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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0702500 |
Transcript ID | LotjaGi1g1v0702500.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | DENN domain containing protein, expressed; TAIR: AT2G20320.1 DENN (AEX-3) domain-containing protein; Swiss-Prot: sp|Q6NXD8|DEN5B_DANRE DENN domain-containing protein 5B; TrEMBL-Plants: tr|K7MYT4|K7MYT4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0702500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:127078170..127086977) extracted from Lotus japonicus Gifu genome v1.2.
CCCCTCTCACCTATGACAACCAAAATAACCATCTCCTTCTTCCCTCTTCCACCTCTATATTTAGCATCTCTCTCTCTACT CCCCCTCCTCTCGCTCTGTCCTGTCAAGAAGCCTTAGGAACCACCAAAAAAGAGGTACATTTTGTTCCTTCTGGTTTTCT TCCCATCATCACAACGCCTGCCATGTTGCATGCTTGTCAATTTCCCTGCATTTATTGACTCTTGTTTCCGTTACAAGTAA CATACGTTGCTCATTGTTGGCGGTGTAAATTGTTTGATTCGCCTCTTTCATTCTTTGCACGGTTTTGCTGCCATTAATAG CAGAATTGGCAATTATTATTATTCTTCGTTTCAGAATTCAGAAACAGGTTGGTGCCCATTATTATTCTGGTGGAAAAGTT TGAATTTTTGAAAAGGAAAGAGGAAAAATATAACAGAATCTACCACCCCAGAAGAATCATAAGATTATCTCATCATTGAA TTTTATCAAACGTTCATTGGGGTTCAGTTATGTGTGAGAAAGTTAGGACCTTTGGAATAATTGATAGGGTATCCTCATTT CAAATTATTATGTGGTAGAATTATAAAATTCAGTGGAATGGTATGTTATGGTGTTGTAATTTTGAGGCTGCCTTTGAATG TTGAAGTGAAACTTGGGAGCATGAGCTAGGTGTATATAAATATGGACACAAAAGAAGAGGCCGAACCTAATGAGGAGAGG CCCTCGTCGCCGATGTGGGTTCTGCATCAGTTATCTGAGGGAGCATTCAGAGTTGCTGGGGAAGCATGGCAGAATATGTA CTCCAGTGGTGGCGGCGGCGGTGATGGTGTTGGGTCAAGCATGCCACAAATGGGGCCTGGTGCTCATAGACGCTGTCAAA GTGAACTTGTTACTAAAGGATTTCAACGTAGTAGTAGCTTTCAGAAGTTGAAGTGTCACGTGCAAAAGGCCTGGCGGTGG AGTGGCAGATCCCGCGATGAAAATTCCCTGCCAAATTTTAATCCTGAGGTCATGGCAAATCAGAAACGTCAGTGGTATCA GCTTCATCCCAAATCTATGGTATTCCATTTCTAGAATCCCTTCATGTGCAATATTTCTTAATTTGTAGTCAATCATGTCC ACTAGCATAGTACTATGCATGTTTCACCGCAAAGAAGAAATCATTTTCCTTCCTCAAATAGTACTATGAGTGTTGATGAT TTTGATTGCTCAAGTTGTTCTTAGACTCATATGGTTAACATTGCATGCTAGTATTTGAGTAACGTGTTAGAAGGTGCTTC TTGTGGATTTGGAATATTAAGGCATTATTGCACTAGCTATTAGGAGGTGATTAGTGTCCCTTAGATATGCTTGTCAGAAA