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LotjaGi1g1v0763100.4

Overview

Field Value
Gene ID LotjaGi1g1v0763100
Transcript ID LotjaGi1g1v0763100.4
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Sucrose synthase; TAIR: AT4G02280.1 sucrose synthase 3; Swiss-Prot: sp|O24301|SUS2_PEA Sucrose synthase 2; TrEMBL-Plants: tr|K7KGC7|K7KGC7_SOYBN Sucrose synthase; Found in the gene: LotjaGi1g1v0763100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:133577991..133583215) extracted from Lotus japonicus Gifu genome v1.2.

CTAAACACAGTGAAATAAATTAAAAGAACAATTTTGACTTCATGTGACTTTTTTTTTTATGTATGAATTTATTTAATTTT TTCTTAGTGTCACTTTACTTATGCTGTCATCCAAGCCTTGCTAATGCTACATAGTTAGAAGGGGAAGAATATCACTCAGT GTTTTTGTTGGTAGTTACTATTAGTTAATGAGTGAAACTGTCATATTGGGGAAAGTTACTTGAGCATCACTTTGGAAGAT TTTAAGATATTGTATGAAACATGTGTTGCATGATCTCTGTGGCAGGAAGCCATAGTTTTGCCTCCTTTTGTCGCAATAGC GGTTCGTCCAAGACCTGGAGTCTGGGAATATGTCCGTGTTAATGTCTTTGAACTCAGTGTGGAACAATTGAGCGTTGCTG AGTATCTCAGCTTCAAAGAAGAACTTGTAGATGGAAAGTAAGAGTTTACTACTTAGCTTGTACTAATTATCTCAGATTCA AAAAATTAGATGGGAAGTACTATAGCTTTGACTGATGAAATGAATGTTTTTGTTTTATGCTGTGCATCAGGGTTAATGAT AATTTTGTATTGGAGCTTGATTTTGAGCCATTTAATGCAACATTTCCTCGCCCAACCCGCTCCTCATCCATTGGCAATGG TGTCCAATTTCTCAACCGCCACCTTTCTTCGAGTATGTTCCATAACAAAGATTCCTTGGAGCCTTTGCTTGATTTCCTCC GAGCTCATAAATATAAAGGCCATGTAAGTGCTATGTCTGTCATGCACCTTTTACTTCTAATAAGGTGACCATGCTTGATT ACAACAGCTATAGTTTCAAAAATGCAACTAGACCCTGTATTTCTCTGCCCCTCCCTCTCTATACATGCATCTTAAACTCA GTAGCCAATGCCATAAATGTAACTTAGTTTTGACACAATGAGTCTATAGATAGTGAATTTTTCTCTCCCTGATTGTCATG TTACAGGCACTGATGCTAAATGATAGAATAAAAACCATCTCTAAACTTCAGTCTGCTTTGGCTAAAGCCGAGGATCATCT TTCTAAGCTCGCACCTGATTCTCTCTATTCTGAGTTTGAATATATGTAAGCTTATGTTTCATAATAGTTTTCATGTGTTC ACTTCTCAGCATGAATGATGTGAGAAACTAGTCATAGATTTATGTCTAAATTTCTTTCCTTTGATTCTTTTCTAAATGTA GATTACAAGGAATGGGTTTTGAGAGAGGCTGGGGTGATACTGCTGAACGCGTGTTAGAGATGATGCATCTGCTATTAGAT ATTCTTCATGCTCCTGATCCGTCTACACTCGAGACTTTTCTTGGGAGAGTGCCTATGGTGTTCAATGTTGTCATATTATC TCCACATGGCTACTTTGGGCAAGCCAATGTCCTGGGTTTGCCTGACACTGGTGGACAGGTATTCTTATCTTTCATATGTC ATAAGAGCAATTGAGCTGGAGTTGTATACATTTAGTGTCACCTCTTATTAGTACTCACTTCCCTTGGTTGTTTCCTCCAT CCTTTCATCTTGTATCGTATGAATTATATGAATGTCATCTTAAGTGAAAGGTTTTATTTGCAGGTTGTTTATATACTAGA TCAAGTGCGTGCTCTTGAGAATGAAATGCTCCTTCGAATCAAGAAACAGGGACTTGATTTCACTCCTAGAATTCTAATTG TAAGTGTGACTTCTTTGTTCAGGTTCTTCATATTTGACAAGGTTGTTTGATAGTTAATCATGTTTTCAGTTCCGACGAAA TTAAAACTTTCTGCTATTTTGAAGGTTACAAGGTTAATACCTGAATCAATGGGGACAACATGCAATCAGCGGCTAGAAAG