Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0496300 |
| Transcript ID | LotjaGi1g1v0496300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | UPF0565 protein C2orf69-like protein; TAIR: AT2G44850.2 hypothetical protein; Swiss-Prot: sp|A0JMH2|CB069_DANRE UPF0565 protein C2orf69 homolog; TrEMBL-Plants: tr|A0A151UBQ9|A0A151UBQ9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0496300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:101136120..101141132) extracted from Lotus japonicus Gifu genome v1.2.
CCAAAACGTAGCTCCTGTGGGGACTAAAGTAAAAACTAACTTTATTTACAGGACCAAAGTGATATTTACCCCTATTTTAT CACCTCCGGCTCCGAGTTCTTATTTTCTCTCCGTGAGCCAAAACACACCGCCAGTGAAGAACCCGGCAAACCCGACCAGA GAAAGAAACAGAGCCATGTGAATCAGATAATGAAGACAAGCGGAATCACTCGCTTCATTTTCAGTACGTGATTGTTTTCA TTTGTTGGAATCACTCTGTTGGCATATATTTTCATTTGGTTACATTAATCCATTGTCTATCAGAGTCATTTTCTTTGTTT ACCCTTTGATTACTACCAGACAACCTTAATTTTCTACCGTTGAACTGCAGTTATACTCACAAAGATAGTTAGGATTTTTG TTTTTGTTTTTGGGTTTTGGGGGGGGGGGGGGGGGGGAGATTGTATAACAACAAAAACTAATTTAATGATTAAGTGTTAC CACACATCCAATTAAACTCCAATGGGTGGTTGATTCAAGTGACACATGTTTCATTAAGTTATCGGTCTTAGGTATTGTAT ACGGAAAAAACTGTTGGGTTTAGATGCTTCTGGCTCGAACAAGATTACCTCCTAGATAACGCAAAATGGAAATGTGTCCA AGACTATGTACAACTCTTCATACTAATTAGATTCTATAAAAAAATAGAAATGTTTTTAATTTCAAACAGTTTTATCTTTT AAAAACATGACCAAATGGTTTGATTCCCCAAAATCTCATATTGGAGGCCGGTGGTTAATAGAAAAAATAGGCACCTCAAG AGTTTTGTCCATCTAAATGGGTTCACCCCAACTAGATTAAGATCAGTTAGGGTCCAAGGTGTTTGTGTGGGGAGTTTACC TCTTGTGTCTATCTCTTAACTAGTAGCTACACATGCTGTTCAATTGCCTCAACCATTGATTTGTTGGTTGGTTTGGTAAA AACTAAAATAATTTTTTTAATAAAGGTTCTCTTTGTCTATATTTTAAGAGCATAAGGTTTGTTTCGTATAGTTCAATGCT GCTTCTTAAGTTGGTCCATGGATTTTGGAAGAATATATATTTATTGCCATTTCAAAATGTGATGATTCTTAAGAATGGAA AACAGGAACATTTATAATCTTATAGATGTCTGAACTAAAAATCTTTAGCTGTGTATATTAAATGGACATGTTAGTTTGAT TCCATTTATGCAGTACACTCAACTTCCAACATTCACTGTGTTTGATGCCAAACATTGTATGTAGATCAATAAATGGAACG TTGGAGTGGGGTTTTGAGAGTCCCACTGCATCCTAACAGCAAGGCATTCCATAGAGTTGGTGCATCTCTCTGCCTTTCTC CGGAAACAGGAACTTTGAGTGTAAGTTAGTTCCTTGAAGTTGAACCCTAAAGCTTATAGATAACAGTGGATATTTCGCTT CACATCATCCAAAAGTGGATTGGTTTTCTTACTTTAACTATCAGTCTTTTAATCTTATGTTTTAGCTGTAGGTATAAAGC TTAGCTTTGTTTTCTATACAAAAGAAAGTTGAAAATCGTGCACTGGTCTGAATGTAAGAGCCCGTTTGGACAAAAAGTGC CTTGGAATGTGTTATTTTTCCGTTTTCATACTCCTGGATTGGTATCAAACGGGCTTTAAGTTGTTTGAGTTACCAATTTT TTAGTAATCAAAGAACCAAAAATGGAAGCATATCAGGCCTAAAAGTATTTTATGTGTGAAAGAGGAGTGCTACAAATTGA TTAATCATTTGCTACAAATTGTAAGTAATCAATGGTTAATTCTTCTGGAATCTGGATTGGTTTATTTTGGCCACTCCCTG AACTGCGGTTGAATTTTGTGGAATGAGAGGTTTTTATATAAAGGTTACTACTTACCACTGTTTGGAAAATGTGAAAGAGG