TGTAAACTTATCAGTCTGTTGAAGCAAGTCACTGTGAATATTACTGTAGGATTCTGTAAATTATAAGGAGCCAACCTCGC TGTTTGAACATTTTGTGATTGTGGGGCTGCATCCAGATGCTAATTTGGAAGTCGTGGAGGATGCATTTGCAAGAAGGAAG AAGTGGGAAAAGGAAAGATGTGAATTTCCAGATTTGAAAATGTTGCAGCAACAGAAGCCAGCAGAACCAACTTTGGAACC TCAGGTTTATTACATATCAGTCTTTTTCATACATATATCTGAGAGGGAAATTTTTTTTGTTAGAGAGAACAAGAAGAAAG TACAACTAGGGAAGATACGATATCCTCCAAAGCAGAGTAAATAGAAGGAAACAAAGAATAAGAAATATTAATTGGCATTA TACATATCTGGTGTCTGGTTCTCTTAGGTATTTTTAATATTAACTCCACAAAATTTCTTAGCTTACAAACTGTAACTGTT AGAAGTATAATATAAAACCATTCGTGTGTCCTTTAGCCAACAAGTTAAGATTTTGGGATAGTTGGTTCATGACAGGGTAT CATAGCCTCTATGACCAAGTGGTCTAGAGTTCGGTCCTTGTTGCCGCTCCCATATATTCCAATAAAGTTAAATTTCAGCA CATGGTAGGTGAGTCTGTGCATTGTCGACGTTTCTAGCCCAAGTGTGTTCTTGTGTGAGGAGGCATGTTATAAGTATAAT ATAAAACCATTCGTGTGTCATTTACTAACAGCTTAAGCTTTTGGAATAATTGGTTCATGACAGTAACCTATTCTTCCCTA TTTATGTTTACAATTTAGTCTATTGCTATGAACAATAGGTTCTTTGCAGATAATATCATTTTGTGAACCTGCAGATTTTG TTCAAATATCCACCTACAAAGAGGCTAACAGTGCGTATGAAGGATTTAGCCTCCTTTTGCTTTCCTGAAGGTGTTAAGGT CCGTTTGACACTCTATTTGTACTTAATCCGGTCTGTGAATTTCTTTTTTCTGTTAAATGCTACCTTATAATATGTCTGGT ATAGTTTTCCATTGTTTGCATTTGGAGGTACTAAATCAGTCCTCTCCGCTTGCACTCTTGCCCCTTCTTTGATATGTAGT GTGAAATGTTTGATTTGTCCTGGGGTTGGATGATCTTTTTATCATCACAGTGCAGCATATGAATTATGAACAAAAAAACA GTAAGCTGAAAGATATTTTTCATTCATGGAACATATACAAAGTAATTGTGTTTCTATAGAATACATTCACAACAACCTAT TAGGGAAAAGAGGAGATTATATATAGATTTAGATAAAAGGATTTCTGAATTTAAAATACAATTTGTTCTGATATTAACTA TGTGATAAGTGGATGGCTCCCACAAACATTATCTATGTCACTCTGGATCAGGAATAGAAATAGGTGGAATCTAGAGAAAT CTTCTGTTCCATACTGACTTGCATTCATAGGTTGTGGTTGGATTGGCTGATATTGTTGCCCTTAATTTGTTATTTGTTTT GCCATCTTTTATATTTGGTAGAATTAAGTTATGAAATCAAATGCTACTTTCCCCACCAACTGTTTCATTTGTTGAATGTT GGTTTACAGGCATGGTTGCTGGAGAGGACTCCATCTTTCAGTGAACTAAACGAACTTGTCTATGGACAGGTATGCCATAT CAATCTCGGTTTATCTTTGAGAAAGCGGTTAATTTTCTCTTTAACTTCCTTGTTAAAGCAATTCATCATCTTTGATTTGT CAAATATACTGTTGGAGATGATAATGAGTTCATCCTACATAAGCGTAATTTATTATAGGCTTAAGTAACAAGGCATGCAT ACAAGATTTATGTTTCATGATATTTCATTTTTTTTGAAAAGTAGCATTGGTCAATGAAATTCTTGTTTTATAACCTTCCA