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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0712400 |
| Transcript ID | LotjaGi1g1v0712400.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | p-loop containing nucleoside triphosphate hydrolases superfamily protein; TAIR: AT2G30630.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|B6V866|MCPB_TRITO Carboxypeptidase 2; TrEMBL-Plants: tr|A0A072UDK0|A0A072UDK0_MEDTR p-loop nucleoside triphosphate hydrolase superfamily protein; Found in the gene: LotjaGi1g1v0712400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:128034618..128038026) extracted from Lotus japonicus Gifu genome v1.2.
ATGGACGGCACACTCTCCTGGGTACCATTTGTTGTGCAGACAATAACAATGGCTAGAAATGTCCACCGCCGCCGCTACCG CATGGGAGTTGGTTACAGGGTAAATGATGATGGAAGTGTGACTGAAAGCTATTGGGAACGAGTTGAAGATGAAGAACCTG AACAGGTTGGAGGCAAAAAGAGAAAACCATATAGGATAGAGCTGGTTGGAGTAGTGTGTGATGCTTACCTTGCAGTAGTT AGAGGCATAAGGTCATCTTGAATTTTTTCCATTTGACAATCTTACATACTCACCAATCACATGTGTTCCAATGAAAATGG ACTCCACTTATTAATGACTAAATTGAATGTGAACAGGAGAGCTATTATGTCAAGAAGAGGAGTGAGAGTAAAGTCACAAT TGAAATCCCACAAGAGATTTGCTCAGGCTTTTATGACTTACTGTAACCTTGTAGACAATGCCCGACTATACTGCACAAAT GCGTTAGAAGGCCCAGCCAAGGTACAGATTTCCCTCTTTCTACCTTATTCTTTTTCAAATGGCAAAAACGTGACACTATA CATATTTTCTACAGATATAAAATAAAAATTTGTACGTGATATTGAGATAGTTCTGCAGAATTATGCAGAATAAACAAGAT ACAGTATAATAGTGTTTTATTCAAAATCTGAAATAGCATATGAATTCCAAACTATAGAACTAAATTTGGCCAAAGAGAAG GATAAAGACAGAGAACTAGAGAAGGGATCACAAAACTTCCACGCCCTCTATACATCACTCTTTTAAGTCATTTGCCTTCA ACTTCCATGTTTTCTTCCCCACACGAGAACTATGCTTAACTGCCGCTGCCTTATTATTCGGATTGATTGCCACGGCCCAT GCGTCATTGCTCTTGGTGTAATTCTGTTATCTTTGTTGCGTCCATATCAATGCCCCCACGATGAAAATTGACCTTATCCC CAAGGTCAACGGAAGGAAACTGATTTTGCAGATAATACATTGTCCCAAATACTTCCACAAGAGGCAAGTCAGACCACTTA ACTCTAACGAGAATCTATAACTTGATCAGGCAGATGTTGAGGACCATCCTCCGATGTAAGGAAAGGAGAGGGAAGCTACT GCCGGTTGGACATACCTACACATTTCCTAAGTAAAGAAATATGGAAAACAGGATGTATGCGCACGCAGAGGGATGCAAAA GCAACTTGTAAGCCACAGAACCAATGCGTTCCTCTACTGGAAAAGGGACAAAGTAACGCATGCCCAACTGCATATTAGAA TACGAGCACAAGGTAAATTGCCTATACAGTTTTAGCTTACCAAACACCTCCAATCTGAAACTGGGGATCCAATCTTTTCC TATTAGTCATTTGTTTCATGCGGTTGTGAGCTCTGGCTAGGTTGGTCTAAAGAGTGAACAGAACCTGATCACGCTGAGCG CTGAGGTAACAGTTGGTCCACATCTGCTGAAACAGCATCAGAAGAAATCAAAGCAATGGTGGACCAGCTTGGCCATAAAC TATCTGAAAAGGAGTCATGCCCGCAAAGGAGTGATAAGCAGTATTATACTACCTGCAGAGGAGTGATATGCAGTATTATA CCAAAATTCAGCCCATGGTAAGAAACTTAGCCAATTACGGGGTGGTCATAAACAAAACAGTAAAGAAACATCTCAATGCA ATTATTAAGAACTTCAGATTGACCATCTGTTTGCTGGTAGGCAGTACTCACTACTCATAGCTAAAGTTGTCCCTTGCAAC TTGAGTATTGCTACCAAAATTGATTGGTAGATGCTGCCCTGTCCAAGACAACTAACTTTGGCATGTCATGGGCATGCAGT TTCACCACATGCTGAACAAACTCTTCAGCAACTACAGTGCTATTAAAATCGGTCTTAAGGGGAACCAAATGAGCATACTT AGATAAATGATTGATAACCACCATAACTTCAGTATGACCTAGCACCGAAGGGAGGCCATCAGGCCAATGATGAATACTGC