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LotjaGi2g1v0160500.2

Overview

Field Value
Gene ID LotjaGi2g1v0160500
Transcript ID LotjaGi2g1v0160500.2
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description 65-kDa microtubule-associated-like protein; TAIR: AT5G51600.1 Microtubule associated protein (MAP65/ASE1) family protein; Swiss-Prot: sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3; TrEMBL-Plants: tr|A0A151U5S8|A0A151U5S8_CAJCA Protein regulator of cytokinesis 1; Found in the gene: LotjaGi2g1v0160500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:56306424..56312446) extracted from Lotus japonicus Gifu genome v1.2.

CTCTTAACGGTTCCCATTCTTCTTAAAACGGCTACATTCCCTCTCTCTCTCTCTCTCTTCCCAAACTCACAAAACTGCAT TTTCCTGGAAAATCCATTGTCATTTTCTCAGGAAAAAGCACAACAATTCCTCCTTTCATCCCAATCCCTTTGCTCACATT CACAGGTCAGCACTTCCTTCACTAAATTGGTAAATTTCTCCTCTTTTCTTTCTGGGTTCCCTCAAAGTTTAACCCTTTCG GTTTCTATTTTCTAAGGAAAGTGCGGGTAACAGAAAAGTTTCCAACGTAGGTTCCACAAATTCCCCCAAGAGAGAGAGAG AGAGAGAGAGAGAGAGAAAACATGAACCTTAATTTAGCATCTTTCTATGTAGTTTCTGTGTTCTTCACATCCTAGGTCAT TGGATTATTCTATATTTTCCTCTTTCCCACATTCTTAATTGGTCATGTAATGTCTGTGTTTCTGTTTTCAATTGTCCATT TGGGTTGCCGTTTCTTCGCGCTTGCTTTTAAGTTTGAATTTGAGTTCTATTGAATCTCAGGCTTCAATTTGTTATGTTTG GTTGTCTTCAATTTTTGCCTCATTGGATTAAGTAATTTTATTAACAACTATGATTCCTCTTGCATGGTTATCTGTTTGAA TCATTAATCATGGGTTTTAACTTTTAAATCTGCTGCAAGATTTTGTTGATTTATATTTCTGTGATGAGTCAATTTCTAGT CAGTTTATTTAGAATGTTGATTAATGTGTTGCAAGTTTCACTTTATTAAATTTTCTTTTGGAATGTTTAAAGAACATTCT TTTTTTAGTAGGTAAAAGTGTTCCAAAATGTCTATATCTCAAAATGATCCTCTTTTGCAAGCTGAAACAACATGTAAATC ACTTCTTCAAGAGCTTCAGGTACACATAAATTTTGCTGCAATTTTCTTTGCTACTCCCCCTTCCACAAGCCAATTAAAGA GCATTCAGTAAACTGTGAATATAACAATACTTTTGTTGGTTTATTTTTCACACTAGATAATATGGGGTGAAGTTGGAGAG TCTGAGACTGAAAAAGATAGAATGTTGTTTGAGATTGATCAAGAGTGTCTAGATGTATACCGAAGAAAGGTAGATAAAGC TAATCGGTCTAGAGCTCAACTAAGGCAGGAAATCGCTGATTGTGAGGCAGAACTCGCAGCTATCTGTTTAGCTATGGCAG AGAGACCAGTACATATGAGGCAGGTTGGATATCTACAAATTGCTCCTTTTTTAATGCTGTGTTAGGGCATGTATTTGTAT TGTTGCTTAAACAGGTGGAAAAATGAGGTTAAGTAAATAAAAACATGTTTAATGTAATTTGTGTGACAATAATTTGGAAT GGTTTCGTGATGTATTAATTAAATTAGTTTCTTCGCATTAATAAGAGTGTGTGCACATATTTGTATCTAAACTGTTTTAG