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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0768100 |
| Transcript ID | LotjaGi1g1v0768100.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein family; TAIR: AT1G03010.2 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q9SA69|Y1301_ARATH BTB/POZ domain-containing protein At1g03010; TrEMBL-Plants: tr|A0A151TWS2|A0A151TWS2_CAJCA BTB/POZ domain-containing protein family; Found in the gene: LotjaGi1g1v0768100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:134080867..134084106) extracted from Lotus japonicus Gifu genome v1.2.
TAGTACCATTAGGTTCATAAAATTGAAAATGCATACTAGAGGAGGCTTCTCATAATTTCATTTTGGTAATATATGAATGC CTCAAGTTTTTGCTTTTCATTAGAGTTTCCATGTCTATTTCATATGATAATGATTCAACCAGACTTGCTTTTGCAGGCCA ATTTCTGATGTCTCTAGTGATCTCACCATAGAAGTAGGAGCTTCAAACTTTGCACTTCATAAGGTAAAGAAACAAGCTAC AATTCTGATGATAGGTTAAATATTCAGCATGGTTTTCTTCACTTGACATTCTTATATGTGAATGAATAGTTGGATATACA AGTTTGTTATCAAATGTACATAATTATCCAATTTTATTTTTAACATTGATTAATATATGCATCTTTAGCAACTTTGAAGA GAATTTCATGCCTAATATAGTCAGAATCAATTCTGGGAAGAAACTTCTGCGAGTTGCTTCTAGCTGTCAGAATTGATTCT GAGAAGAAAGAAACCGATAGAAACATGCTCTTAGTCCACTAGACATGAGTTCTTAACAATAGCTTCTTTTTCACTATGAA CTCAAAGTCTACAATTCTTTCCCCAGTTTCCTCTTGTTTCTAGGAGTGGAAGAATTCGGAAGTTACTCTCAGAAGCAAAA GTTTTGCGCGTAAGTCTCCAAAATGTGCCAGGTGGTGCAGAGGCGTTTGAGCTAGCTGCCAAATTCTGCTATGGAATCAA CATTGACTTCACCCTCTCAAATGTTGCTATGCTACGTTGCACATCCCATTATCTTGAAATGACAGAAGAATTTGCAGAAA AAAACTTGGAAACCAGAGTTGAAGCATATCTAAAGGAGACAGTGCTCCCAAACACATCAAGCACAATTTCTGTTCTTCAT AGTTGTGAGACTCTTCTTCCCATATCAGAAGAAATCAACCTTGTCAACAGGCTAATCAATGCGATTGCAAATAACGCTTG CAAAGAGCAACTTACTTCTGGCTTGCAAAAACTTGACCACACTTTCCCTTCTAAAACCACATCAACCATGGAACCAGAAA CACCCTCTTGGGGAAAGTCTTTCAATGTTCTCAACCTTGATTTCTTCCAAAGAGTTGTATCTGTTATGAAGTCAAAAGGG TTGAAACAAGACATGATCAGCAAAATTTTGATAAACTATGCTCAAAATTCTCTTCAAGGGATTTGTGTTAGGGACCCCAA TGTGGTAAAAGGAAGTGCACTTGACATGGAGTTGCAGAAGAAACAAAGGGTCAGTGTTGAAGCTATAGTTGGTTTACTCC CAACTCAATCAAGGAAGAGTTCAGTTCCAATGGCATTTCTCTCTTGTCTATTAAAAGCTGCAATAGCAACATCAGCATCA ACTCCTTGTAGATGTGATTTAGAGAGGCGAATCGGTCTGCAACTTGACCAGGCAATACTTGAAGACATTCTAATTCCAAC AAATTCACCTCAAAATTCCCACAGCACAATGTATGATACAGATTCCATTTTGAGGATCTTTTCTACTTTTCTAAACTTGG ATGATGATGATGATGAGGACAATGATGATGAAGATAGTCACTTCAGAGATGAAAGCCAAATGATGTATGAGTATGGCTTT