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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0761900 |
| Transcript ID | LotjaGi1g1v0761900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dehydration-induced 19-like protein; TAIR: AT3G05700.1 Drought-responsive family protein; Swiss-Prot: sp|Q5W794|DI192_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 2; TrEMBL-Plants: tr|C6T3G5|C6T3G5_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0761900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:133467701..133471823) extracted from Lotus japonicus Gifu genome v1.2.
TCCGAATTGGAAAGTCCTCGGTATTTTCCGAGTAAACACTGTATTATATATCTTCCACTTCCACCACAACCACCCACACG AACAACAACAACGATTCCTGAATCAACAACTCTACTCCTCTGCAATTCAATCAACAACGATTTTCATTGTCTTGTTCCAG AAAAAACATCTCAGTTCTTTGCATATGTCAATGGAAGGCGAGGATTTGAGCTTTGGTCTCTCCACTGCTTCTAGAACCCA CCGATCGAGGCTAAAGTCACACTTTGGTGATTCCCTGTTTCAAACATCATTCTATTCCTTCATTTTCTATTTGGGTATCT GGTTTTGTTCTCAAAGTTTAATATTTTTGTTTGTTTGGCGTTGAAGCAGAGCTCTTTGTTGATTTTGAGGAGGATGAGGT AATTGGGGATGATGATGACGATGATGATGAGTTAAGGACGGCTTATCCATGCCCGTTTTGTGAAGAGGATTTTGATCTTC TAGAGCTATGTTGCCATATTGACTTGGACCATCAAATAGAAGCCAAGTCTGGGGTATACTATTTATTGCTTTAATTCCTC AACTTTTCATTTTTACTTTTAGCTTTTATTGTTAGTACATCAATATTTTCTGTACCTTTGCCCTTGCTTTTAGTAATCTA TCCAAGTAGGTAATTTTCATAGATAACCATAACTCAGCTCCATCATAAGCCTTTTAATTTTGCAATTATGTCAATAAGAG AGACTTGTTTTGCTGCTTGGTCAGGAAAGTTCCTTAGTAGTTATTAACTTTGTAATTGTCTAATTGATTTGTTGCTTTTG TGTTCCCTCTTAGACCAAAATGTCTGAACTCATAAGCATAAGTTTAACTTATATCAGTAAATTCACAAAGAAACAGATGA TTGTGATTGCATTTGAGATATTATAATGGATCCAACAAATACAAGTTATTTTGGGGGAAATAACTTGTCAATCATATTAA GATTGTAATTTGAGTCCATTTTCTTCTTTGTCATCATTGGAGACAATAGACATCAAATAGTCACTGTTAAAATCGATTGA GATGGCTTTTCTTTCGAAGTGGGCTCTGTTCAATTGTGCATCTATGGCATCTGAAATATTGATTTTTTGTTTTGTTTATG ATTATTGGCTTGATTATACTGACTTGAGGTTGACCACTATGTAGTGTTGTAAAGTTAAACCATGTCAGGGTTTTCTTATT GGATTTTTTATATATATTGCATGTATGCAGAAGCCCTTAAAGGTGTGGTTCCTGACAAGATCTTAGCTTGTAGTACCTGA AGGGGTTACTCCAATATGAATCTAATTAGTTTCCATGTAAAGTTGATGTTGTTACTTTTTTATCTACCAAATTCTTATAT GATTAGGCCAAGATTAACACACCAATTGAACTTTAGGGAGATTGCAAGTAACCAATAACTTTCAAATCCATCATGGACCA AAAAGTAACTAAAATATCAATTAAACCCTCAAACTATGAGGAATGTAGCAATGGGTTGTTACTCCAGATTCCAGAGTTCC