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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0584500 |
| Transcript ID | LotjaGi1g1v0584500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc-finger domain of monoamine-oxidase A repressor R1; TAIR: AT3G24750.2 hypothetical protein; Swiss-Prot: sp|Q6D409|HIS7_PECAS Histidine biosynthesis bifunctional protein HisB; TrEMBL-Plants: tr|A0A072TK59|A0A072TK59_MEDTR Uncharacterized protein; Found in the gene: LotjaGi1g1v0584500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:112392570..112395652) extracted from Lotus japonicus Gifu genome v1.2.
GATAAGTCCCATGTTACTCTGAAATCAGAATCATAAGCCAACTATTCCCCACTCACCGCTTGGTTGTCTCAACATTTTCA TTAGATTCACTGCAATTTTCTTTGTCTTAATCCCACCATAGGCCTCAAAGACTAGACAGGAATCTTTTGCATCCAGACAG AACAGATAGATCTGCTGTGCTGTTCATTTGACCAATACAGTCATCATACACAGACACACATACAAAAAAGTTATAGTACT TAAACTTGGAACAAAATATCCACAGTACACATGCAGGTATATGCTTTGTTTATGTTATGATAATATATATATTGTGGATG CACCATGCATTATTTACAGGAAAGTTATAGTAAATCTTTTGGTGTGTGAAAGCAGATTCTTCATTGGCTCTTTAAAAGGG CACAAGAACAAGAAAGAAAGAGCAGCACCTTCAGGGAAGAAATCAGAGGTAAGATTGACTCTTTCAAGTTTCTCAACTAA TCTGATTAGGTATATAGTAGAACTGCAAAACTTCTTTTTGTTTTCAGAAGTCCCACATTTGCTATGTATATGACCAAAAA GAAAACAACCCTCACTGTTAAACTATATTTTGGAGTTGAGTTAGGCCTAATTCAAATTTTAATATTTTGGTATACAAGAT GAAGAAATTTAATGCAAATATATTATGTTTATTTTTTTGTGTTTTAATTTTCAGCACAAAATGGAAGAGGGAAAAAGGTT AGTCTACTGAAGCATGATGGATCATATAGAAGAACAAAGAGATTCGAATCATGCAGCAAGAATCTGAAGTTATTGGCTTT TGTGTATAGAAAAGACATTCCGAAGGCTTGCTTCTACAAAACCATCAACTTAAAGAGATTAGGAAGCTTTCATAGAAGGC ATTTTCTGATCTCTATGAAAATGAAGAAAGAAGAATCATCAAGAGAAGAAGGGGTTGTTACCAAGACAGATTCAACAGCT CATGTGGGAAACAAGGTTTTGCCTATAACTGAGGCACCATTGTCATCCTCAGCTCAAAGAAATGGCCAATGTGATGCCAC AGAAAATAAAGATCAGAGCAAGGGGGATAGGAAAAAGACCATTTCGAAGATGAAAGAGCTAATTAGATGGGCTGCTTTTT CCAAAACAGAGAAAGGAGGAAAATTCTATGGAAAAAAGGTAAACTATTTTCAACCTCTTCAATTACCCTCAAGTCCTTAA CTATATATTTTCAGCATGTGTGCTTTTGATTCATTGCCCTGAAGACCATGTGTGGGGTGGGTGATAGTTCATTTATCTGC ACCTTCTTGTCACATTATATTGTCATGTGTGTATGTTGTAGCCATATTAAATTGCCATGATGATTAATTATTTAGCACCC TTTAATTAGCCAAAAGAGAAATGATAAAAAAACAGTCTATAAAACCAACATCCATGTGGTTGGTTCAAGTAATACATGTT TGATTTCCCCTTAAACAAAGTTTTGAGTTCGAGTTTATTGTATAGAATAAAGTCAATAGACCTCACTGAGAGCTAATCCC ATCAGGATGTGAATGTTTTCGGCTCAAACATGATTGCTTCTAAAAAATATCAGTGTCTCACACCAAAAATACAAAAAAAC ATTCAGAAATATACTAAGATGTTTGCCAACTCTAATTCTTAAGCTAGTTCATCAACTGAATTGATAGTACGCCAGAAAAA ACATTTTACATCACTTAGCTTATTTTTTACACTTTACAATGCTAATTATTAAACAAGATCATGATCATGGAATTGTTATC AGATTTTAATGTTCCGGAGGCGTGGAACCTTGAAAGCAGTTCCGGATGAGGATCAAGTTTGCAGTGAGTCACCCAAGATC AGTTTCAGATGGGATGTGGAAAGCTGCTCCACCACTTCCTCTGCCTACTCAGCTATCTCAGTAGCATCCTCATCAAGATT TGGACAAAACCAAATTGCAACTTCCACCATATCCATTCCTCATTCAGAGAATGGCTGTAGAAAAGGAAGCTGGATCACAA CAGACTCTGAATGTAAGCCATGCTAGTGCAATATTTTTAATTAGACTTAATTGCATTTTTAGTCTTTATAGTATTGGGAA