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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0493500 |
| Transcript ID | LotjaGi1g1v0493500.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ELMO domain-containing protein, putative; TAIR: AT3G60260.1 ELMO/CED-12 family protein; Swiss-Prot: sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A; TrEMBL-Plants: tr|A0A151QWE0|A0A151QWE0_CAJCA ELMO domain-containing protein A; Found in the gene: LotjaGi1g1v0493500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:100695808..100702319) extracted from Lotus japonicus Gifu genome v1.2.
CACCGCCCTACAACACTGTCACCTCCACCACCACCATCAATGCAATTACCTCTACTATTTTGAGCTACCCTTTTGGGTAT TATTATTATTTTTTGATTATTATTATTTAGACCCTATTATTTAAAACTGAAAATAAAAGTGGTGCAATGCAGTGTAGTGT AGTCTGTCATTCAAAAACGCCATAACGGAGAAAAAAACGACGAAGAATGCGTTAATCGTTTTAGAGAGAGAAACAAAACA AAACCAACTCTCTTCTCTTCCCTCTCTCTCTCTCCTCCATTTCTAACCGTTTTCTTTCTCCTCTTATCTCAGATCTTTGC ATAAACCCTATTCCATTCCATTCACAAAACCATAACCCTCAAGATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAT TTTCTCTGCAATTTTCTCTCTCATTTTCCGTTTGTTTCCCGGAAAATTCTCTCCGATCTCCCAGCCTCTTCTTTCTGGAA GATTCCAACCGTTTCTTGCTCCGCTTTTCGCTCCGCTTCGCTGCTCCCGCTCCTCCGCGTTCGAGTTGAACGACATTTCC GCGATTTTCCGATTGCTGACTCCGCCGGTAAAGTCGGGTTTTCCGGGAAAAACTGGTGGATTCTGGATTTGTCAGAATGT TGAAGATTTCCATCATGAATCCACGGTTGTTGTTGTTGTTTTAGTAGCAGGAAGAAGAAGAAGAACGAGAATTGGATTAC CATTACCATGGATGATAGAGGTGGTTCATTCGTCGCTGTTAGGAGGATTTCGCAGGGTCTTGACCGAGGCAACGCGTGCC ATTCAACTTCTGGTAAAAATTTTCGTCCTTCAATTTCTCTCGTGATTTTCGAGGCTCTCTCTTTCCGTGACATGTGATTC GTTTTTGTTTTCTTTCTTTCTTTCTTCACCCCAATTTTTCACGTGTCTTTGAATTGAGATTGTGCTCACTTGCGTTGTGA TTGATGTCTGCGGGTATTCAAAATTGCGTTGGTGGGTAGATTAACTACTTCTTACTGTATACATGATTTTTTTATTCATT TGATTTGATTGGGTAGAGTATTTCCTATTTGAGATCTGTATCTAGCTCAGATTACTATGAAAGATGTTAGTAATTTTAGT TTTGAAAGTTGTTAACTATGCTTAATTTATAAGTATCATCATCTTGGTGGGGTTACCTCATAGATCTAGCATTCATGATT TCCACATATATAGGAAAATGCAGATATCTAATTGAGTACAGAAACAGTGGAAATTTGAAAGTAAAGCAAGCAGGTGGTGT AGCCAAGTGGCTAGCATAATGATGGAGAAAAAGCTAGTGGCTAGCATAATGATTACAGTATAGACTTCAAAATATTTGTC AATTGAAACATCATTTAGAAAGCACTGGAAAAGGAAATGGAGAAGAGAGATAAATAATGATTGTTTATATAAGATGAGTG CTTTTGGAAGCTAATTAAGCTGAACAGAAGTGTTGATTTGCTGATGATAATTAATTATTAATAGGACACATGATTTCTGT CGATCAGCTTGTTATAAAGTTGTTGCACAAAATTTGGAATCTCAATTTTCATTTATGGGCAGTTTTCTTTTGTTACAGCT