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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0061900 |
| Transcript ID | LotjaGi2g1v0061900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF3326 family protein; TAIR: AT5G24290.2 Vacuolar iron transporter (VIT) family protein; Swiss-Prot: sp|P08452|Y1174_SYNP6 Uncharacterized lipoprotein syc1174_c; TrEMBL-Plants: tr|A0A072VFG1|A0A072VFG1_MEDTR DUF3326 family protein; Found in the gene: LotjaGi2g1v0061900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:13548587..13555273) extracted from Lotus japonicus Gifu genome v1.2.
AAAATCAAAATTCACTACAAACACAGGGACCATTTGACCATTAACCCATAAAGAAACACCCCGTTGTGTTTGTGTGCGAA TTGTGAAGAAATGGCATCATTGACTCTCAACCCTCCAACTCCATCCCTCTCTTTGTCACGCTGCTTCCCCAAAAAACCTA CCATTTCCTGCTCCTTCACTTCCCAATCTCATAAGGTCCCCTCTCTTCTTCTTCTTCTCCTCTCGCTTCAAACGAAAAGC AAATAAAGATGTGATGAAAATGATAATCGATTTTGTTGGTGGGAATAATGCAGTGTAAGAGAGAGTACACGAGCGTGATG ATAGTGCCCACCGGAATCGGAGCTGCTATTGGTGGATTCGCCGGCGACGCCTTGCCAGTGGCTCGCGCCCTCTCTTCGGT TGTTGATTGCCTCATCACTCACCCTAATGTATGTACGCACTTATCCAATTGCATTTTTTCTTAATATTTATCTTCCTAAT TCTTTTTTTTTTCTGAAAATCCTAATATTTTGTTGATATTAAATAGCATTGATTAAAGGTGTGTCCAGCGTCCACTGTGG TGTAAACAAATTGAATTCCGGCACATCAGGAAATATATTTTTGTTTAAATTTAAATTTAAAATGAAAATTATTATTCTTC CTACTTGTGATCCTTAGTTGCCGGTGTAAAACCTGTTTTACGACCGGTTAGAGTGCATATTCATTAAACTCAAATAACTT TATTGATGATTTCTTAGTCAAGAGCCATTGGTGACATTTAGTTTTTCATTTTGAGGAGCTATCAGGTAGATTTAACAGTT AAACATAGGCTTAGTTACATTCTTGGTCTCTGTGTTACACAAATTTAGTCAATTTTCATACACTTAAAATCATTAAATTG TTATTTTTATTAAAATATTTAGGATGTACAATTGATTGGGATAAAAAAATAACTTTGAAAGTTATACAGTGAGAAATTTT TTAAAAAGTTGATAAAATTGAAAGATTTTGTATGATGTGGGATAAGGGTTTGAAGAGGTCGAAAAATTGGAATTTTTTAT TTCGGGTGAAATTTAATATTTTGGTTTGAAATTTTTTAGTGAGAGAAAGTGTAAAGTGATTTATTTAATTTATGAAGATT TTTCTTAGAAATTGAGAAATTGAGATTTTAAGGAGAATGAAAATGCTTTAGAGCCTTAATTGTAACAATTAAAAAGGTTG AGCAACTCAAGTTACTTAAAAAATTATTAGGGACTAAATCACACATTAGCTATACTAGAGGGTATTATGTCTATTGGGGG GGGGGGTCCTTCAGTTTTATTTGTGTTTGATTGTATCTGAGTGTACCCAGCTCCATTGTGTCCATTCAAATAGTATATCA CTCACATTTATGGTTTCAGTATTCATTTTATCTAAACCGTGAAACATCTTATTAGTCAATCAGGCACAGCGGTCTGTGTT GGGGTTGATTGCAATGTAAGTCTCACATTGCTAATGAAGCAGAAAAAAGATCAAGTTATGCATCTTGGAGAAGTCCCACT TCGCTTAGATTAGTGAGGGATGGGAAGATCCAAGGCTATATATAGGGATCTCAAGCTCCTTGTTTCAACACACCAAAAAC ACCAAAGATGTAGTACCTGAAAACACTTTAAGTATATTTGTGTTTTCTTTTTCTCTTATGCTCTTGTTTTAGAGCATTGT GAGATGTAGTTCAAATATTTACTTTAGAGAGTGTGGGTGTACTGGGGTCATGGGGTCATGGGGTGGTTGAGAGTGAAGTC