ACGAGTGCTCACCACCTTTGACACCAAAGATAACATTTTTTCTTTTGTTTATCCTCTATAGGAGCATTTAGGAAGAGACG ATCTATCATTTGTCTTCACACTCAAGGTAATTTCTATATTGGCATCTTCTCAACTTTAGACTGTTAGCTTGATATGGTTA GCATGGAAAAACAGACACTTAAAAATAGTATCTGTAACATGTGCTTATGTTGGACACTTAATATCAGTGATTGCTAAAAC ACATTATGTGTACCTTGATCAGGCAGTAGACAATACAACACTTTATGGAGTTTGCTTACATGTTCCTGAAATAGTTCAGA GGCCCCCTGGTATCTTAGGCATATCATCTCCTCATTCTCTGGTTTCCAGCCGTTTTATGGTTTCTGCACCTCGATGTTAC TGTCTTCTAACTAGAGTTCCCTTCTTCGAGTTACACTTTGAGATGTTAAATAGGTTAGCATTATTACTGGCTTATTGACA TGTACTTAGTCACCTTTTTCCAGTCAATAGAATTCATTGTTTCTTACTTGGTTGCAGTCTTATTGCACAGGAGCGTTTGA ATCGGATAACTGAGTTTATAAATGAGATTTCTCTCACTAGTTGCCTTCCACCATCACCCAAACTGGATGATCAAATGAGT TCAAATGCTAACTCCCCAGATAGGCAGTCATTTAGTGACTGGATGTCTTGTGCAATTCCTCTTGATGGTGCAGCAGTCAT TACTGCCGCTGCTGCTGGGCTTCTATCTGATGATGAAATCACACAGTTATCACCCAAAATATGGGATTCTCACTGTCAAT CTCCTGCAAGTGTGGCTGCCAGCGATGCTTCTGATTTCTATCAGTTTAGAGACACAGATAAGGATGGCAGAAATAATCTG CAGGATCATAGTAATGATGATTTTGAGGCGCCAGAAATTCAGGAGACTATGGAAAGAGTGCATGGAAATTGTGAAGGTGG CCCAGTTTCTCCCATTGTTGGAACACCTCAATCTTCTAGGAGTCGTGTCTTGGAGCGTCTTGCAAGTTCTGAGTCTCTTT TCAGGTGGTAGATTTCTAATTATGATATTATGTTTCAATTTTACTTTTGATATACTTGTATGACAACTTTTCTTTAATTT ATTGTGCTGAGATATGCTTATGGCAATAGTTTGTCTCCTCGTTTGAACATCCTTTTTATGGTGCATAGATTTTTTAGATA TAAATGGTTCATTTGTGTTTTTCTTCTTTGTTACATTTATCTTTTAGTTTCAATTCAATTTTAATATCAATTGTTTTTAT TGGCAGTCCAGTTAGAAGCATGGTATCTGAAGATGAGGATGATCCTTTTTCAAACAACGAAAGAGATTACGGAGATGATT ACTTAATGGAATGGGCTATGGTTAGTGTAAAAAGGTTGCCTGTTTGTTTTGCATTGGTTAATCTTAGGATGATGTTTGAT TAGAATTTAACATCTTTTCTTTGTTGTGAATGGCACTGATAGGAGAATAAGAATGATTTGCTACAGATAGTGTGTCGATA TCATGCTCAACCTATTCCACCTCGAGGGAGTGAGTTTGTTTTTCACCCTCTTGAACATCTACAAGCTATTCAGTATATAC GACATTCTGTTGCTGCTCTTGGCTTTGAAGAAAATTGTTTTAATTGCTCTGAATCGGCTCAGGTAATTCTTAAGTGATTT TTAACGCTATATTTGTCCACAAACTTGTGCATTTTTTACAATTGTACTTGGTAAAAGGTCAATTCGAAGTTGGCAGCTGC TGAGGAAACCCTTGCATTATCAGTATGGACGACCGCAACTACGTGTCGAGTTCTGTCCCTTGATAGTGTAAGCACATATC CATTTGAAGTTCAACAATGTTAATGTTTGTAGATACTGTTCTTAGACATCATTTCCGGGCTGCAGAAATCTTCTAAATAT