TTACTCATGCTGAACCTACTACCACATAATAATAATCTTGTTCCAAAATTGAAATATAATATATAAAATTATGATATAAA CTTAAAAAGGTTTGGCTCCTGTAAAATGAAGAGTACAATATAAAGAGTAGCATGCAAAATTATGATTATTGATAGGAAAG TAAAAGCTTGAGATCATAATCAAGTATATGCACATGTACTATCCTAGGTTCACAATCCCGGCGAGATCCTCCGAGATCCC AGTTTTCCCATTCCATCTCGGCCAATTACTGGGACGACCACCATCGTCCCATCCCACTTTGATGTCCCGGCTAGCTCGGC CCATTTCCCAGCATTTCCCGCGCTGTCCCGGCAGGATAAGGGTCCAACATTTTCAAAAATGAACTCCAATTTTAAACGTC GGGGGAGTTTTTTAGGGGCATTTCCAGGTTTTCACGACCAAAAAAACCCTAGATGGGAGGAAGAGTTGGAACTTTCACTT CCCATGCTCTCTTCACCCTTGTTCTCTCAATACCTATGACTTCTATTGCTAGTTTGCTACTACCAAAGTATGAATATGTT ATGAATTTCAAGTAAAATTTCTCATTAATTTAGTGTATATATATGGTATAAATTATACCAAATATAGATAAAAATTCAAT ATCTCTGACCATCCCGCTATCCGGTACACCATTTTTGGGGTCAGCCGCTACATGCCGAGATCTGGGATTGACAACATAGA TACTATCTATGAAGTTGTCAAAATCTTGTTAACTTTTCAATAAACAATACTTTACTCTCTAAATTGCACCCATCACTTAA GAGAAGTCATATCTTACCAAAAAAAAATCCTAAATAACAATTAAATATTTCAAAAACTTGGATCATGTTACCTAAATCAA GTTAAAACCATAATGAATTATAAAACTAAGTAACTTAGTCATGCTACCAAAAAACTAATTAAATCTGCATGATATATAAA ACTAGGATCCCACCATTACCTTTCAGCAATTTACCATAATGAAAGGAACTCGATGCAACATAATGTAAAAAATAAGATAT TTATATTACTAATGTCAATGCAGTAATCATTTCATTAATGTTGTCTTTATCATGGCTAGTATTTTGTTGTATATTCAACA TCTACTACTGACATTATGATTGTTGTGAAGTTGATAGGATGGAAAGAGAGAGACAGGACACTGCTCGTTGATCCAGATGA AATTGCCTGTTTGAAGAGGGTTGCAAAGTTGAATGACGACGCCAATTCCATTTATGAACTTTACAAGCACCCAAATCCAG CTTATGAAGTTGGATCAGTATGGAAAGACATTGTATTATCTCCTTCAAGGTTAAATATCCAACAGGAGCTCAAGTTTTCA ATCCAAAAAATTGAGAGCTCGAAATGAGAAATCTACGGAGCACAGATAA
CDS sequence (LotjaGi1g1v0712400.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGGCACACTCTCCTGGGTACCATTTGTTGTGCAGACAATAACAATGGCTAGAAATGTCCACCGCCGCCGCTACCG CATGGGAGTTGGTTACAGGGTAAATGATGATGGAAGTGTGACTGAAAGCTATTGGGAACGAGTTGAAGATGAAGAACCTG AACAGGTTGGAGGCAAAAAGAGAAAACCATATAGGATAGAGCTGGTTGGAGTAGTGTGTGATGCTTACCTTGCAGTAGTT AGAGGCATAAGGAGAGCTATTATGTCAAGAAGAGGAGTGAGAGTAAAGTCACAATTGAAATCCCACAAGAGATTTGCTCA GGCTTTTATGACTTACTGTAACCTTGTAGACAATGCCCGACTATACTGCACAAATGCGTTAGAAGGCCCAGCCAAGTTGA TAGGATGGAAAGAGAGAGACAGGACACTGCTCGTTGATCCAGATGAAATTGCCTGTTTGAAGAGGGTTGCAAAGTTGAAT GACGACGCCAATTCCATTTATGAACTTTACAAGCACCCAAATCCAGCTTATGAAGTTGGATCAGTATGGAAAGACATTGT ATTATCTCCTTCAAGGTTAAATATCCAACAGGAGCTCAAGTTTTCAATCCAAAAAATTGAGAGCTCGAAATGA
Protein sequence (LotjaGi1g1v0712400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDGTLSWVPFVVQTITMARNVHRRRYRMGVGYRVNDDGSVTESYWERVEDEEPEQVGGKKRKPYRIELVGVVCDAYLAVV RGIRRAIMSRRGVRVKSQLKSHKRFAQAFMTYCNLVDNARLYCTNALEGPAKLIGWKERDRTLLVDPDEIACLKRVAKLN DDANSIYELYKHPNPAYEVGSVWKDIVLSPSRLNIQQELKFSIQKIESSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 210 | 210 | 1.0E-134 | – | |
| PANTHER | 1 | 210 | 210 | 1.0E-134 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0712400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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