TATGTGTTGTAACAATTTTCACATAGTGTTTATTCTCTGGTTGTCGGTTTTGACAACGACCGTGGTTTTTTCTCCGGTTT TGGAGTTTCCACGTTATATTCTTGTGTTGTTGATTGCGCTCCTGGTTTATTTTACTTCTTCAGTTGTGTTATTTCCTAAC AGTCTGATCATGGTACTGCCTGTTTGCTTTCACCTGACAAAACAACATTGCTTTTTACTATCCATCTATCATTAAGATGG ATTTTATCTATTTTTTTGTAATAATTTTATCATGTTCTTTAATGTGACAATTCTCTAATTTCGCCAATGTATGGTTGTCC TTTTTAACAATGTTGAAGAAATATGCATTTAATTTTACTGGAAATTTTGCAGGTTCTTAATGCGGCGATGCTATACTGGC CAATGCCTAATGCATTATATGTTGAAGGTTATGCTCTTGACAGATTTGCAGAAGGATTATGGGCCTTGCAGCCTGTTCAC CAAAACAGGGTATAGCTATAATAATATATGTGTCTGTGTGTAAATGTGCTGCTTCCTTGATTAGTTTATATCATGCAGTG TTGCAACTTACAAGGTGTTTTCTGCATCATGCTATGTTTCTTTCCACATCAAGCTATGTACTTAGTTATATTCTGTTACT TAGGTGGGGTTAGTTCTTGATGCTGGAATAGAACAGGAGCTCCAGGTTCGCCAGTTACAAGTAGCTGATGCTGCAAGAGC TTCCCTTGGATTGCCTGTTGTAGAATATATTGTTACAGACACTCCACTGAAGGTATCTACTATCCAGAATTTTAATGAGC ATATGTAAACCAGCCTAAATTTTTAAAAACATTTTTGTTGTATTTGGCATACCTTTGTTTATAAAGTGCATGTTTGGAAA TTCTTCTAGAATTGATTCTAAAGCCAAACTCAACTATGAGGAGAAGCGTCAGTGACTAGCCTGTGGGTTGTGGGCTGTGG CTGTCCAAATAATCCAAACATGCAATTAGTCATACAATTTGCGAATCATTAATTTGGTGCATTTGTTAAAGGTTGATGGG AAGTTTTATGATCAGAAATGGCTAACTGCTATTCATCTTAATTTTGGGAGCACCTTGAAGTTAGCATGTGATGTCTCACA AAAAAAATTATTAGCCATGTCATTGTTAGATACTTGAGTCTAATTTTAAGGTGACCAGATTTATTATAATTACTTACTTT ATGCCAACAATGGTGAAATTTTCTACTTTTCTTACTTTTTGATTGGAATGAATCACATGCAAATCAAAGTTAAAGGGTTT GTAGTTGTAACACTACAATATATGCTATTTTGTGAACTAGAACGAACAAAAACAAAACTTAACAGTTTTAACCGGATGAA ACCAGGCCACTTATCTTGGTGTTATATGTGTTCTCTTTCTGTGTCTCGAATTTTAAACTTGGAACAACTTTGCACTCATT TTAGACATGTCTTGAAGTAGTGTTTATTTTGTTCTCAGCTCTCGGAGTTGGTTATGTTTGAAGTTGGATAGAAGGAAGTC TTCAGGCTTGTCTAATTGTCTATTAGTCGTGATCTGTAGCAAATTAAAGCCTAGCCAATGTTAGAGCAAGCTTACGATCT TATATAATACAATAGTTTGACTTGTATTAAATTTTACAGGTAGAGAAGTGGGTTGATCCTGAAACTGGCCAATCAACAGG GAGGATTAAGCACCCAGATTCTTTACTTAGAGCTGTGCAGACTTTAATGAATAGGTCAAAAGTGAATGCCATTGCTGTGG TTGGACGTTTCCCAGATGATGATACAGATGATGTAGATGACTATCGGCAGGGAATGGTGAGGCATTTAATGTTTATTTAA ATAGTATGGCAACCTACTAAATACAGAAGAAATATAATTTTGTTAATTGTGAAAGTTATACTGGATTAAAAGAAATCATG GATGATATTGCTCTTTCTCTTTCGTGGTTCTCCTCCCTTCTAAGTTTTCCTGATGAACACAGTCATCATTCTCTTCCATA TTGTTCTTGAATTTTTAACTTTTTTTTTATAAGCTCTTGAATTTTAACTTGATGTTAAGATTTTCAATCAGTTCTTGACC ATTGTGCTCTAAATTCCAGCAGAGCTGGCAACTTCTGATAAGAACCTTGGGAGAACCACACCACAAAAGCTAGCTGTTGT AGTTGGAGAGCCCAAGGCCTTATAAACCCCACATTAGAATCCCATACTTCCAATGTGGGACTCAGTCCCATACCTTGCAA TGGGGTCCTAACATCCCACCACGCTCCGCAGCCCCGGCGCCCACGCGGGCTGGCTGTGCACTAGCCCCACGACTAGTCCC