AGTGCTACAAACGCAGTCTCAAACACACTCTTTTCAACACTCTTATTGGTTGAAATTCAAATTCAACCAATAAGAGACTG CGTGTGAGAAAGTGTGTTACTAGCATTCCTCAATATGAAACATAGCATTTTAATGAGGTTGGCTGGTTGCGACTTGCAAC TTCCAATTGAGATGTCACAGTTTCAATTTCTTGGATAAGGATGTTCTCAAACTTGTACATCACTGGTGCCCCTTTGCATA CCGAGTGTTATTTACTAAAAATGTTCTGATTCGTTACAGGTACCTATCGCAAACGCCATCTTTTTCTGCGGTGATCGAGT TGAAGGGACTGGTAACCCAGTGATTGAGCGGCTATCAGATTTACAGAAACTATCTGAAATTGTTGTATCCAAATTTGGCT CTTTCATCAATGCGTGGGTTATTGAGTCTTCTGTTTATAAAGGACCTTTTGCTGTCTACAAGGACTTCATACCATCAGTG AATCAATATGGAGAGCCAAGCTCATACCATCCAATTGGATTCCCGGCATCCACTTCAACTGTCTCACTCTTATCTAATTG CCTTGAAGAAGTATGGCCTGTTCTTCCCCTTTATTATGTGCTACAAAGTTTACCATTTTCTATGACTATATCTAATTCGG GCAGTTATGGAGTTCAATCAAGTAATATTTTGGCTCTTATCGCATAGTTCAAGAATATGAGCATAAAGATATATTTGTGT TGATGGATTAAAATCTGAACCAGTACTGATTTTCATGTAATAATTTTTTTTCTTAAGGTTAGGCTACTTTCTTGCACTTA TATAAATTCCTACTTTTCCCCGAATAAAAGGAGAAATTTCTTATTACATCTCTTTCAGTTATTCGCTACATTTTGCATTT TTATGGATATGAATGGATAGGTGTTGTATTGATTGATGGAAATTGGAGCCAAGCTCCTTAAAGAAAATAAGAAAAATCAC TGCAACTAAAGACTTTCAATGCGAGAATCCCCACTGTCTCCATAAAATTTTCCTACCTTCTCTTTTTCCCTCTCTGCTTT CAATAATTTCTTCTAACGAAATTCATGCCTTCATCTTTCCTGCCACATTTGCAGTGTGCTTAGAACATAAATTCCCATCT TGACCCTGATTCTCATCAACTAACCTTTATAACCATGACTCCTAACCGAATCTTTAGCAGTTGTATTCCATATCCAAACC AGATTCTAGCTTCTTAACTTCTCTAAATTAATGTCATATATAAAGCTTTACATGAGGCCAATATACTACACCAGATGAGA TATCACTTCAGTGATTGTCCAATAGTAAAAACAGTCATTTGCGTCCGTTTGCAACTAGTAATAACTACTTGAAATAATTT CTTTCGATGTTTTGAATTTCTTGTAATGCAGGTAAAGAAAGTCATTTTAGGAAAGCAAGTAGATACCAAGTTTGTTCACA CTCCTTCCTGTTGTTCCTCTCAGCCCAAGACATTCATCCTCGGATTTAGCAAAGGTGGAACTGTACTTAACCAGATAGTT ACTGAGCTCGGCTTCTCAGATATCGGATCTAATCCATATCCACTGGATGCAGGACAGCCAATGGACAGAAAGATAAGCAG ATCAGAGGAGATTTATGTCGTACCTAAAACAAAGGAAGGCTTACTGAACAGCATCAGTGAGATTCATTATGTTGATGTTG GTTTGAACTCTACTGGGGCATACTTAACTAACCTTGAAGTGTTTGAGGGGATATCCAAAAGGCTCATACAAGGAGCTCCT AAACTCCGTTTCATCCTTCACGGAACTCCGAGACAATGGGGCGACAAGCGGCGAGACTGGATTCGGAAGGAAAAGGACGG AATGCTGCATCTGCTTGAATCTGAAGCCTGCAAGAGTGGTGGAAAACTACAAGTATTTGCAAGGTATTATTTTGCTGATA AGCCTTCGAATATGCAGATGCACTTTGAAATCATTGAAAGTTTAGACGTCAGTTAAGTACTTCTTACTTGAGAGGTCCAC TGAAAAATGTATTGATTATCAGGATGATTGTAACTATATAGTGTTTTGTTGGAATGTACCAAAATGGAAAAATGGATGTG TAAATTTTCACTTTTTCACAACATGTGCCATAGTAACATGAAGTACTATCAACAGGTGGTTGGTTCAAGTAGTACATGCT TGATTTTCCTTAAACAAGGTCTCGGGTTTGAGTCTTATGGATGGAAAAAACTCTAGTTAGGAGAGTTAGCCCCACCAAGA CGTAGATGTTTCCCGGCTCGAACAGGATTGCATCCTGTGGAGGATACTTGTCTTAAAAAAAGTAACATGTCATGGAGTAC TTCTGTAAATTTTGGAGTTAGAGCATTTTGATGTGTTTTTATGGTATAAAATTCATGGTCTGATTTTCAACATCGATTTG