAAAATGCATGCTTTCAGTTATGTAGGAAATA TTCATGTAAATGTTACCGATAAGCTTCTCGCAGAAGTTTTTCAGAGTGCTGGCCCTCTTGCTGGGTGCAAGCTCATAAGA AAAGAAAAGGTTTGTTTTGATATTCAACTCAATTTTCTTTGTTAGTGATCACTATTAACATTTTAGTACTTTTTCCCACA ATTTCCCTCTTTTAACTAGCCTTGTTTCAATAAAGTGATAAATAAAACAATTTTGCTATTTTTCCTAAAAAATGAATATG TTGGTTATTTGTACTGATGAGTAAGTTTTTTTTTCTTATTTTAATTTCTGCTTTGCATAAGGGTTTAGACTGCACTCAGA ATTATTTTTTAGGGAACTCTTGGGATATTTATTCTATGAAGGTAATAGGTTTTCATTCATGGAGTTCTTAAATGATATGT TTCATATTAAGAAAAAGAATGTATATCAGTACAAAAATAGTTTGGTGAAGCTGGCCTTCACTAACAGAGAATTAGTTTTT CCATTGCCTTCCTTCTTTAGAAATTAGAATCCTCTCTTGCTGTGATGAATGATGGGGTTGTAGGACTAGTGCCTTCTCCT TTTAACGTAATTTATTATTTAATCTTTATGACAAGTTGTCTATACCGACCTTGACAATGTAAGATGGGCTTCTCTAGTTA GGAGTTTTGCATGCTTAAAGGTTAAAATTGAGAGCTTGAGAGTGAGAAGCATCAATTTCGTTACATCTTGCTTTTGTGTT ATGTCAATTGGCAGTATAATCAGTCCTGCTATGTGGTTCATAGTATAATTCCCCCAACAGTAACTCTTGGTTTAGTATCT GTACTTGACTATATATTATATGGTTTTCCTTGCCCTTATCCCTACTATCTTTGCTCTACCTTTTGGTCTCGGCTGACTTG TTTGCCTTTTTTATTGTGAAATTACTCTTACAGTCCTCTTATGGTTTTGTGGACTACCATGATCGAGCATCTGCAGCCCT TGCCATAATGACATTGCATGGACGACAACTGTAAGCATTATCTTTAATAGATTTTTATTCTGGTTCTGTGGCATCTTTGC GTAGAATATTAACTGTAAGGCATTCTGCATCTGGATTTTCTGGAATGACTACAGTCTACAGATAACAGATGTTGTTTTAA TTATGCAATATTACAATTTCCTTGGAGTTTTTCTCTACTGTTGGCAACTTCACATTAGTTTATTTTCTTTTTATTTCCTT TTGCAGATATGGGCAAGCACTTAAGGTCAATTGGGCATATGCCAATAGCAGTAGGGAGGATACCTCAGGTTACTTTTAAG CACATGCTGTTTATTGTTGATTTTGACTATTTTGCTTCTTGGGGGCATCTTTTTTGTTTTTTTTTTTCATTTGTATATTT TTTTAATTTTAGTTTAAAATCATCAGGTCACTTCAATGTATTTGTTGGTGATTTGAGTCCAGAGGTTACTGATGCAACTT TATTTGCTTGCTTCTCAGTCTATCCTAGTTGTTCGTGAGTTCCTCATTGCTTTGTTTTTTTTTTCTTTGTTGCATTTTTT TGTAGTGCAAGGTACTTCTTTTTGCTAGCAACTGTTTTAGTCATTGTTAGTGGTGAGAAGTTGAAGAAAGATAGTTGATA TGGGGGAATTTACTTTTCGACGAGTTACCGAATCCTGCAAGATATTTTTGTTTGCAAAACTTACTTTTCCATCTTCTCTC TTATTATTGACAGTGATGCAAGGGTTATGTGGGATCACAAAACTGGTCGCTCAAAAGGATATGGTTTTGTTTCTTTTCGT GATCATCAGGTATTTCTCATTCCATATACTGGAATATACTGGAAACTAGGTGTTAGTGGGCTAGCTAGTGATGATGCCCA AATAGGCTGAAGACTCTGGTTCTGTACAGTTAGAATTTTGTTACAGACTGCTTAATGTGGTTAATTAGGGAGCTCTTAGA AGGTGCTAAAGGGGCTATAGGCTATATTAGGCAGTGTGTTACTTGTTGAGGAGAGATCCAGAACCTCAAATTATGGGAGT TTGTATCCATATGAGTCTGCACCTACTTTTATACAGCACTGAATAATCCTTTCCTTAAGTCTGATTTCTTTCTCATTTTT