Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0709600 |
| Transcript ID | LotjaGi1g1v0709600.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein root UVB sensitive 6; TAIR: AT2G31190.1 root UVB sensitive protein (Protein of unknown function, DUF647); Swiss-Prot: sp|Q9SJX7|RUS2_ARATH Protein root UVB sensitive 2, chloroplastic; TrEMBL-Plants: tr|I3SPU8|I3SPU8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0709600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:127779184..127781973) extracted from Lotus japonicus Gifu genome v1.2.
AGGCCTATGGAGGCACCAATGAGAAGGGTGGATAACATGGTTTTTAGTCCTGTGAAGAGAGGTAGAGGGAGACAAAAAAG AACATGGGAAGATATTGTTAAGGATGATCTTATTATCAATAACATCCCTCATAATTTATGTTTTGATTGAGCTCAATGAG GTAGTGTGATCCATATAGCCGACCTCACTTAGTGGGATAAGGCTTTTGTAGTAATTGTTGTTATATGTTTAGCTAAACCT TTTCTCTCGTCACCCTGAGTGTTTTTGGTTTCTTTGTAGGTAATGCTCGTTGATGATTCCAGGCCATTATACCAAAAGGT GGCTGGGTCTTTCATGAATAAATTTTTTCCATCAGGATATCCATACAGGTCGTTTGATTTTTCTTGAATATGGTTATGGC TTAGACAGGCCTGTTCTGCGGGCTCAGTTTTTACGTGTTTCCTTTGCAGTGTAAATGAAGGCTATCTCAGATACACTCAG TTTCGATCTGTTCAACATGTTACCAGTGCAGCACTATCAGTTCTATCAACTCAGGTCTTCTGATTACTTGAAAATCTCAT TTAAGCAATTAATCAGAAACACGTTATTGTCTTTGAAAATGAATACTTACTGGCATGGCAAGTGGCAACTGAGATATAAA TTTCTCTTAACTCATGATTGGTTCATTCCTTAAACATTATATTATATGGTGAAGTCCATGTGCATGATACATATTTTGTT AACCATAGGGATGTAATCTTTTTCTGAAGTAATTAAGTGTGTGTCCTTGATCTGTATGCTTATTCTTCTGCAGTCATTGC TATTTGCTGCAGGGTTGCGGCCCACTCCTGCACAAGCAACTGCTGTTAGCTGGGTAATTAGATACCATTTTAAAATTGAC AATTTCTCGGACCAGTAATAGTAACTTCTTTTTAATGTATAACCCGTTTGTCCTGCTTACATCCATAGATTTTAAAGGAT GGAATGCAACATGTAGGGAAGCTAATATGTAGCAATTGGGGTGCAAGAATGGATTCTGAACCTAAACGTTGGAGACTAAT AGGTTTGCATTTGGGCTGGGGCTTTTCTATTACCAATTTCCCCTTATATTAGCTCTTACCTCTTATTTTCAAAGTTCTCA AGTTGTCTGACTGGAATTAGCTTTACATTTGCAGCTGATGTGCTCTATGATTTAGGCACGGGCTTGGAAGTGCTTTCTCC ATTATGTCCACATCTTTTTCTTCAAATGGCAGGCCTAGGAAATTTTGCAAAGGTTTAGATTTTTATTGGGTTTTTGTAAA AAACAATTTCACATTATAGCATATGTTGCGACATAAAGTTGTCTCAGTGCTAATTGTTCGTTAAAGCTCATGGCCATTGG TTTTAGTATCCTGATTTAGATATCTGGTAAATGCATCATATTTTATGGTCTATTAACTTCTCTCTGTTATTTGGGAATCA ACAGGGGATGGCAGTTGTTGCAGCAAGGGCAACAAGATTGCCTATATATTCTTCATTTGCTAAAGAAGGAAATCTCAGTG ACCTGTTTGCGAAGGGGGAGGCTTTTTCAACACTCTGTAACGTTATTGGGATTGGAGTTGGAATTCAGCTAGCATCTACT ATCTGTGCATCAGTGCAGGGAAAGGTATAGAGACCTTATTTGTTTACTCTTGAGCTTTAGTGTTCAATTTGATCTTCAGC TTTTACTTTTACAATTAGTTTGTGCCAACAATATATGCAATGTTGTTCTTGGTTGTGCAAGAGAGTCTGTGTCGGGGAAG ATAGCGAGGGGAGGGGGGTTAAATTTTTTTGTTAGAGTTGGTGGCTTAGGCCAGGGAGGACAAGGTCTGTCTATTTATTC AGCTCTGATTGGTTACTTTATGTTCATTCTTTTTGGGTTCTATTATATTTTGAATACAATTTCATTGCCTTTCATATATT ATTTAATGATGGAGTTATAGAACTTTTTCGTCCGGTTGCTGTCGGTCCTCTTTTCTTTCAATCATTGATCGTGGAAATTT TGTTTCTTGTAATCAGAAATGTTACTAACAAACTAAAAAAGGAAGGACAAAGTAAGTTAATCGTGTTGCATATCTTAATG GTAAAATACACATTGTGTTGAGGATTCCAACTGATGGATTATGAAACATTTTGTTGTCAGATGGTTGTAGGTCCTCTCCT