GAGTTTGTGACAGGATCAACTGCATGGATTGGCAGAGGTTTGTCATGTGTCTGTGCACAGAGAAGAGAGAGCGATGCTCG GCCCTCTTTTGATTTAACTCCATCTCAGGTTAAATTTTTTGTGATTTAATACCTAAGCAGCAATTTGATACTCAATAAGT CATTCTGTTAATTTTTCTATTGCCATCTTGCTACAAACAAACTACAAAATTATATGTCGTATGAAGTAATGAAAAACATT TATTGTGACTATGTGCTCATTTTATGGTTTCTGGAAATTTTTTAATTTACGTTTCATTGAGTGCTTGCTATGAAGTTGTA AGAATTTCCATCACGCCAATGTTTCACAAAGTTGGCTTTTATGTTTTTGATGTTTGCTTGTGATGCGTACCTTCTGACAT CAAAATAATATGTCACTCTGTGCTTATTGTTTAAAATTATGGCATGATAAATTCTCAATGCTGAACTTTCAATTATCAGG AGGAATGCTTGCAGAGGCTACAGAGTCGTATAGATGTTCAATATGATAGTTCTATCCCTGAGCACCAGGTAACCTTTCTA TTAATATTCTCAAGTCTCTGCGATATGACAATAACTAAGAGACGTCATGCCTGTATCCATAGTTTTCTGTGCTGTGACTT ATTCTTATTACATATGTGCAATCTTCTTCTATTAATTTTGATTGTAATCTAGGTTTGTTTTTATGCATTATCTTAGGATG CCCTAAGGGCTTTATGGAATGCTGCTTTTCCTGAAGAAGAACTCAAGGGTATGATTTCTGAGCAGTGGAAGGACATGGGC TGGCAAGGAAAGGATCCAGCAACAGATTTTAGGTAGATATTATTCTGGTTGTTTTCATGTCAATGCCATATGTTGTCTTT CTAACTACTTTTGCTAATTATTTCTTTGTGGAAATTTGGCAGGGGTGGTGGTTACATATCATTAGAAAATTTGCTCTTTT TTGCGAGGAATTTCCCGGTATGCTCTATTTCTCCTTATTTTCACTCTTTCTAGTGTTTTAATAAATAATCTGGAGACCAG GTTTTCTCTTGGGTTTATGGAGATAGTCTTGCTATACTACATCAAAATCTTATTATCTTACTTTGACATTATTTTTCATT CAGACCTATACCTTATTTTTATTTGTTTTTAAATCTTATATCCCATATATCTGTCCATAATAGTAATACCATACCTCTTG TTTCTTGCATGCTTTCTTAGATGATTGATGTAAGAAAAAAGGCTAACAGGTACCAATTTAGCTGAAGTCCTTCCTGATCT AAACAAAATTCTTGTGTTTGGATTTTGTTCCATTGCTTTATCTTTGAGGCAGTATATGATTTTCTATTTGAATTATAAAT AAGGAATGAGAATGATATTGAAATTGATTGATCTTGTTTTTCTTTCCTAATGGCTTCTCTATCAAACTATACCGGCTCCA TGAGTTCATGTAAACTATAAAATCATGCAACTTTGTAGTTAACTTTTACTCATTGTTCACCATTGCCCGAACATTGAGGA TCTGAGGACCAATGTGGACATTATATAAATTCTGAATTGAGATAATATGCCTTAAATGATGAAATTCTCGGCAGATAATT TTAAAATATGATGTGTCTATGGTAGTTTAAATCATGTTTTGACTCGTAGAATCACATGATTTTACAATTTTTGATGGTCT GACCGATTCGAATCGTGGTGGAATTGCGAACCAGTGAAATCGCCACCTCAATCAGTGGAAGTAGGGATTTCATCGTGCTG GAGAAGATATGGGAACCTGTGACCCGTTTTCACTTATAACCCGAAACCTATCTCTACCCTAACCTGAAAGGAAAGATTGG CTCTTCTGAGGCGTTTCATTTTCAAGCTCAAACATACCTGAAACTGAGATTGTCAAACATTGATCCCTTCCTTCCTCTTT TGCAACTGTGAGATTGAGAACCCATCTCTCTGTTTTTTCATCTTCTATGACTGCGATCCTATTGCCTATGAGTTTGAAAG CATTGAACAATCCTCACCTCATGAGAGTTAGGTCCAACCCAAATTCAAGACTTAGTTGTGCTATTTTATATGCATATATA CGTAAATTTTGTAAAATCGTAAGATTCATGTTAGATTCCATGATTTACAATATTCACTCCCTTTCCTGATTCTAGGTAGA