TTTTCTCATTAATTTCTATTTTTACTGTTTTATTTATTTTGAGATTGATTTTTCTCTTCTCTCGTGCTTGATTTTCATGT TGTTTTGCTGTTAATTTATTCTAGTTCTTGTACTGGCAGGTGCTGGCATTAGTTACAGGAGTTTTGTTGGAGAAACAGGT GGTAATAGTGTGCCCAAATCTGGTAAGTCTTTGAGACAATCAAACTACTTGATTGTCATTGATTTGCATTACAATGTTTT ATGTTAAATACATAGTTGTTGATGTTGTAATTTGGATTACTAGAGTGGTATCATAACCTGCCTTTCATTCTGGAATTTTT TTACACAATGCAGGGTGTTCTGTCTGCCACAGTGCTTTCTCTTGTTCCCATGATTCGTCCATTTCAATGGCAGAGTTTAC TGCTCCCGGTGAGTCAGTGGATCCAACAACACCTAGTTTCATTTTTTTCTTGTGGCATTGTCATCTAAGTCTAACGATAA GTAAGCCTTGCTTTTCAGGTTTTACCTGGGAAAATGATTGATTTTCTTGATGCCCCAGTTCCATATATTGTGAGTTTCCT TTTGACGCTTTACAAAAGATGTCATATTTGTTTTGTGGACTACTACTTTAGTTTAGTGTTTATCATTGCTTTTTGATTTA TTTGTTTCGCCGAATATTATTCATACTAGATTCATTCATAACATTCTCCTTTGCTAGGGGGAATAATTGACTTTCTAGGT TTTTGTTTTGAGCTATTTGTTTCATATGATTTGGACTGGTTTATTCTCAAAATTGATGCTTTTCATCATAGACATCCGGT TGCACTTTTGTATAGAGGTTAAAACTAGGTACTTTCAATTTCAGTGATCCCAAGTTTTTATTTTATTCAGGAATCTTTGA CACTCCTTGTTGTAGGATTAAATTCAAGTAGGGCCATTAAATTATATGGTTTTCACTCCCTATTCTTACATGTGTTTTGG AAAGAATGTGTTGCTAGCTTCTCTCTTGTATGTTGTTTTAAAGATGCGTGTCTTTCAGTTTCAATTTGAACTGATAATAC TTATGCACACATTGAGGATTAGTAATTTATTATTACTATGCAACTTTGATTTCAATATGCGAGAATGATACCCTGCTCTA CTATGTTGTGTTTATAATGCTTATGTCTTGTCTTCCTCCAGATCTTTTCTGAAATTTGAAGGGAAAAAAATGAGACAAAA ATCGGAGTGGAGAGAGAGAGAGAGAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGAAAACGGTCATGTT AGTAAACTGTTCATGCATGGATTACAACTTTGAGCTGCAATATTTTACCATCTTGGTTCTATGTTTGGTGGACATTTATT TATTTATTTTGCTGACAACACATGTTTTTAGAAATTTTAATAATGGTCTCATTGTTTATCCAATTTCCTAATATTCTTGC AGGTTGGCATACAGCATTTACCAGATGATTGGAATATGAAGACTTCCAATCTTGTTCATGTTAATGTACAGAAGAATCAG GTTTGTAATGACTTTTTAAATATAACATCAATATGGTATTCTGATGGGTACTCACGGCTAATAGCTTAGTTAACAAGTGT TAGGGGTTTGTTAGTGAGTTAAAGGGTTACTTAGAAGTTTAATAAAGCTTGTTGCCTATAAGTAAGAGGGAGTTAGTGAG GGATGGTTATCTGTGTTTTCTGCCTAATAATACATCCATATTTTATGGGTTCTATCATATTCCATGAGATTTGTGGGGAG TCTATTGGAATTTGGAAGCTTGGTACACTTTAGTTATTTTGAAATATCTTAAGCTCTCTATGTTCCAAAATTTGGGCTTG