TTCAATTTTACATATATACAGTGTGTCTGAAGAAATGAGAGCAACACCTATCAATACCTTGAATCCACGAAGAACTGCAA TGATCGTGACAGATTTTCTCAAGGTCTGGTTTTTACCATTGTAGTAAATGAAATCACTCATGGTTTCCTTCCTTTATTTG AACATGTGAAATGCTGTTTTAATGTTAATTGTATTCGAAAGCAGGCAGGAGTTGTCTCAAGCCCTGCTGATCTAAGATAT AGAGAGGATCTGCTGTTTCGTGTCCGACTCACAGAAGATGCTGGAAATGTAAGAGTGGGGAGGGCTTTGCATGAGGTTAT TAAGCCTTCCAGGCTTCTTGAATTAGAACAGGTACTTCCAGGGGAGAAGTTTCTCTTAAATCGTGGGGGTAAATGCGTCG ACATGGTGTTGGAACAAGATGCTAGTGGTGAAGATGCATTGAGAGGGTGGCTAGTTGCTGCATATGCTGCACAAATTGAG AATTCCTCTCATGAGCTCAGTGCTAGTGTCCTGCATGAGGCTTACAAGAAAATGACCGGTGTGTTTCCTGTATTTTTAAA AGAATTACAGAGCAAAGGGTGGCACACTGATCGTTTTCTGGATGGAACTGGGAGCCGCTTTGCATTCTAG
CDS sequence (LotjaGi1g1v0709600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGCACCAATGAGAAGGGTGGATAACATGGTTTTTAGTCCTGTGAAGAGAGGTAGAGGGAGACAAAAAAGAACATG GGAAGATATTGTAATGCTCGTTGATGATTCCAGGCCATTATACCAAAAGGTGGCTGGGTCTTTCATGAATAAATTTTTTC CATCAGGATATCCATACAGTGTAAATGAAGGCTATCTCAGATACACTCAGTTTCGATCTGTTCAACATGTTACCAGTGCA GCACTATCAGTTCTATCAACTCAGTCATTGCTATTTGCTGCAGGGTTGCGGCCCACTCCTGCACAAGCAACTGCTGTTAG CTGGATTTTAAAGGATGGAATGCAACATGTAGGGAAGCTAATATGTAGCAATTGGGGTGCAAGAATGGATTCTGAACCTA AACGTTGGAGACTAATAGCTGATGTGCTCTATGATTTAGGCACGGGCTTGGAAGTGCTTTCTCCATTATGTCCACATCTT TTTCTTCAAATGGCAGGCCTAGGAAATTTTGCAAAGGGGATGGCAGTTGTTGCAGCAAGGGCAACAAGATTGCCTATATA TTCTTCATTTGCTAAAGAAGGAAATCTCAGTGACCTGTTTGCGAAGGGGGAGGCTTTTTCAACACTCTGTAACGTTATTG GGATTGGAGTTGGAATTCAGCTAGCATCTACTATCTGTGCATCAGTGCAGGGAAAGATGGTTGTAGGTCCTCTCCTTTCA ATTTTACATATATACAGTGTGTCTGAAGAAATGAGAGCAACACCTATCAATACCTTGAATCCACGAAGAACTGCAATGAT CGTGACAGATTTTCTCAAGGCAGGAGTTGTCTCAAGCCCTGCTGATCTAAGATATAGAGAGGATCTGCTGTTTCGTGTCC GACTCACAGAAGATGCTGGAAATGTAAGAGTGGGGAGGGCTTTGCATGAGGTTATTAAGCCTTCCAGGCTTCTTGAATTA GAACAGGTACTTCCAGGGGAGAAGTTTCTCTTAAATCGTGGGGGTAAATGCGTCGACATGGTGTTGGAACAAGATGCTAG TGGTGAAGATGCATTGAGAGGGTGGCTAGTTGCTGCATATGCTGCACAAATTGAGAATTCCTCTCATGAGCTCAGTGCTA GTGTCCTGCATGAGGCTTACAAGAAAATGACCGGTGTGTTTCCTGTATTTTTAAAAGAATTACAGAGCAAAGGGTGGCAC ACTGATCGTTTTCTGGATGGAACTGGGAGCCGCTTTGCATTCTAG
Protein sequence (LotjaGi1g1v0709600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAPMRRVDNMVFSPVKRGRGRQKRTWEDIVMLVDDSRPLYQKVAGSFMNKFFPSGYPYSVNEGYLRYTQFRSVQHVTSA ALSVLSTQSLLFAAGLRPTPAQATAVSWILKDGMQHVGKLICSNWGARMDSEPKRWRLIADVLYDLGTGLEVLSPLCPHL FLQMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAFSTLCNVIGIGVGIQLASTICASVQGKMVVGPLLS ILHIYSVSEEMRATPINTLNPRRTAMIVTDFLKAGVVSSPADLRYREDLLFRVRLTEDAGNVRVGRALHEVIKPSRLLEL EQVLPGEKFLLNRGGKCVDMVLEQDASGEDALRGWLVAAYAAQIENSSHELSASVLHEAYKKMTGVFPVFLKELQSKGWH TDRFLDGTGSRFAF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 31 | 414 | 384 | 9.0E-227 | – | |
| PANTHER | 31 | 414 | 384 | 9.0E-227 | ||
| Pfam | 43 | 274 | 232 | 5.8E-64 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0709600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…