GGGCGAACACTACAATGCCGGCGTCACCACCCGCGCCGCTCGTTTGCAGCTCAGAGACATGGTGGAAGGCTCTGATACCA TTGATAAGAACCTTGGGAGAACCACACCACAAAAGCTAGCTGTTGTAGTTGGAGAGCCCAAGGCCTTATAAACCCCACAT TAGAATCCCATACTTCCAATGTGGGACTCAAGTCCCATACCTTGCAATGGGGTCCTAACAACTTCTCTTATTTTTTTCTC ATGCTTAGTTTTTCTTTTAAACATTTATTAGTCATACATTTTCATGGTCAGAAGTTCAGGAATGAGTCTTATTGTATCAG TTGGTTGCTGACATTTGATTTCCTCTTTTTCACCTTGTTCAGGGGATAGACCTATTGGCTGGAGTTGAGGCAGTTATAAG CCATCTAGTGGTGAAGGAGTTCCAAATTCCTTGTGCACATGCTCCTGCACTTGCTCCACTTACCATGAGCCTATCTCTAA GTCCAAAATCAGCAGCTGAGGAGGTAGGCTAACTCTAGATGACAACTCATTTGAGCTTTTGTTCAACTTAGTAGAATAGG ATAGCTGCCATGTTTGAACTAAATGTAACTTGCAACCTGAGGTCACAATGGAGTCAATCAAGTCTGAATTTGTTTGACTT TCTCCAATTAGCACGTTAGAAAATTTCAGTGAAGATGAAGTAAAAGAAATTTAAAGTCACCACGTTTTGAACATTAGCAA TTAGAAATCTTAATCGTAAGAAATAGAATCTTCAAAGTTATAAGTTGGAATGAAAAGGAAATACCCCCGTACCAATTTGC AAACAATACATAATCAACAACTATACCTTGTCCTACTAGAAGTACTCTATGAGGTTGGCTAAGTGTGTGCATGGGTTTAG CCTGTAGTGCGTTCAGCCGAATCGGGAAGTGGGATATCGAATCCCGAGGCTCTAAATGTGAAAAGACAATGGACTTCCGC TGGCGTTGAACTTAACCAAACGTAAATACAAACAGAGCAAATCGATTAGGCTCTATCAAAAAACATCTTTTTGTATAAAG CCATCTAGAGTAATGTTTATGCTGAAGTTTTCCTCATTCCTCCTTTACCCCTTTATATTAGGAGGTCTTCAATGTGATTC TTTTGGAAGAATTAATGTCTCATTAAATGAATGAAAAAATTTATACTTGTAGAAAATGCTATATTAATGTTAAGTACATT ATCAATTAGATATTCTTGTTCTCTGCACTTGTGTGAGTAATTGTACTTGATGATAACTTTCTTTTGTAAAATAGATTGGT TACACCTTCCTGCCATGTGTGCTCGCTGGCCTAAGCAACGCTCCACAATACATGGTCATGCACTCCGAATCCACGGACAA AGGTTGCATAGTGGCACGTGATGTGGATTCTTTAATCCTTCCAAAAGATGCTTGTGGAGGGGCTGGAACTCTTGCATTTG CAAGAAATGGAAAAAATAAGGTATAAAGCCAAACACATTAATTTTCCAAATTTTTTGTTTGATCAGCAAGAACAACTGTT GGCTGATGGCATATTACCTTCCATCCATCTGTACAACAAACTGTGTCTAGAAATTTCTGAGACTATTGCTTCAATTTATG ACAACACGAAATTTTGTTGCAGCCACTTATAATTGCTGTGGAAGAAAATGAAACAGTTCTGGATGATACTGCAGATAAAC TTGGTCTTGAAGTGGTATGCAATTTTTTATTTTGTTCATTTGTTCTTTCAGAAGATTAGATAGTAACTTTATTTATTTTA AACTTTGTCATTTTAGAAGATTAGATAGGATCTTTATCTATTTGAGTTGAAATTCCCTACAAATCAATTGGCACAAGTTC TGCTGATTATATTTGAAATTTGCTCACTAAATGCCACGAAAGTATAGATAAAATGGGGAAAATTGTAGACAAAAGTATAG ATAGATATATACCATGAGCAAGTGGATCAGCTGGTGGGAGTTGATTCTTCTTAACCAGAGGTCTCGGATTCGAGCTGTTT GTAAGCTATGCTAAATACTTGTTGTGGGTGGGATAGCTAGACAAGAAAATAAAATTATCATTTTAGTTCATTCAAGAGCA AGTTTTTTTTTATTTTTACTTTTCATATGTAGAAGTCATAATTTAAAATATAAGCACCATGTCAACAGTCCTTTATTTTT CTTTCATTGCAATTGAAATGAAAGCATTTTGGTTGATAAAATTGCCTCTTCTGCAGCTGCATGTCTCAAATTATTGGGAG GCCATTGGAGTTATTGCAGCTCACAAGGCGGGGATAGATCCATATTCTCTTAGACGAAATAAAATTCTTAACATAGGGTG CACTCCTTGTATGCCTGTCAATGGTCATTCCATTTCAAGAGAAAGAGCTATCTCCTGATTAAACATTTGAGAGTTTAAGG ATAATATATCATTCCTTTTAGTTATATATTTAACCATTAGAGAAAGTAGAGCATTGTCTTCTAGGTTTTGTGTCTTATAG CCCATAGGTATTTCCTAGAAGGTAGTAATTCAACTTCTAACTATCATTTAACATGAAAGATCAAGTTTTAACTTTTCAAT ATGGATTAGTTTCAGAAATGATACTTAGACACCCAAACCGTGCAGGC