AATATACACACACACACATATATATAGACTGCATATTTGAACAAGCAAATTCTTGAACAAGCTTATTAACAAGGGGACAA CATAATGTTGAACTTTTCTTTCATATTTCTGTTCCATTTCATGCTTTTGTTTTTCTCTTTATGTAGGTTAAAATGTGTCA TTTGCCAAGACTTCCACAGTATAAAGAGCTTGTCTCTCAATTAGGACCAATTCATGCCAAACTTTCAAGGGAAAGTTCAA TTGCTCAAAAGCATCCAATACATAGGTGCAACGAAGTACAGGTTTTTTAATTCCCATACTTAAATGCTTCTCTCTCTCTC TCTCTCTCCCTCCCTCTCTCAATTTTGGGAAAAAATTATTATTTAATCTATGGATAATTCATGCATCACAAACCAGCACA GTTTTTCTGCTTCTAGCCTCTGATGCATCTTTTACCAGTGGCACTTGCTAAGTTGTACTTGACTACTTGTTTGCAGGCTG AAGCTGCAACTCAGTTTCTGAATATCATGTGGCATTATCTGGAGTCACTTTGTTCTGAACTGAAATTTCATACAATAACT AGTGTACAATCAAACAATGACAGGGTAACATAACTAAATCATTGCTTATTCTTTGTAATCCTGAAAATTCTCAAATAAAT AAGTAGTTTGTCCACCTTTTTCTAACTCACCCAGGACTATTTTTCAGGTTTCTTTACTTCTTAAAGATAGCTTCATCGAT TCCTTTCCTATTAGGGACCAACCATTCATTAAGGTAACATCATTTTCTTCTTTTAAAGAAAAATCATAGAAAATTTTCAT TTTACATGATCTTTGAAATGATTGTTACAAATACTTGCACATGTTGCCATCTTTTAAAAATAAAATCTGACTGGTGTATA TTTAACATTTCAATTAAGGGTGAAGAAAAAAAAGCATTTTCAAATAAAAAACCTTTAATTTTTGTTTTCATTTTTATGCT GAAGCAACATAGTTCCTAGTGAGACCGAGAAGCTTTTTAATGGCTTCTTTTGAAAGCTATTGATTATGATTTGAGTCATT GGTTTTGCAGCTATTTGTAGATACACAACTCTTCACTGTTTTATCAGACACTCGTCTATCAAGCTTTGAGAGTGGCGAGT CATAGTTCGTTGTCGCCTTATTTTAGGACCAAAGGGTGTTCTGTAAGACATGACTGTTGAGACTGAGGAAGATATAGTGC ATGATGTCATTGGTGTGAACCCTTTCAGTACAGATGAAATTTTGCGAATCCGAGAATCCAATGTTTGGAATGACAAATGA AGAGTTGTTATGTGGATCAAAAAATTGTACATGTTGATAGTAATTGATTGCAAATGTTGATATACTAATAGTGTGCTTGG TTCTGTTGTGGAAATCCCCATAAGCAATTCTCGGATGAAGTTACAGTGCTTTGGATTGTGCGTCACTACCAATTCAAACA CACTACTAACACTGCTGCTAACCCAAAGGAAAGAATTATTGTCCCTATTTTTTTTATTGAGGGCTATGTTCTTGGGTTTA GATGCTCATGTTTTGTAATTGACTGATTGTGAGTACTGACTAATTTCCCTCCCTCTATAGTTTAATATCATTCAGTTCTT TGTTCCCTTTGTTTTTACTATGACATTGCTGCCTATATGGTCTTTTAATTTTACTTTTATTTAAATAAGTTTTTATAGTG AGATTTGTTTTAGTCCTTACGAGCTAATTTTTATGGTTATATCTAAGTGGTTGAAATAAAAGTGAAACAATTCTAGGTGA AGTGTGAT