ATCTAAATTCTATACCTTAGATGTGTCCTCTTTTTCATGCTGACATCTCAAGCTTTGCTGCATATTTTACGCTTTTTTGG CGTCGGAGAATAGACTGCATGATACTTTTGTTATGAATGGTTTTGTCCTATAGGAATAGTTATGTATAAGACACATGGCT GTGCTCTTTCAGATTTTATTAGACACATTTTTTGTATTTCTATAAGACCCTTGTCTCTACAGGTTTTGTCTTTATTAATA TACTATTGGTTCAGTCCCTCAAGAGCTGTCTCAATGACCTTAAATCAAATATGTTTTTGCTTATTCATGTCTCTCTATTG CAAAACTTATACATTTCGTTTTGTAGAAATCTTTTCAGGACCTTTTACGCAAGCAGGAAGGAGATCGATCAGTGTGGGAA TACCCATTTGCTGTTGCTGGTGTTAACATAACATTCATGCTTATTCAGATGCTGGATCTTGAAGCAGGTTTATAAGTTTT CCTCTTATTGTAATCTTCTACTCTCAACATAGATCATGTCTATGAGGTATAGATGCCTATACAGGCATATTAATTTCTGC CTTTCGGACTCTGATATGTCAACTTCATAGAGCACTACCAAGTTGAAATTGCTTTGAATTTAAAGGGCCCTTTGAATGCT ATTTCCGACGTAAATATGCTTATATTATTTTTCCATTTACTTTTGCATACTTTATTGTTCCCACAGTCACCAGTGATCAT TATCTGAATGATTGTTGGTGCTCTGTTGTAATTCTAAGGAATTAGATTAGTTGTGTTAAGGGCCTGTTTGAAATAATAGA AGTTGGTATTCCAATCCAATGACATCAGTAGCGTCTTACATTCACACCCAACCTTCAAACATTTTTATGACAATGATTTG CACATTATACAACTTACTAAAATTCTAGAAAGGCAAATAATATTGCGAGGTCCTTGATACATTTTGGTTTCTTTTACTTC ATGTAACATCGCTCTTCTGTTGTTATCCAACATATGGTGTGTTACCAACCTTATAATATTCTCGACTATATTTTCTGATG AGATATCATGAGAATACATGGCATTTAATACTGGTTTTTGCATGATAGATGTCTTTCCCAACCAATGAATGTACTTTGAT TATGATGTTATCTGCTAATAATATTATGTTGATTTCCTTGACAGTCAAGCCACGGACACTTGTAGGAGCAACTTTCCTTC AATTTCTTGCAGGTATAGCCTTTATTGTTCTGCCTGCTAATCAATTAATTTCACTTGTTTTTTTCTTCAGTTAGGAAGGG AAGCAGGGTATGAAGGCTTTGGTGATGAACATTTTTCTGACTATACCTTTCTTTCATCTTTTTTTCTCTGATTGTTTTGA TTTCTTTCTCTCACCTATGTCCGGGTGCCTATTTCATTTGTAATAGATTTTTGAAAATCTTTCATAACAAATGGCATTGC TCTAAGAAAATACTTGTTTTTTAAAACATTATAGTTTTTAATAGATAGTGGCTGTCCTCATTGTATGTCTGTTTGCTGTT CTGAGTAACTAATTTCATTTATGTGACAGAAAACGAATCAGCTTTTGATCTTCTCTATTGCATTACGTTCAAGCTGATGG ATCATCAATGGCTTTCTATGCGCGCATCATACATGGATTTTAATGTAATGTATTTCTCTGAGTATAATCCATATATAGGG AAAGATGATGATTCTAGCAACTTTATTAATATATTTTCCTAAGATTGCTAGTATCTTTGCTAATATGATATATGTTGCTT ATAACAGACAGTGATGAAATCTACACGCCGTCAGCTGGAGAATGAGCTTCTGCTTGAAGACATTACACGGCTTGAAGATG TACCCTCATACAAACTTCTCGCACGATAGATATCGACGCCTAGTCTTCCAGTCCACTAGTTTTAACTTGAAGGTTGTTGT ACTTGATGTGATGCTACTCTTATAATTTCCACTCCTTCCACTTCAGCATTTAACCTTCTAACATTTGAGTGTTAGACCAA GGCAAGCCAGTATGATGTCATCAAGGCTGTGAGTGCAGTAGTTCTTCTAATCTAGTTGGAGGATGACATTGCTGGCTAGG GGAAATTTGAAATGTAGGTTTGCTTGGTACCGAAAAGAGATTAGATTGTAATGAATTGTGGTGTGGCTATATATTTTCTT