GAGAGTCCTGGATCTCCAAAACAAAGCTCAATTCTCAAGGTGTCAAAGTTATTGGACAACTATCTTGCTGAAGTAGCACT GGACTTGAACTTGTTACCATCAAAATTCATAGCCCTTGTGGAGCTACTTCCAGATCATGCACGTGTTGTCAGTGATGGAC TCTATAGAGCTGTTGATATCTTTCTTAAGGTGAGAATTCCCTTGCAAGTTTACTCAAGCTAAGAGTTATAACCTCTAACC AAAAGTGATTCTAGAATATTTCACAGCGAAACCAAACACGCTATAGTTAGAACTAAGATATAGTGTGTGTTTTTTATTAG CGTTGTTAGAATTGATTTTGAATAAAATTGCTTTCGGTAAAAGTGATTTGAGAGTGAAGTTATTTATACTTGCATACATT TATGGAAAAAGTGATTTCTATAGGGTGATATTGTGATTTCTAGTTATGAAATTAGACAATTGATTATGTGCATGTTTGAT AGTGCATGTTGGTATACATGGTGGAAAACTACAACGAAGCTAAAATCAGAAGCAACTTCTCTTAGCTTTTGCGACTGTCC ACTATGATTTTAGCATGACCGTGGTTTTCCATCCTATATCCAAATATGCACTATATCCACGGCATAAGCTACTCTGCCTA CCTTGTGTTCATAATTGACTTTGGAACTAAAATTAATTCTGCCAAACATCAGTATGCTCTATCACTGTTGATTCAAGATA TCAATGACAGTCGTTAACTGTTGTTTACTTATGATGGAGGTTCATCCAAACATGAAGGACTCAGATAGGTATCGCCTATG CAAAACCATAGATTGTCAGAAACTGTCTCAAGAAGCATGCAATCATGCAGCACAAAATGAAAGGCTACCAATGCAGATTC TGGTTCAAGTTCTTTACTTTGAGCAAATCAGGCTCCGCAATGCCATGAATGGAGAAGGAGGACACAGTAATCAGATCTTC TTTGGTGGTGGGTTTCAGGGTAATCAACAATTCCCTCAACGTTCAGGAAGTGGTGTAGGAAGTGGAGCCATTTCGCCAAG AGATAATTATGCCTCGGTGAGAAGAGAGAACAGAGAGCTGAAGCTTGAGGTTTCAAGAATGAGAATGAGGCTCACTGACT TGGAGAAAGACCATGTTTCCATAAAGCAGGAGTTTGTGAAGCCCCACACTGCTAACAGGCTCTTCAAAGCGTTCACCAGA AAGCTAAGCAAGCTCAATAATGCTCTGTTCCGGAGAAAGAGTGTTGGTAATGGTGGCAGAGAAAGAGAACATAATAGTCC ACAGCAAACTCGGTTCCCTTTTCCAAAGCGAAGGTGCCACTCAGTTTCATAAATGGCCAACCTGGTGTTATAAAGCTCAC ACTATGTTCGAACACATGATAGCAACCTTACCAATGCGACGAGCCTAGTTTTATAAATGTGTAAAATATATGACACAATG TATATTATTCAGCATGCATAAACATGATAATGCATGGCGTGAATATGTCTATATTTTCCACTCCACGGTTTTTAGAGTGC TGATATGATATCAATGCCCTATTGAACTGTTCAAAAGATTGAAATGTTCTATTTAATTTTTTGCATGGAAAGAATTGTTC CTATTCAAATTTGAGAGTGGGATGCTCAATTAAACAACTA
CDS sequence (LotjaGi1g1v0768100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTACGTTGCACATCCCATTATCTTGAAATGACAGAAGAATTTGCAGAAAAAAACTTGGAAACCAGAGTTGAAGCATA TCTAAAGGAGACAGTGCTCCCAAACACATCAAGCACAATTTCTGTTCTTCATAGTTGTGAGACTCTTCTTCCCATATCAG AAGAAATCAACCTTGTCAACAGGCTAATCAATGCGATTGCAAATAACGCTTGCAAAGAGCAACTTACTTCTGGCTTGCAA AAACTTGACCACACTTTCCCTTCTAAAACCACATCAACCATGGAACCAGAAACACCCTCTTGGGGAAAGTCTTTCAATGT TCTCAACCTTGATTTCTTCCAAAGAGTTGTATCTGTTATGAAGTCAAAAGGGTTGAAACAAGACATGATCAGCAAAATTT TGATAAACTATGCTCAAAATTCTCTTCAAGGGATTTGTGTTAGGGACCCCAATGTGGTAAAAGGAAGTGCACTTGACATG