TATCTGATTTTTGTCCCTATAATTTAAATTGATCAAATTAAGTCCATTTACTTTTTAAAATTGAACAAATTTGATACATA TGTTATCTTTTCATCCAATAATTAACAGGAAAATTTGACATATATCAACTTTTTGACGTGGAAAGTGACATAAATCGTCT TAATAAGACATTCACGTAGGAAATTGCGATCATTTTTTATTTTTTTGCTAATTATTAGATTAAGAGTTAATGTTTGAATT ATAGTTGATCAGTTCTAATAATTTGCCTTCTATTTGTAAAATTATAGAGACGTTTGATGAAGACTTTGAATTATTTTTTT GTCTAAGAACAGAATTTGACTAATCCTTCCTTCACCATATTTTTGTTTGATGAGCAGTTGTGGTGCTGGAGCTATGAAAT TAATGTGTACAGAAGATATCCTTTGTGTGGTGAAGTGGTAGCAGGCAATCTACGTCAGGAATTAATTCATGCTCTAAATT CGAGCCTTGTTCGTGGCTAATTTCTATCAGATATTTTGTGAAGATTTTATTAACCAATGATAATAGGGATTGAAAAGCAA GAGAAAGTGATGCAATGGCTCTATTTAATTATCAGAATGTGCTAGATGGTGATCAAACTGATCGATCTTACCATGGGGAT GAGATGAGAATGTCTGGCATCTACATAAATAGGGTATAAGTTATTTAGTATTTGATGACTTATGTAATTAATGTAGTTGA GTTTTACAGGTCATGGGACCTTTGGTCTATTTCCTGTAATCTATGATAATCAGTATGGATGAGTATTAGAAATGAAAGTT TAATGTTGTTTATAGGCTAATATAAGTCTTATACTCTTATGTGACTTGTTGAACTTGGAAGCGCGGTCTGAAAATGACTT TTAGAATAAGGTGAGTGTGTTATTGGGCTTAATTGTGGATGTGGTTAAAAAATCTTAATGCAATTGGACCCAAAGCACTC AATGTTATGTACTTTTATTGTCTCTTTCAACTATCCATTGTGA
CDS sequence (LotjaGi1g1v0584500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGATTCTTCATTGGCTCTTTAAAAGGGCACAAGAACAAGAAAGAAAGAGCAGCACCTTCAGGGAAGAAATCAGAGC ACAAAATGGAAGAGGGAAAAAGGTTAGTCTACTGAAGCATGATGGATCATATAGAAGAACAAAGAGATTCGAATCATGCA GCAAGAATCTGAAGTTATTGGCTTTTGTGTATAGAAAAGACATTCCGAAGGCTTGCTTCTACAAAACCATCAACTTAAAG AGATTAGGAAGCTTTCATAGAAGGCATTTTCTGATCTCTATGAAAATGAAGAAAGAAGAATCATCAAGAGAAGAAGGGGT TGTTACCAAGACAGATTCAACAGCTCATGTGGGAAACAAGGTTTTGCCTATAACTGAGGCACCATTGTCATCCTCAGCTC AAAGAAATGGCCAATGTGATGCCACAGAAAATAAAGATCAGAGCAAGGGGGATAGGAAAAAGACCATTTCGAAGATGAAA GAGCTAATTAGATGGGCTGCTTTTTCCAAAACAGAGAAAGGAGGAAAATTCTATGGAAAAAAGATTTTAATGTTCCGGAG GCGTGGAACCTTGAAAGCAGTTCCGGATGAGGATCAAGTTTGCAGTGAGTCACCCAAGATCAGTTTCAGATGGGATGTGG AAAGCTGCTCCACCACTTCCTCTGCCTACTCAGCTATCTCAGTAGCATCCTCATCAAGATTTGGACAAAACCAAATTGCA ACTTCCACCATATCCATTCCTCATTCAGAGAATGGCTGTAGAAAAGGAAGCTGGATCACAACAGACTCTGAATTTGTGGT GCTGGAGCTATGA
Protein sequence (LotjaGi1g1v0584500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQILHWLFKRAQEQERKSSTFREEIRAQNGRGKKVSLLKHDGSYRRTKRFESCSKNLKLLAFVYRKDIPKACFYKTINLK RLGSFHRRHFLISMKMKKEESSREEGVVTKTDSTAHVGNKVLPITEAPLSSSAQRNGQCDATENKDQSKGDRKKTISKMK ELIRWAAFSKTEKGGKFYGKKILMFRRRGTLKAVPDEDQVCSESPKISFRWDVESCSTTSSAYSAISVASSSRFGQNQIA TSTISIPHSENGCRKGSWITTDSEFVVLEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 270 | 270 | 3.3E-108 | – | |
| PANTHER | 1 | 270 | 270 | 3.3E-108 | – | |
| MobiDBLite | 126 | 141 | 16 | - | – | |
| MobiDBLite | 126 | 154 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0584500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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