AGTTCTGTTACAATATCTGTTTATCATGTGATCCCTAATTTTCTTTAGTATTTCATACTTAAAAATATCAAAATGTTTAA CTGAAATACTTCCTTAAATGTTCATTTGATGTGGATAGTGAAAGGTGATACAAATGTATTAAACAGTCACTGCGTGGTTA TCACATAATTTGCAAGAATTTGTTACAAAGGGGAAGAGAATAATCTATTGTGATAATTTTTTTCCCAATTTGAGGGTTCA ATTGGCGGATTTAGAAGTTCCTGATGGCTACTTGCAATAGTCCCAAAATTCAGAAGTGTGTATAACTTTTCTTATACAAT TGATGTATTTCTCTATTGACTTGTCTTTTGTACTACATTTTGTGCTTGTTGAATAACACTCAGTTATGTCCATCTTTGTA GGTGCAGCTTTGTCCTGTTTGTGCCGTGTGGATAGGGGCAAATATGGTTGAGCACATAGCAGCACAACATGGAAACATAT TTAAGATATCCTTTCTGATCTACCTGATAGAAATGCTACTATTTATTCAAAATAATACTATTAATTGCTGTTTCTTCTGT TTTCTTTTACCAAAGTCTTCTACTTCTTATGCTTCTTATTATTGTTGTTTTTTTGTCCTTCATTCAACTTTGTACTTCCT TGACGGGAGATTACAGTCAACTCAAATCAAAACGCCACCAGCATGATTCCTACCCAACTCTTTCCTTTTCAAGAAAGGAT GAAGAGGATAGACACTGGGAATCTTTTTATGCTGGGTCATCTCCTGTGACGTCTACCTCCGAGACAGCGCGTGATCCATT GCTATCATTTTTATGTGGTGCAGCTGCTGCTGGTGAACACCAAAATGTGCAGCCTGATTCTTCAAGTGAATTAAGCATTG AAGAAACACATTCAGATGATACAGTGTTAGAAAGGTATGAAGTATCACTCTGTCTTTTTTTTGTCTTTGACTCGATATCC ACTCCACACACATGTAGCTGTTCCTGTGGGACTAGTCTCCAGGTCTCCCCAAAGCGGTGATTCTAATATTTGAACCCCCC CCCCTGCCCCCCACATTGCCGGTAAAGTTTGACAGTGGTCACCAAATGATTACCACCACTACCAACCATAAACTGATGTT TCTTAAACACCCCATTTCTAATGAGAAAAGAATAAAAGAGAAAGAAGTGAGACATGTGATGAGAAAATAAGAGATATATA GAAAGAAAAAATGTGAAATTGGGATGGAAAAGAAAGTGAGTATGAATATATTGAAGTTCTATCACTATACCACATTCCTC ATGTATTATCAAAACATCAACTAGTAAATCATAAATTTCTTCAGCAAGTTGCTTGATCCATAGTTGTATAGTTTGTGGAA GGTAAATAGTCAATATTCAGAGCAGTAAATTATTATTACTAACTAGATGATTGATAGTGCCAAAAACTTGACTTTCTGAG ACCACCCTTTTACTTTTGAAGCAGCAACCTAAAAATATTCAAAACAGACACCTCGCCTGAAATCAATAGAGGCATCCCTC TATTGCAGTAGGTTTTGATTGCTTTTTTAGTAATTTTCAGAATTCTTAGTGCATTTAACTCTAGCTTTCACTGTAGTTAT GTTAATATAGTAATAATGAGGCAAATGTACTCTTGTTCTAGACCTGAGCTTCATCTGATATTGAGTCAATGATTTTTTGA GCCAAAAACCTGGCTGTATATGCAAATAACAGGGTTCTTGAGTTCTCTTGTTTCTTTCTTGTATTTGTTTTTTGGTTAAA ATCTTAGAGACTTAGAGTACCATTTTGGTTATTTGTGCCCTGTAACATGTCATTCATCAACTTCCTATTGACTTGCTCTT CCGTTTAACATTGTATTCTTTGTTAAGAATAAGATTTTTAGCTTAGGTGACTTTTTATATATCCCTCTTAGATATGTAAC ATAATATTTCTATTACTGCAGAGATGTTGAGCCATCTTTACCCGACAAAGACCGCATAGAGAAAGCTCGGCGTAGTAAAT TTGTACAGGGACTTTTGATGTCCACTTTCCTTGATCCTGACTTGTGATCGAGACAATCAGGAACATCAGTGGTTAATATC