GGTGCCAGTTGTATCACCATGTTTGTTGATTATGTGTTGAATTAGTAAAATGATATGTCTTTGTGCAATCAATATGCAGG ATGCTCAAAGTTCCATAAATGATATGACGGGTTAGGCATTTTATTATCTCCCATGCTGTTTGTTCCCGGCTTCTGTTGTC ATTTGCTTTGTTCCTACCAACTTTTGGTATTTTCTGTATTTAATAGGTAAATGGCTGGGAAATAGGCAAATACGATGCAA CTGGGCAACTAAGGGTGCTGGTGGAAGCTCTAGTGAAGAGAAGAACAGTGACAATCAAAATGCTGTCGTGCTTACTAATG GATCTTCAGGTATCCTATTCCTTTCTAAGAAGATATGCGCCTGAGCCCATATTTGTAAAACCATGAAAATAAAGATGAAG TTTATAGTTTAAATTTGTATACTTCTCAAGATTTGGGCTATATTAGGACCACTCCTATAAAGAATAAAAATAGCGTGTGT ATTTGGGCAGCCCATATTTGTTAGACAAAAGACAAAAGCCTCACCTTCTAGTAAATGCCTCTGGATTTCTACTTGCTTGA TGTGTATGAAGTCAGTTTTGATGTGTGCTTTGTTAGTATATTGGGCTTTTGGTATTATGTATTGTTATCATAATGTGTTC AAAAGGGAAAGAGTAGAGAAGAAAGGCCTGGATTGATACAAATAGCAAAGCTAACTTAGTTTGAGTTAGACTTCACAAAT GCAATATGTTTTACTACTTCTGTGGCACAGTGTTTCTGTTGCTAAGTTTATGGAGTAACTAATGATTACGGTGACTGGAA TTAGTTCAGAATTGGGACCTCCTTTAGCCCCATGCCTTGAGTGCTTCCCCGTTTCCTATGCATTTTTGTAGACAAGTTCG GAACTTTAGGATTGCTGACGGATAGTTATAATTCCCTTTTTCTTTGTGTGTTCTACAGATGGAGGTCAGGATAATAACAA TGAGGAGGCTCCTGAAAACAATCCTTCATATACCACAGTTTATGTCGGCAACCTTCCCCATGATGTAAGTTAAATGAATT GAAAGAATGAAATATTACAGTGTGAATCTTTTAATTTCTTCTTTATTCACAAAGATGAAAATATATTTATGTATTAACTG GAATGGGATTGGTTTGTTAATATTGGCTCTAAGCATAATTTTGGAGGAATTATTAAGGGCATGCATATATTTCAAATTTT CAATGACACACACACTCACACACATATATATATCTGAATTACCTTTGTATTTCTAGTTTTGCTTTACCACTGTCAGCTCA ACATTATGATGAACTCACAGAACTGCTACTGATTTATTGAAGAAAACAGAGACTCAATCCTCAAGAACTGAGGTTGAATT CTCAGGAATTACACAGAAGAATCAAGAACACTAACAAGAACCCTAACCACTGGAATTCGAGATCCAGAATCTCCCAAACA ACTACCCAATCAATAACTGCTCTAACAGAATGAGCAGTTCCCTATTTATACAAATCATAGAACTAACTATAACAGAATAA CATGACATCAGCAATTACAACTGTCAACAGCTTGTATTTAAAAGTAACTAACATAGTTCATTTCTCTTATTCTATTTATG ACTTAGAAATAGCCTTCTAAGTCTTACTCTTCTTATTCCTCCTAACATAGAACTTAGTAACCAAGGGCTTCTTATGCTGT GAACCTTCATCACATTAATAAAACCAAAGTGCCTGAAAAATTGCATAGCAAATGGAAGATAGTTTTCGGCTGCAATCTTT GCAGCTGTAGGAGTGCCTAATTACATGTGGTTAGGGACACATTGCATGCCTAGGCTTGCCAAGGATTATAAGTGTCTTGA ATTTAAATTAGTGTATTCAAATTTCAAGCGTGATTTGTGCTTGGTGCTGACTTGACTGATAGTTTGACTAGGCTCAAGTC TCAACTAGGAGTTTTTTGTTTGGGGTCTGGTTTATTTTGTTTTCCTTGTAAAAACCATTTTTGGCATTTTAATACTTGTT TCTTGCATTTACTTATTGATGAATGTATGTTAAATCTGCTACTGTATGGAATTGTATTTCTCTGATTGATTGTCATAATA