AGTCAGTGGTACTGACTACACTCATATTCTGCGTGTGCCGTTCAGATCAGATAATGGAACTCTGCATAAATGGATCTCAA GGTTTGATGTATGGCCTTATCTAGAGACTTATTCAGAGGTAAATCCCCATCGACGTGTATAGCTAGAATCAATTGCTTGA TTGTGAACAATTATCAGGAATTTAACAATTATCAGGAATTTAATGGTTTCATAGCTTAGTTTAGGCATGGTGAAGAATTC TAATATTGCCCAGCTCATACTGCATGTGCTAGCATTTCCACTTGATATTGATGGTTATGTATCTCAACAGGATGTTGCCA GTGAAATTACTGCTGAGTTACAAGGTTATCCTGATTTTATCATTGGAAACTACAGTGATGGGAACCTTGTTGCATCTTTA TTGGCTTATAAAATGGGAGTTACACAGGTTCTTATTTCTCTTCTTTGTCATCTTTATTTTAGAAAAAAAATAGAGGTTTA ATATGGACCAATATACTGTATGTATTTTCATATTTAGACACACACACACATACATACATATATGGAACATACATAGGATA GCGTCCCCATTTTTTCTTTGGTTCACCTGTTTTATTTGAAACATTGATTCGTTCTCAATCTGAAATAATAAAAAAATGTT ATTCTTCCTATTGGAATTTGGTCATGCCGGGTATGAAAAATTACTGTACAAACAATGTGAAAGCTCATGTTTTCTTCTGC TGATAATGTAACTCAAACCAGTCTTCATATGTGTAGTGCACAATTGCGCATGCACTGGAGAAGACAAAATATCCAGATTC AGATATATATTGGAAGAAATTTGAGGACAAATACCATTTTGCATGTCAGTTCACTGCTGATCTGATAGCCATGAACAATG CTGATTTTATCATCACCAGTACATACCAAGAGATTGCAGGAACGTGAGTACTTCTTTCATGATATATGTTGTACTTCATG AGTTGTGATAAGTCACTTGTGATTCTGCTCTACAACCTTCTCCCCTTCAGCTGGCTTGTTAATATTACCAATTATATGAC TTTGTTCTTTCATTGCTTGTATAAGTACATGATTATTTGTTTTGGAGATAAAATTAATACAAATTTGTGCATGTTTTTAA ACAAATATATGCTCCACATATCACATTCCCATGCTTATTTTAAATTTGATTTGCTTGTTTCTCGTGGAACGTTGTGTAAC CATTTTAAATTGCATCTTTAAGCATCATATTTAATAATGAATTTTCCAAAAAACTTATATGCTGTGTCTGGTGTTACATG GCTTTTTGGCTCAAGATTCTTAAATTATGAATGGTGTCTGTATTCGCTTGGCTTGTGAAAGCTCACTCAGTTATAATAGG CTAAAGATACCTAGTCATTTCTATTGCTTCGGAGATCCTTCTCTCAGGCATATGACCTAGTTATTAATTTGCTAGGATTC ATCTTTAGGCTTCTCACATATCCATCCCTTGTGCTAAGTTACATTTCTTTCCAAAGTTTTTTCCTTTGTAATCTGTATGT ATATATATATATATATATACACATGTTAGGTTTTCAGTCAAACTAATTGTACTAATTTCATTTTTTATTAACTTATGTTA TCTTTCAGGAAAAATACTGTTGGGCAGTATGAGAGCCACTCGTCTTTTACTCTTCCTGGACTCTATAGGGTTGTTCATGG AATTAATGTTTTTGATCCCAAGTTCAATATTGTCTCTCCTGGAGCAGATATGTCAATATATTTCCCCTACTCTGAGAAGC AGAAGAGACTTACAGCCCTGCACAGTTCAATTGAAAAGCTATTATATGATTCTGAGCAGACTGATGATTGCATGTGAGTC TAGTTTAGTTGCAGAAAATTTTAATTTTGGTTATTTACTACTAAAACATTCAGTATATCCATGAGTAATTGTTCTTCTAA TTAATTTGGTAATTCTACTTCAGTACCCATGATCTAGAGGATCAACACAATGTAAGTTGATGTAGTTGTTATGCACTATG CAAAATCTTATAAGCATGGTTCATTAGCTTGCGATTACCAGTCGTCACTTGTCATTTAGTGCCAATGCCTTGTCTTAACC CCACCCAGACATTCACATACTTATTTCTCATAAGGGATAGAATATCTAACTAGAGCTGTTTGCAAGAACTGCTGAGAAAC ATGTCATTTGCCAGACTTGAATGTGTGACTATGACTGTGTTAACGAGATTATCTTTATAATTGTCCTTGTTTGGCAGTGG TTCACTGAAAGACCGGTCGAAGCCCATCATATTCTCCATCGCAAGGCTAGATAGAGTTAAAAACATAACTGGTTTGGTAG AAAGCTATGCGAAGAACAACAAATTGAGGGAACTGGTCAATCTTGTCATCGTAGCTGGTTATATTGATGTGAAAAAGTCC