AATTCGATGGAGGAAATAAAAGGAGAAAGTAGAGTTAGTTTCAATCTTGAAAATTATTCATAGTCACAGGCCAGTATTTG TGTTTGTATGAATTGTAATGTGGTATATCTAGTTTAGAGAGCTCAAATACATGTAGGAATCAAATGTAATGAGTGTTCAA GGCAATGCAGTTATTAGTTCAGAACAATTGCATATCCTCTTCTATTCCCCCTCTCAGGACTTCATCCATTAGTTTTTGTA GTTCACTCCATATTCCTTTAGCATGTATTAACTAATTTTTCCTCAGAATTAATTCTGGTACTCAGATTTTACTCATAGAA GCTGATGGTTCCCTTATAATTGATTTTGACTTCTAAATCAATTGTAAAATAGTTTCAAACATGTTATTATGGGTTATATC TGAGATTACAAGATTAAAATGCGCTTATGTCATGCACTTATGACCAACAGAGGTGTAGCATGCAAATTATTATTTTTCTG GCTTTCTCAGAAAAATAAGATGTTCCGTTTATTCCAGTACGAA
CDS sequence (LotjaGi1g1v0761900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAATGGAAGGCGAGGATTTGAGCTTTGGTCTCTCCACTGCTTCTAGAACCCACCGATCGAGGCTAAAGTCACACTT TGAGCTCTTTGTTGATTTTGAGGAGGATGAGGTAATTGGGGATGATGATGACGATGATGATGAGTTAAGGACGGCTTATC CATGCCCGTTTTGTGAAGAGGATTTTGATCTTCTAGAGCTATGTTGCCATATTGACTTGGACCATCAAATAGAAGCCAAG TCTGGGGTGCAGCTTTGTCCTGTTTGTGCCGTGTGGATAGGGGCAAATATGGTTGAGCACATAGCAGCACAACATGGAAA CATATTTAAGAGTCAACTCAAATCAAAACGCCACCAGCATGATTCCTACCCAACTCTTTCCTTTTCAAGAAAGGATGAAG AGGATAGACACTGGGAATCTTTTTATGCTGGGTCATCTCCTGTGACGTCTACCTCCGAGACAGCGCGTGATCCATTGCTA TCATTTTTATGTGGTGCAGCTGCTGCTGGTGAACACCAAAATGTGCAGCCTGATTCTTCAAGTGAATTAAGCATTGAAGA AACACATTCAGATGATACAGTGTTAGAAAGAGATGTTGAGCCATCTTTACCCGACAAAGACCGCATAGAGAAAGCTCGGC GTAGTAAATTTGTACAGGGACTTTTGATGTCCACTTTCCTTGATCCTGACTTGTGA
Protein sequence (LotjaGi1g1v0761900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSMEGEDLSFGLSTASRTHRSRLKSHFELFVDFEEDEVIGDDDDDDDELRTAYPCPFCEEDFDLLELCCHIDLDHQIEAK SGVQLCPVCAVWIGANMVEHIAAQHGNIFKSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLL SFLCGAAAAGEHQNVQPDSSSELSIEETHSDDTVLERDVEPSLPDKDRIEKARRSKFVQGLLMSTFLDPDL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 230 | 228 | 1.2E-87 | – | |
| PANTHER | 3 | 230 | 228 | 1.2E-87 | ||
| Pfam | 52 | 106 | 55 | 1.5E-15 | ||
| Pfam | 126 | 225 | 100 | 1.8E-25 | ||
| MobiDBLite | 173 | 207 | 35 | - | – | |
| MobiDBLite | 184 | 207 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0761900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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