CDS sequence (LotjaGi2g1v0061900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCATTGACTCTCAACCCTCCAACTCCATCCCTCTCTTTGTCACGCTGCTTCCCCAAAAAACCTACCATTTCCTG CTCCTTCACTTCCCAATCTCATAAGTGTAAGAGAGAGTACACGAGCGTGATGATAGTGCCCACCGGAATCGGAGCTGCTA TTGGTGGATTCGCCGGCGACGCCTTGCCAGTGGCTCGCGCCCTCTCTTCGGTTGTTGATTGCCTCATCACTCACCCTAAT GTTCTTAATGCGGCGATGCTATACTGGCCAATGCCTAATGCATTATATGTTGAAGGTTATGCTCTTGACAGATTTGCAGA AGGATTATGGGCCTTGCAGCCTGTTCACCAAAACAGGGTGGGGTTAGTTCTTGATGCTGGAATAGAACAGGAGCTCCAGG TTCGCCAGTTACAAGTAGCTGATGCTGCAAGAGCTTCCCTTGGATTGCCTGTTGTAGAATATATTGTTACAGACACTCCA CTGAAGGTAGAGAAGTGGGTTGATCCTGAAACTGGCCAATCAACAGGGAGGATTAAGCACCCAGATTCTTTACTTAGAGC TGTGCAGACTTTAATGAATAGGTCAAAAGTGAATGCCATTGCTGTGGTTGGACGTTTCCCAGATGATGATACAGATGATG TAGATGACTATCGGCAGGGAATGGGGATAGACCTATTGGCTGGAGTTGAGGCAGTTATAAGCCATCTAGTGGTGAAGGAG TTCCAAATTCCTTGTGCACATGCTCCTGCACTTGCTCCACTTACCATGAGCCTATCTCTAAGTCCAAAATCAGCAGCTGA GGAGATTGGTTACACCTTCCTGCCATGTGTGCTCGCTGGCCTAAGCAACGCTCCACAATACATGGTCATGCACTCCGAAT CCACGGACAAAGGTTGCATAGTGGCACGTGATGTGGATTCTTTAATCCTTCCAAAAGATGCTTGTGGAGGGGCTGGAACT CTTGCATTTGCAAGAAATGGAAAAAATAAGCCACTTATAATTGCTGTGGAAGAAAATGAAACAGTTCTGGATGATACTGC AGATAAACTTGGTCTTGAAGTGCTGCATGTCTCAAATTATTGGGAGGCCATTGGAGTTATTGCAGCTCACAAGGCGGGGA TAGATCCATATTCTCTTAGACGAAATAAAATTCTTAACATAGGGTGCACTCCTTGTATGCCTGTCAATGGTCATTCCATT TCAAGAGAAAGAGCTATCTCCTGA
Protein sequence (LotjaGi2g1v0061900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASLTLNPPTPSLSLSRCFPKKPTISCSFTSQSHKCKREYTSVMIVPTGIGAAIGGFAGDALPVARALSSVVDCLITHPN VLNAAMLYWPMPNALYVEGYALDRFAEGLWALQPVHQNRVGLVLDAGIEQELQVRQLQVADAARASLGLPVVEYIVTDTP LKVEKWVDPETGQSTGRIKHPDSLLRAVQTLMNRSKVNAIAVVGRFPDDDTDDVDDYRQGMGIDLLAGVEAVISHLVVKE FQIPCAHAPALAPLTMSLSLSPKSAAEEIGYTFLPCVLAGLSNAPQYMVMHSESTDKGCIVARDVDSLILPKDACGGAGT LAFARNGKNKPLIIAVEENETVLDDTADKLGLEVLHVSNYWEAIGVIAAHKAGIDPYSLRRNKILNIGCTPCMPVNGHSI SRERAIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 16 | 405 | 390 | 9.0E-226 | – | |
| PANTHER | 16 | 405 | 390 | 9.0E-226 | ||
| Pfam | 41 | 380 | 340 | 3.8E-156 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0061900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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