GTCTCGCAAATGATCACAAATCATGAATTGCTTATTACAAAACTTCTTGATGTTTAACCTGTCCTGTCTCTAAATTTTTG GTTTGTGGTCACAGGTAACGCAAGCTGAACTCCATTGTCAGTTCCATGCACTGGGGGCTGGGGTGATTGAGGAGGTCCGA ATTCAGCGGGATAAGGGTTTTGGATTTGTCAGATACAACACTCATGAGGAAGCAGCATTGGCCATTCAGGTGGCTAATGG CAGAATAGTTCGTGGGAAGACTATGAAGGTGAGAAGTTTTTCACTTGTTGCTTATCTGGTCGACTAATTAATTGACATTT CAGTATTGGGGTTGATGTTTATCCTTTTTGCAGAGTAGATGTAAGTCTTGCTTTTTTTTTTCTTGCTAATAGCTGTTACT CATACAGACACAAACATGCTTGTATCTATCCATGCCTCCTACTATGTCACTTCTGATACAATTAGATATTAGGCCAACTA ATGGCTTAACTGTTGGATTGAACATTTGAGGGAGGATCTTAACAGATCATTGTATTAGTCAGGATGTTAGTGAATGAGCT GAATCAGTTAGAAGGTTGCTGTCAATTAGTGGGTTTGTGTCAGCTGTCAATTAGTTAGGGGAAGTTATAACAGCTGGACA GTTACCTTTCTTATAAAAGGAAAGGATAGTTACAAGAGGGATTCATTCTGGAAATTGGGATCAGTTTAGGGGAGAGTTGA GCCTATCAAAAGTCTCTACTACCTTGTATCTCTTAGCTCTATTTTCCTAAGTCCTACGTTGGGCAGGTTAGGGATCTTCA TCAACAATACATTCAGTTTTCTTGTTGTTAATTGCTGGTACCTATCAAATTCCACTGAAAAGAAGTAATGTGAACGACCT CTGTGAACAACCTCTGATAGGTGTGATGGAGGTCGTCTTTGGGTGATATATTGATGGGAAATTATAAAATATGGATGCGA TAAGAGCATCATTTTACAAATTAAATGCTAAATCTTTCTACCTTGCCTATTTTTAAAGGCTTGTAGTATGTTTTCATGTG ACTAAAATCTAGTTCACTTAATTTGTGCAGTGTTCATGGGGTAGCAGACCAACTCCTCCGGGAACTGCTTCAAACCCACT ACCTCCTCCTGCTGCTCAACCATATCAAATACTTCCCACTGCAGGGATGAACCAGGGCTATTCTCCTGCCGAGTTGTTGG CCTATCAGCGCCAATTGGCCCTGAGTCAGGCTGCTGTATCTGGCCTTTCAGGTCAAGCTCTTCTGCAAATGACCGGCCAA CACGGCCTAGCCCCCGCTTCAATGGGCATCAACACCGGGGCATCTCAAGCCATGTATGATGGATATGCTGGTAATTCATC AAGACAGCAGCTTATGTACTATCGTTGAGGTATTGATGCGGATCACATTTATCTTTGCTTCCACACAATAGCTTGTCCTT TTCAAACTGGGTTTTTTTATTGAGGTATTGTGGCTTGATGATTATGTACTTAATATTTATGTCGTGTTGTAATTTGTATT GTTTGATCTACTCCGAGGGTTTGATGACTCCAAAAAAGGTATCTATGTTTTTCTAGAAAGGGCAGAGAGAGTTTCATGTT TAAGTAGTTTTTATTATTGTTTTTGTATATTTATTGAATATTAAGACAAGTTCATGTTGATAATTTTATGCTTCTTGTTT TCCTTTTAATCTGTGAAAGGCGTAATATTTGCTTCTTCGTGAATCAAATACTGATGCGCTAGTACGCTATACGCTATATC TGCAGTGATAAATTTCTGGAGAGTTTGTTCAGCGATAATAAAATAGTAAACATTTAATATAAAATGCTAGAGTTTCTTTC CTGAGGACTGAGGAGTACGTTTTTCTTTATTTCTCAACCAAGATTCTGAAATGGTGCAGTTAGTTAGTACTCGGTGCTCT TCAAAACTGCACCCTTTTAGATTTGCTGTTATTTTCACTTAGAATTCTAGATATGTTTGTGTCAAGTTTTGTTTAGTTAA ATATCAATAGAACAAAAAACATGCCTTCACGTTTTGATTGAAAAATGTGTTTTGGCTCAGAAAGTTACAAAATAGAAAAC