GAGTTGCAGAAGAAACAAAGGGTCAGTGTTGAAGCTATAGTTGGTTTACTCCCAACTCAATCAAGGAAGAGTTCAGTTCC AATGGCATTTCTCTCTTGTCTATTAAAAGCTGCAATAGCAACATCAGCATCAACTCCTTGTAGATGTGATTTAGAGAGGC GAATCGGTCTGCAACTTGACCAGGCAATACTTGAAGACATTCTAATTCCAACAAATTCACCTCAAAATTCCCACAGCACA ATGTATGATACAGATTCCATTTTGAGGATCTTTTCTACTTTTCTAAACTTGGATGATGATGATGATGAGGACAATGATGA TGAAGATAGTCACTTCAGAGATGAAAGCCAAATGATGTATGAGTATGGCTTTGAGAGTCCTGGATCTCCAAAACAAAGCT CAATTCTCAAGGTGTCAAAGTTATTGGACAACTATCTTGCTGAAGTAGCACTGGACTTGAACTTGTTACCATCAAAATTC ATAGCCCTTGTGGAGCTACTTCCAGATCATGCACGTGTTGTCAGTGATGGACTCTATAGAGCTGTTGATATCTTTCTTAA GGTTCATCCAAACATGAAGGACTCAGATAGGTATCGCCTATGCAAAACCATAGATTGTCAGAAACTGTCTCAAGAAGCAT GCAATCATGCAGCACAAAATGAAAGGCTACCAATGCAGATTCTGGTTCAAGTTCTTTACTTTGAGCAAATCAGGCTCCGC AATGCCATGAATGGAGAAGGAGGACACAGTAATCAGATCTTCTTTGGTGGTGGGTTTCAGGGTAATCAACAATTCCCTCA ACGTTCAGGAAGTGGTGTAGGAAGTGGAGCCATTTCGCCAAGAGATAATTATGCCTCGGTGAGAAGAGAGAACAGAGAGC TGAAGCTTGAGGTTTCAAGAATGAGAATGAGGCTCACTGACTTGGAGAAAGACCATGTTTCCATAAAGCAGGAGTTTGTG AAGCCCCACACTGCTAACAGGCTCTTCAAAGCGTTCACCAGAAAGCTAAGCAAGCTCAATAATGCTCTGTTCCGGAGAAA GAGTGTTGGTAATGGTGGCAGAGAAAGAGAACATAATAGTCCACAGCAAACTCGGTTCCCTTTTCCAAAGCGAAGGTGCC ACTCAGTTTCATAA
Protein sequence (LotjaGi1g1v0768100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLRCTSHYLEMTEEFAEKNLETRVEAYLKETVLPNTSSTISVLHSCETLLPISEEINLVNRLINAIANNACKEQLTSGLQ KLDHTFPSKTTSTMEPETPSWGKSFNVLNLDFFQRVVSVMKSKGLKQDMISKILINYAQNSLQGICVRDPNVVKGSALDM ELQKKQRVSVEAIVGLLPTQSRKSSVPMAFLSCLLKAAIATSASTPCRCDLERRIGLQLDQAILEDILIPTNSPQNSHST MYDTDSILRIFSTFLNLDDDDDEDNDDEDSHFRDESQMMYEYGFESPGSPKQSSILKVSKLLDNYLAEVALDLNLLPSKF IALVELLPDHARVVSDGLYRAVDIFLKVHPNMKDSDRYRLCKTIDCQKLSQEACNHAAQNERLPMQILVQVLYFEQIRLR NAMNGEGGHSNQIFFGGGFQGNQQFPQRSGSGVGSGAISPRDNYASVRRENRELKLEVSRMRMRLTDLEKDHVSIKQEFV KPHTANRLFKAFTRKLSKLNNALFRRKSVGNGGREREHNSPQQTRFPFPKRRCHSVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 512 | 512 | 1.4E-273 | – | |
| PANTHER | 1 | 512 | 512 | 1.4E-273 | ||
| ProSiteProfiles | 99 | 398 | 300 | 82.022 | ||
| Pfam | 101 | 374 | 274 | 9.4E-84 | ||
| Coils | 444 | 471 | 28 | - | – | |
| MobiDBLite | 507 | 537 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0768100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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