AGGGACAGAGAAGAAATTGCAGAAATTGAGAAGATGCATGAACTCATGAAAAACTATAATTTAAATGGTGATTTTCGGTG GATTGTCTCCCAAACTAATAGAGCACGTAACGGGGAGCTGTATCGCTACATAGCTGATACAAAAGGTGCTTTTGTTCAGG TATTATACTAATTCCTATTTACTATTTGGTTGATCACTCTGGAGTCATTTACAGTGTATGTTTAGAATTTTTATTTACAA TTGATTCTAAAGGTAAAATCAATTCTAGGGAGAAGCTTCTGCAAACAGCTTCGAGTCGATTACAGAATTGATTGTGTGGA AAACTAAGTTAATGAAAACATGCTAATAATGAATCTTTCTTGCTGCAGCCTGCTTTCTATGAAGCTTTTGGACTTACAGT TGTGGAGGCCATGACTAGTGGGCTTCCCACATTTGCTACCCTCCATGGTGGTCCTGCTGAGATCATCGAGCATGGTGTAT CAGGATTCCATATTGATCCTTATCACCCTGACCAAGCTTCAAACCTATTGGTTGAATTCTTCCAACGATGCAAGGAGGAT CCAAGCCATTGGAATAAAATATCTGATGGCGGTCTTCAAAGAATTTATGAAAGGTAATTAATTTTTTTAAAGAAGTAAGT GTGTTTATATAGTGAATCTAAATGGTTCCATGCAAACATTAAACAGGTATACATGGAAGATATATTCTGAAAGGCTTATG ACTTTGGCGGGAGTTTATGGCTTCTGGAAACATGTTTCCAAATTAGAGAGGCGTGAAACTCGACGATATCTTGAGATGTT CTATATCCTTAAGTTTCGTGATTTGGTGAGTGATATTTTTTAAGTTCTCGTTAGTTTCAAAAAATGGCTGGAATGCTATG GTGCAGGATTATGCACTTTATCATCTTTATGCTCATATGTTCCTTTTATATTTATATATAACATCAATTGTAATAGGGAC AAATGGAAATTCTTACTGGTATTGA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0763100.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTCCATAACAAAGATTCCTTGGAGCCTTTGCTTGATTTCCTCCGAGCTCATAAATATAAAGGCCATGCACTGATGCT AAATGATAGAATAAAAACCATCTCTAAACTTCAGTCTGCTTTGGCTAAAGCCGAGGATCATCTTTCTAAGCTCGCACCTG ATTCTCTCTATTCTGAGTTTGAATATATATTACAAGGAATGGGTTTTGAGAGAGGCTGGGGTGATACTGCTGAACGCGTG TTAGAGATGATGCATCTGCTATTAGATATTCTTCATGCTCCTGATCCGTCTACACTCGAGACTTTTCTTGGGAGAGTGCC TATGGTGTTCAATGTTGTCATATTATCTCCACATGGCTACTTTGGGCAAGCCAATGTCCTGGGTTTGCCTGACACTGGTG GACAGGTTGTTTATATACTAGATCAAGTGCGTGCTCTTGAGAATGAAATGCTCCTTCGAATCAAGAAACAGGGACTTGAT TTCACTCCTAGAATTCTAATTGTTACAAGGTTAATACCTGAATCAATGGGGACAACATGCAATCAGCGGCTAGAAAGAGT CAGTGGTACTGACTACACTCATATTCTGCGTGTGCCGTTCAGATCAGATAATGGAACTCTGCATAAATGGATCTCAAGGT TTGATGTATGGCCTTATCTAGAGACTTATTCAGAGGATGTTGCCAGTGAAATTACTGCTGAGTTACAAGGTTATCCTGAT TTTATCATTGGAAACTACAGTGATGGGAACCTTGTTGCATCTTTATTGGCTTATAAAATGGGAGTTACACAGTGCACAAT TGCGCATGCACTGGAGAAGACAAAATATCCAGATTCAGATATATATTGGAAGAAATTTGAGGACAAATACCATTTTGCAT GTCAGTTCACTGCTGATCTGATAGCCATGAACAATGCTGATTTTATCATCACCAGTACATACCAAGAGATTGCAGGAACG AAAAATACTGTTGGGCAGTATGAGAGCCACTCGTCTTTTACTCTTCCTGGACTCTATAGGGTTGTTCATGGAATTAATGT TTTTGATCCCAAGTTCAATATTGTCTCTCCTGGAGCAGATATGTCAATATATTTCCCCTACTCTGAGAAGCAGAAGAGAC TTACAGCCCTGCACAGTTCAATTGAAAAGCTATTATATGATTCTGAGCAGACTGATGATTGCATTGGTTCACTGAAAGAC CGGTCGAAGCCCATCATATTCTCCATCGCAAGGCTAGATAGAGTTAAAAACATAACTGGTTTGGTAGAAAGCTATGCGAA