TAACTGCTTTTCAAAGACTCTAAAATCCCTTTTCAAAATAGAAAACCTCACATGATAACAAATTAAGGGATCCATTTCAG TTTTTTTTTTGGAAGGCTAAGGGATCCATTTCAGTGATAATTTAAATCAGGGACCAGTACCAAATAAGTGAATATTATTA AAATAAAAATAATAATGAAATGAGTTGGAAATTATAAAGATATGTGTTACAATATGATTGAAACACTTCATCAAGGTTAT TCAATCCAATTTTTGTCAATGCTTATTAAGACAACCCTTAAATAAAATATAACACACTAAATTCAAATCAGCATTCTAAA CACAAATTCTAACAGATTTCAAGCATAACATTACATGTGATATAGATATAGAATGGTGAGAGCCATTAATTATGGCTTGA TTAAAAAATGACAAACAGAAACAGAAAGTAGAAAAACAAATTGAACAGTAACTCCCAATCACCACACACATAGAAATAGT CAAGCTACTAGCCACCACTTGAACCAGCTCCAGCACCAAATCAGGCGCCTCCACTTATACCAACACTTGCTCCCACTCCA CCCCCTCCTCATACTCCAATACTAATGCTTCCCACCTGTACTTGTGCGAGCTCCTCCTCCTCCAGCCCCTCCTCCACCAC TACCACCGGCACCACCACTGAGGCTACCTCTAGCACGTCCACCAATGCGACCTCCACCTCCAACAACGCTACCAACAGCA TTAGTGCCACCTCTAACAGCGCTACCAGCAGCATTACCTACACCTTGAACAGTGCTACCAGCAACATTACCTACACCTTT AACAGCGCCACCAACAACATTACCTACACCTTTAACAGCGCCACCACCAGCATTACCTACACCTTGAACAGTGCTACCAG CTACATTACCTACACCTTTAACAACGCCACCAACAACATTACCTACACCTTTAACAGCGTTACCAAGAGTGTTACCAATG CGCCTTTGCCCTTCTACTGATAACACAGTAGCAAGTAGAATAATGCACAAGGTGGCAAACACAACCTGGACATTGCCATT ACTTGTAACAACTTTCATATTGTACTACGTACGAGGGAGAAAGAAACAATTATTAGTGCTGAATTATAAGCTCGTAACTA TTTAAGAGTACTGCATCAACTAATGAGAAACATAGGAGAGTGGTGAGGTTATATATATCGAAAACACGCACGCGCATTAG CTGTCTAATTGTCCAACTGTCCTCTACCTCCAACACGCTATATGAAGAAGCTAGTCACTATTTTCAGTTGGGAT
CDS sequence (LotjaGi1g1v0396400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAACAGAGGCTGAAGTTGCAGCAACAACAACAACAAGCCCTCATGCAGCAAGCTTTGCTTCAGCAGCAGCAGATGTA CCACCCTGGCATGCTCGCCGCTGCCATGTCTCAGATGGAGCCCGTTCCAAGTGGAAATCTGCCTCCTGGTTTTGATGCTT CTTCTTGCCGTAGTGTTTATGTAGGAAATATTCATGTAAATGTTACCGATAAGCTTCTCGCAGAAGTTTTTCAGAGTGCT GGCCCTCTTGCTGGGTGCAAGCTCATAAGAAAAGAAAAGTCCTCTTATGGTTTTGTGGACTACCATGATCGAGCATCTGC AGCCCTTGCCATAATGACATTGCATGGACGACAACTATATGGGCAAGCACTTAAGGTCAATTGGGCATATGCCAATAGCA GTAGGGAGGATACCTCAGGTCACTTCAATGTATTTGTTGGTGATTTGAGTCCAGAGGTTACTGATGCAACTTTATTTGCT TGCTTCTCAGTCTATCCTAGTTGTTCTGATGCAAGGGTTATGTGGGATCACAAAACTGGTCGCTCAAAAGGATATGGTTT TGTTTCTTTTCGTGATCATCAGGATGCTCAAAGTTCCATAAATGATATGACGGGTAAATGGCTGGGAAATAGGCAAATAC GATGCAACTGGGCAACTAAGGGTGCTGGTGGAAGCTCTAGTGAAGAGAAGAACAGTGACAATCAAAATGCTGTCGTGCTT ACTAATGGATCTTCAGATGGAGGTCAGGATAATAACAATGAGGAGGCTCCTGAAAACAATCCTTCATATACCACAGTTTA