CDS sequence (LotjaGi1g1v0702500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACACAAAAGAAGAGGCCGAACCTAATGAGGAGAGGCCCTCGTCGCCGATGTGGGTTCTGCATCAGTTATCTGAGGG AGCATTCAGAGTTGCTGGGGAAGCATGGCAGAATATGTACTCCAGTGGTGGCGGCGGCGGTGATGGTGTTGGGTCAAGCA TGCCACAAATGGGGCCTGGTGCTCATAGACGCTGTCAAAGTGAACTTGTTACTAAAGGATTTCAACGTAGTAGTAGCTTT CAGAAGTTGAAGTGTCACGTGCAAAAGGCCTGGCGGTGGAGTGGCAGATCCCGCGATGAAAATTCCCTGCCAAATTTTAA TCCTGAGGTCATGGCAAATCAGAAACGTCAGTGGTATCAGCTTCATCCCAAATCTATGGATTCTGTAAATTATAAGGAGC CAACCTCGCTGTTTGAACATTTTGTGATTGTGGGGCTGCATCCAGATGCTAATTTGGAAGTCGTGGAGGATGCATTTGCA AGAAGGAAGAAGTGGGAAAAGGAAAGATGTGAATTTCCAGATTTGAAAATGTTGCAGCAACAGAAGCCAGCAGAACCAAC TTTGGAACCTCAGATTTTGTTCAAATATCCACCTACAAAGAGGCTAACAGTGCGTATGAAGGATTTAGCCTCCTTTTGCT TTCCTGAAGGTGTTAAGGCATGGTTGCTGGAGAGGACTCCATCTTTCAGTGAACTAAACGAACTTGTCTATGGACAGGAG CATTTAGGAAGAGACGATCTATCATTTGTCTTCACACTCAAGGCAGTAGACAATACAACACTTTATGGAGTTTGCTTACA TGTTCCTGAAATAGTTCAGAGGCCCCCTGGTATCTTAGGCATATCATCTCCTCATTCTCTGGTTTCCAGCCGTTTTATGG TTTCTGCACCTCGATGTTACTGTCTTCTAACTAGAGTTCCCTTCTTCGAGTTACACTTTGAGATGTTAAATAGTCTTATT GCACAGGAGCGTTTGAATCGGATAACTGAGTTTATAAATGAGATTTCTCTCACTAGTTGCCTTCCACCATCACCCAAACT GGATGATCAAATGAGTTCAAATGCTAACTCCCCAGATAGGCAGTCATTTAGTGACTGGATGTCTTGTGCAATTCCTCTTG ATGGTGCAGCAGTCATTACTGCCGCTGCTGCTGGGCTTCTATCTGATGATGAAATCACACAGTTATCACCCAAAATATGG GATTCTCACTGTCAATCTCCTGCAAGTGTGGCTGCCAGCGATGCTTCTGATTTCTATCAGTTTAGAGACACAGATAAGGA TGGCAGAAATAATCTGCAGGATCATAGTAATGATGATTTTGAGGCGCCAGAAATTCAGGAGACTATGGAAAGAGTGCATG GAAATTGTGAAGGTGGCCCAGTTTCTCCCATTGTTGGAACACCTCAATCTTCTAGGAGTCGTGTCTTGGAGCGTCTTGCA AGTTCTGAGTCTCTTTTCAGTCCAGTTAGAAGCATGGTATCTGAAGATGAGGATGATCCTTTTTCAAACAACGAAAGAGA TTACGGAGATGATTACTTAATGGAATGGGCTATGGAGAATAAGAATGATTTGCTACAGATAGTGTGTCGATATCATGCTC AACCTATTCCACCTCGAGGGAGTGAGTTTGTTTTTCACCCTCTTGAACATCTACAAGCTATTCAGTATATACGACATTCT GTTGCTGCTCTTGGCTTTGAAGAAAATTGTTTTAATTGCTCTGAATCGGCTCAGGTCAATTCGAAGTTGGCAGCTGCTGA GGAAACCCTTGCATTATCAGTATGGACGACCGCAACTACGTGTCGAGTTCTGTCCCTTGATAGTGTGCTGGCATTAGTTA CAGGAGTTTTGTTGGAGAAACAGGTGGTAATAGTGTGCCCAAATCTGGGTGTTCTGTCTGCCACAGTGCTTTCTCTTGTT CCCATGATTCGTCCATTTCAATGGCAGAGTTTACTGCTCCCGGTTTTACCTGGGAAAATGATTGATTTTCTTGATGCCCC