GAACAACAAATTGAGGGAACTGGTCAATCTTGTCATCGTAGCTGGTTATATTGATGTGAAAAAGTCCAGGGACAGAGAAG AAATTGCAGAAATTGAGAAGATGCATGAACTCATGAAAAACTATAATTTAAATGGTGATTTTCGGTGGATTGTCTCCCAA ACTAATAGAGCACGTAACGGGGAGCTGTATCGCTACATAGCTGATACAAAAGGTGCTTTTGTTCAGCCTGCTTTCTATGA AGCTTTTGGACTTACAGTTGTGGAGGCCATGACTAGTGGGCTTCCCACATTTGCTACCCTCCATGGTGGTCCTGCTGAGA TCATCGAGCATGGTGTATCAGGATTCCATATTGATCCTTATCACCCTGACCAAGCTTCAAACCTATTGGTTGAATTCTTC CAACGATGCAAGGAGGATCCAAGCCATTGGAATAAAATATCTGATGGCGGTCTTCAAAGAATTTATGAAAGGTATACATG GAAGATATATTCTGAAAGGCTTATGACTTTGGCGGGAGTTTATGGCTTCTGGAAACATGTTTCCAAATTAGAGAGGCGTG AAACTCGACGATATCTTGAGATGTTCTATATCCTTAAGTTTCGTGATTTGGTGAGTGATATTTTTTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0763100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MFHNKDSLEPLLDFLRAHKYKGHALMLNDRIKTISKLQSALAKAEDHLSKLAPDSLYSEFEYILQGMGFERGWGDTAERV LEMMHLLLDILHAPDPSTLETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKKQGLD FTPRILIVTRLIPESMGTTCNQRLERVSGTDYTHILRVPFRSDNGTLHKWISRFDVWPYLETYSEDVASEITAELQGYPD FIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEDKYHFACQFTADLIAMNNADFIITSTYQEIAGT KNTVGQYESHSSFTLPGLYRVVHGINVFDPKFNIVSPGADMSIYFPYSEKQKRLTALHSSIEKLLYDSEQTDDCIGSLKD RSKPIIFSIARLDRVKNITGLVESYAKNNKLRELVNLVIVAGYIDVKKSRDREEIAEIEKMHELMKNYNLNGDFRWIVSQ TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTSGLPTFATLHGGPAEIIEHGVSGFHIDPYHPDQASNLLVEFF QRCKEDPSHWNKISDGGLQRIYERYTWKIYSERLMTLAGVYGFWKHVSKLERRETRRYLEMFYILKFRDLVSDIF
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
TIGRFAM
TIGR02470
1 633 633 0.0
IPR012820
PANTHER
PTHR45839
1 632 632 0.0 –
Pfam
PF00862
1 386 386 1.6E-222
IPR000368
PANTHER
PTHR45839:SF22
1 632 632 0.0 –
Gene3D
G3DSA:1.20.120.1230
1 108 108 9.0E-44 –
CDD
cd03800
111 596 486 2.46903E-151 –
Gene3D
G3DSA:3.40.50.2000
113 628 516 2.3E-252 –
SUPERFAMILY
SSF53756
128 596 469 3.14E-51 –
Gene3D
G3DSA:3.40.50.2000
360 587 228 2.3E-252 –
Pfam
PF00534
398 572 175 1.7E-30
IPR001296

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005985
Biological process Sucrose metabolic process The chemical reactions and pathways involving sucrose, the disaccharide fructofuranosyl-glucopyranoside.
Subterm of
GO:0016157
Molecular function Sucrose synthase activity Catalysis of the reaction: UDP-glucose + D-fructose = UDP + sucrose.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0763100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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