TGTCGGCAACCTTCCCCATGATGTAACGCAAGCTGAACTCCATTGTCAGTTCCATGCACTGGGGGCTGGGGTGATTGAGG AGGTCCGAATTCAGCGGGATAAGGGTTTTGGATTTGTCAGATACAACACTCATGAGGAAGCAGCATTGGCCATTCAGGTG GCTAATGGCAGAATAGTTCGTGGGAAGACTATGAAGTGTTCATGGGGTAGCAGACCAACTCCTCCGGGAACTGCTTCAAA CCCACTACCTCCTCCTGCTGCTCAACCATATCAAATACTTCCCACTGCAGGGATGAACCAGGGCTATTCTCCTGCCGAGT TGTTGGCCTATCAGCGCCAATTGGCCCTGAGTCAGGCTGCTGTATCTGGCCTTTCAGGTCAAGCTCTTCTGCAAATGACC GGCCAACACGGCCTAGCCCCCGCTTCAATGGGCATCAACACCGGGGCATCTCAAGCCATGTATGATGGATATGCTGGTAA TTCATCAAGACAGCAGCTTATGTACTATCGTTGA
Protein sequence (LotjaGi1g1v0396400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQQRLKLQQQQQQALMQQALLQQQQMYHPGMLAAAMSQMEPVPSGNLPPGFDASSCRSVYVGNIHVNVTDKLLAEVFQSA GPLAGCKLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANSSREDTSGHFNVFVGDLSPEVTDATLFA CFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSSINDMTGKWLGNRQIRCNWATKGAGGSSSEEKNSDNQNAVVL TNGSSDGGQDNNNEEAPENNPSYTTVYVGNLPHDVTQAELHCQFHALGAGVIEEVRIQRDKGFGFVRYNTHEEAALAIQV ANGRIVRGKTMKCSWGSRPTPPGTASNPLPPPAAQPYQILPTAGMNQGYSPAELLAYQRQLALSQAAVSGLSGQALLQMT GQHGLAPASMGINTGASQAMYDGYAGNSSRQQLMYYR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 377 | 377 | 6.7E-199 | – | |
| PANTHER | 1 | 377 | 377 | 6.7E-199 | – | |
| Gene3D | 1 | 141 | 141 | 3.3E-23 | ||
| SUPERFAMILY | 56 | 220 | 165 | 1.55E-41 | ||
| ProSiteProfiles | 57 | 131 | 75 | 14.914 | ||
| SMART | 58 | 127 | 70 | 2.3E-15 | ||
| Pfam | 59 | 125 | 67 | 1.2E-12 | ||
| ProSiteProfiles | 142 | 220 | 79 | 16.313 | ||
| Gene3D | 142 | 221 | 80 | 5.5E-23 | ||
| CDD | 143 | 217 | 75 | 4.42235E-49 | – | |
| SMART | 143 | 216 | 74 | 1.8E-22 | ||
| Pfam | 144 | 214 | 71 | 6.0E-18 | ||
| MobiDBLite | 219 | 264 | 46 | - | – | |
| Gene3D | 242 | 341 | 100 | 1.2E-23 | ||
| SUPERFAMILY | 250 | 342 | 93 | 5.1E-23 | ||
| ProSiteProfiles | 264 | 338 | 75 | 16.278 | ||
| CDD | 264 | 337 | 74 | 1.66159E-36 | – | |
| SMART | 265 | 334 | 70 | 1.3E-16 | ||
| Pfam | 266 | 332 | 67 | 2.9E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi1g1v0396400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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