AGTTCCATATATTGTTGGCATACAGCATTTACCAGATGATTGGAATATGAAGACTTCCAATCTTGTTCATGTTAATGTAC AGAAGAATCAGGTTAAAATGTGTCATTTGCCAAGACTTCCACAGTATAAAGAGCTTGTCTCTCAATTAGGACCAATTCAT GCCAAACTTTCAAGGGAAAGTTCAATTGCTCAAAAGCATCCAATACATAGGTGCAACGAAGTACAGGCTGAAGCTGCAAC TCAGTTTCTGAATATCATGTGGCATTATCTGGAGTCACTTTGTTCTGAACTGAAATTTCATACAATAACTAGTGTACAAT CAAACAATGACAGGGTTTCTTTACTTCTTAAAGATAGCTTCATCGATTCCTTTCCTATTAGGGACCAACCATTCATTAAG CTATTTGTAGATACACAACTCTTCACTGTTTTATCAGACACTCGTCTATCAAGCTTTGAGAGTGGCGAGTCATAG
Protein sequence (LotjaGi1g1v0702500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDTKEEAEPNEERPSSPMWVLHQLSEGAFRVAGEAWQNMYSSGGGGGDGVGSSMPQMGPGAHRRCQSELVTKGFQRSSSF QKLKCHVQKAWRWSGRSRDENSLPNFNPEVMANQKRQWYQLHPKSMDSVNYKEPTSLFEHFVIVGLHPDANLEVVEDAFA RRKKWEKERCEFPDLKMLQQQKPAEPTLEPQILFKYPPTKRLTVRMKDLASFCFPEGVKAWLLERTPSFSELNELVYGQE HLGRDDLSFVFTLKAVDNTTLYGVCLHVPEIVQRPPGILGISSPHSLVSSRFMVSAPRCYCLLTRVPFFELHFEMLNSLI AQERLNRITEFINEISLTSCLPPSPKLDDQMSSNANSPDRQSFSDWMSCAIPLDGAAVITAAAAGLLSDDEITQLSPKIW DSHCQSPASVAASDASDFYQFRDTDKDGRNNLQDHSNDDFEAPEIQETMERVHGNCEGGPVSPIVGTPQSSRSRVLERLA SSESLFSPVRSMVSEDEDDPFSNNERDYGDDYLMEWAMENKNDLLQIVCRYHAQPIPPRGSEFVFHPLEHLQAIQYIRHS VAALGFEENCFNCSESAQVNSKLAAAEETLALSVWTTATTCRVLSLDSVLALVTGVLLEKQVVIVCPNLGVLSATVLSLV PMIRPFQWQSLLLPVLPGKMIDFLDAPVPYIVGIQHLPDDWNMKTSNLVHVNVQKNQVKMCHLPRLPQYKELVSQLGPIH AKLSRESSIAQKHPIHRCNEVQAEAATQFLNIMWHYLESLCSELKFHTITSVQSNNDRVSLLLKDSFIDSFPIRDQPFIK LFVDTQLFTVLSDTRLSSFESGES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 75 | 820 | 746 | 4.6E-215 | – | |
PANTHER | 75 | 820 | 746 | 4.6E-215 | – | |
SMART | 134 | 269 | 136 | 1.9E-5 | ||
ProSiteProfiles | 172 | 822 | 651 | 19.931 | ||
Gene3D | 175 | 344 | 170 | 1.5E-7 | – | |
Pfam | 190 | 267 | 78 | 6.5E-10 | ||
SMART | 295 | 696 | 402 | 3.8E-35 | ||
Gene3D | 594 | 747 | 154 | 6.8E-31 | ||
Pfam | 597 | 695 | 99 | 8.8E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0702500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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