TACTTTCCATTAAAGGGGAAATACAGCTTGCAGTTGCAGTATTGTAATTCAGGCAGTTAGTCCTTAAGTTGGTAGCTACT GTCTGGCCATGTTTGTGAAGCAACTTGTATGCATATTTGTTTTGCGTAAAAGATTCAATGTTTGAGTTTGATGAAAAGTA TTTCAACTACATTTTACTTTGTTTCAGGAAAATTACGAGTTGAGACTCATTTCACTCACACCTACATGAGAGATAGGAAC AGAAGTGAGGGATATGATGAATTATGTAATAGGAAAGTAATATAGAGATAAGAAGAAAAAGTGAGTGGAAATGAGATAGA AGAAAAACTGTATGGGAATGAGATAAGAACAATTGTTTATTTGATACATGGTTTTAAATCTTAGTATGGGCTTTTATCTT ATCTGTTCAATAACTTCCAAATTCGATTTAGTATCTTCGGTGTTCAAATTTTGAATGGTCCATGTGAATTAGTGAATAAT CACTGCTTGATCCAGGAGTTTTAATTTAGTATCTGCAAGAGCTTTGTTGGGCTACTCGGATTTGTTACGACAATACTGCA TATGAAAGCAAGATGTCTCCATCTAGCTCCTG
CDS sequence (LotjaGi1g1v0493500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGATAGAGGTGGTTCATTCGTCGCTGTTAGGAGGATTTCGCAGGGTCTTGACCGAGGCAACGCGTGCCATTCAAC TTCTGCTGAGTTTGTGACAGGATCAACTGCATGGATTGGCAGAGGTTTGTCATGTGTCTGTGCACAGAGAAGAGAGAGCG ATGCTCGGCCCTCTTTTGATTTAACTCCATCTCAGGAGGAATGCTTGCAGAGGCTACAGAGTCGTATAGATGTTCAATAT GATAGTTCTATCCCTGAGCACCAGGATGCCCTAAGGGCTTTATGGAATGCTGCTTTTCCTGAAGAAGAACTCAAGGGTAT GATTTCTGAGCAGTGGAAGGACATGGGCTGGCAAGGAAAGGATCCAGCAACAGATTTTAGGGGTGGTGGTTACATATCAT TAGAAAATTTGCTCTTTTTTGCGAGGAATTTCCCGAAATCTTTTCAGGACCTTTTACGCAAGCAGGAAGGAGATCGATCA GTGTGGGAATACCCATTTGCTGTTGCTGGTGTTAACATAACATTCATGCTTATTCAGATGCTGGATCTTGAAGCAGTCAA GCCACGGACACTTGTAGGAGCAACTTTCCTTCAATTTCTTGCAGAAAACGAATCAGCTTTTGATCTTCTCTATTGCATTA CGTTCAAGCTGATGGATCATCAATGGCTTTCTATGCGCGCATCATACATGGATTTTAATACAGTGATGAAATCTACACGC CGTCAGCTGGAGAATGAGCTTCTGCTTGAAGACATTACACGGCTTGAAGATGTACCCTCATACAAACTTCTCGCACGATA G
Protein sequence (LotjaGi1g1v0493500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDDRGGSFVAVRRISQGLDRGNACHSTSAEFVTGSTAWIGRGLSCVCAQRRESDARPSFDLTPSQEECLQRLQSRIDVQY DSSIPEHQDALRALWNAAFPEEELKGMISEQWKDMGWQGKDPATDFRGGGYISLENLLFFARNFPKSFQDLLRKQEGDRS VWEYPFAVAGVNITFMLIQMLDLEAVKPRTLVGATFLQFLAENESAFDLLYCITFKLMDHQWLSMRASYMDFNTVMKSTR RQLENELLLEDITRLEDVPSYKLLAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 266 | 266 | 1.3E-163 | – | |
| PANTHER | 1 | 266 | 266 | 1.3E-163 | – | |
| Pfam | 71 | 236 | 166 | 1.7E-49 | ||
| ProSiteProfiles | 86 | 247 | 162 | 30.498 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0493500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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