AGCTTGGGTCTTCGGGTCTAACGAGTTAACCCTAATTCTTACAATGTAACAAGAAAAAATCAGGGTCTAACTTGTGACTT AACCCTGTATTGAAAAAAGAAGTTATGCTGGTTTAAGTCACAAGCAATTCCATTCCAAGATTCTGGCCTATAGACAGCAA AAGAATTGATATTATATGATTTCTAAGCATGGAAAGTCACCCTTCCTTTAACTGCAAAATTAGAGATGCGGTTAACCCAC TTCCTTATTACCTCCAACCTTGAATTCTGCAATATTTCTTGAACTCATAGTAGTTATTGCTTTTATGTTCAAGTATTTAC AAACATACGAAGGATCATGGGGATGAACATGAGTTTCTTGGGAGGAAAAGGTGTGATTCATTTTCTTCCCTTACTTAATA CTGATTTATCTTAGTGTATGTTTGAAAATCCTTTTAAAATTGATTTTGAAAGTCAATCAAATATGGAGATCAGCTTCTGT GAGTAGCTTGTTAGAATTGATTTTGGTAAAAGAGAAACTGATGCAAACATCCTATTGTACTAATGATTTATCGTTTTGAT TTTGTATCACAGCTCTATCAACCACCCAGATGTTGAGTCTGGTAATGAACAAACTGTATAAGCAATTTGTTGATAAAGAT ATCAAGGACTTTGATGCATTCAAAGTTGCCATTATTGATACCTTCAAGTAAGC
CDS sequence (LotjaGi1g1v0496300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACGTTGGAGTGGGGTTTTGAGAGTCCCACTGCATCCTAACAGCAAGGCATTCCATAGAGTTGGTGCATCTCTCTG CCTTTCTCCGGAAACAGGAACTTTGAGTGTACCTATCGCAAACGCCATCTTTTTCTGCGGTGATCGAGTTGAAGGGACTG GTAACCCAGTGATTGAGCGGCTATCAGATTTACAGAAACTATCTGAAATTGTTGTATCCAAATTTGGCTCTTTCATCAAT GCGTGGGTTATTGAGTCTTCTGTTTATAAAGGACCTTTTGCTGTCTACAAGGACTTCATACCATCAGTGAATCAATATGG AGAGCCAAGCTCATACCATCCAATTGGATTCCCGGCATCCACTTCAACTGTCTCACTCTTATCTAATTGCCTTGAAGAAG TAAAGAAAGTCATTTTAGGAAAGCAAGTAGATACCAAGTTTGTTCACACTCCTTCCTGTTGTTCCTCTCAGCCCAAGACA TTCATCCTCGGATTTAGCAAAGGTGGAACTGTACTTAACCAGATAGTTACTGAGCTCGGCTTCTCAGATATCGGATCTAA TCCATATCCACTGGATGCAGGACAGCCAATGGACAGAAAGATAAGCAGATCAGAGGAGATTTATGTCGTACCTAAAACAA AGGAAGGCTTACTGAACAGCATCAGTGAGATTCATTATGTTGATGTTGGTTTGAACTCTACTGGGGCATACTTAACTAAC CTTGAAGTGTTTGAGGGGATATCCAAAAGGCTCATACAAGGAGCTCCTAAACTCCGTTTCATCCTTCACGGAACTCCGAG ACAATGGGGCGACAAGCGGCGAGACTGGATTCGGAAGGAAAAGGACGGAATGCTGCATCTGCTTGAATCTGAAGCCTGCA AGAGTGGTGGAAAACTACAAGTATTTGCAAGGTATTATTTTGCTGATAAGCCTTCGAATATGCAGATGCACTTTGAAATC ATTGAAAGTTTAGACGTCAGTTAA
Protein sequence (LotjaGi1g1v0496300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MERWSGVLRVPLHPNSKAFHRVGASLCLSPETGTLSVPIANAIFFCGDRVEGTGNPVIERLSDLQKLSEIVVSKFGSFIN AWVIESSVYKGPFAVYKDFIPSVNQYGEPSSYHPIGFPASTSTVSLLSNCLEEVKKVILGKQVDTKFVHTPSCCSSQPKT FILGFSKGGTVLNQIVTELGFSDIGSNPYPLDAGQPMDRKISRSEEIYVVPKTKEGLLNSISEIHYVDVGLNSTGAYLTN LEVFEGISKRLIQGAPKLRFILHGTPRQWGDKRRDWIRKEKDGMLHLLESEACKSGGKLQVFARYYFADKPSNMQMHFEI IESLDVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 324 | 324 | 9.4E-94 | ||
| Pfam | 158 | 289 | 132 | 8.4E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0496300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…