TGATTACTATACTATGTATTAATGTGGCTGTTGAATTTCAAAGTTGTTACTGTTGAATTCTGCTGGCAAGATTATTTGCT ATCCAATTGATATAATGAGAAAAGGATTGGTTGTTTTTTGCCTCTATTTTTCTAGTCTGATCAAAAGGCTGGAAGCTTGA AGGAGGAGCTAGCAAGAATTCACCCAGAACTGGAAGAAATGAGAAAAAGGAAACTTGAGCGTAGAAATCATTTTGTAGAA GTCCAGGAGCAGATTCAAAGTACTTCAAATGAGATTTATGGCCTGGTAGAATATATTCCAGCCATTGTAGATGAAACTGA TTTATCTTTGAGAAAGCTTGAAGAATTGCACAGACAGCTTCATGCACTTCAAAAGGAGAAGGTCTATATTTACTTCTACT TCACACACATACTTCAAATTTTTATCACACTATTTTACTCTTCATTTCTGATTTTTTTTTCATGCAGAGTGATCGTCTCA AGAAGGTCCAAGAGCACCTGTACACTTTAAATTCTCTTTGTTCAGTGCTTGGCTTGAACTTCAAGCAGACAGCCAGTGGA GTCCATCCAAGTTTAGGAAATTCAGAAGGATCTAAAAGTGTAAATAATGACACCATCGGCAAATTGGTTGTTGCTATACA AGAGCTGCGGGAAGTAAAATTACAGAGAATGCAGAAGGTAAGGCCTCTTTAAGATATGAAACATAACTCTAGTTGTAATT CATGTTATTTCTTCTAGTTTAAAGTCATGAGTTGTTTATGGTCTGGCAGCTACAAGATCTAGCGACAACAATGCTGGAGC TCTGGAATCTGATGGATACACCCATTGAAGACCAACAGAGGTTTCAGAATGTTACTAGTAATATAGCTGCTTCAGAACAT GAAGTAACTGAACCAAACACCTTGTCTGAGGACTTCATCAATTACGTGAGTTATAATTTTCTGGAGAAAATAAGAACTAC ATCTCTTAATTCTTTGTCGTTCCGAATTCCTGAAGCAGTGGTAATTCCATGCAGGTTGAGGCAGAAGTATCTAGATTAGA AGAGTTAAAATCAAGCAAAATGAAAGAGCTAGTCTTGAAGAAAAGAGCAGAGCTAGAGGAAATCTGTCGAAGAACTCGTT TAATTCCAGAAATTGATAGTGAAGTGGAAAATGCTGTAGAAGCTATAGAGTCTGGTAACTCCCATGTGAGATACCACTGG ATGATTGCAATTATTTCTTCTGTAAACCTTAAGTCTGTATTCTTCTTTCTTATGCAGGATCTGTAGATCCTGTTAGTGTG CTTGAGCGCATTGAACTTCAGATCGCCCAAGTCAAAGAGGAAGCTTTCAGCAGAAAAGAAATACTTGAAAAGGTTGAGAA ATGGTTGTCAGCATGTGATGAAGAGTCCTGGCTTGAGGAGTACAACAAGGTTAGCTTTTTTCATCTTCCTAGTTTTGGTA GCTTACATTAGGTGATTTAGGTTGCAGTCTTGAACACTTACTATACTGTTTAATAACTTGTTATAAACATTTATTGGCGT AATTTCGCCAGTGGTGGTGAAATTGAATGTTTATATTGATATCAGTGTAAGTGGGTCCTCCCTCAAGTAATTGTCAAACT CATAGTGTATTAATTTTATTGTCTTTCTTCCAGGATGAAAATCGTTACAATGCTGGGAGAGGTACTCATCTTACTCTCAA GCGAGCTGAGAAAGCCCGTGCACTGGTTAACAAAATTCCAGGTATTTATAGACCGTAGTTCTCGGTCATATCTGTTAGCT CAATGATTTTAAAACAATTATGTTTTTTCTGTGAGTCTGTGCGTGTTTAATAGTGTAGATTGTAGAATGTCTTTTTCTTT TGTCTTATTCACATTTAGCACATTTCTTACTTGTTTAGAACATGTTTTTGATTTTATTTTGTTTGTACACAGCAATGGTA GACAATTTGACTTCAAAAACTGTAGCATGGGAAAAGGATAGAGGTGCGGAGTTCATGTATGATGATGTAAGTATCCTCTA CCTGCAATGAGATAGTGGCATAAGGAATTATTGGAGGTCATCTCTATAAGTCGGTTACTCAAGTAAATTTTGTGTCAAAC TAATTTGTACTGTTATGTGACTTTCTAGATCCGTCTGCTCTGTATGCTTGAAGATTACACACTACTAAGACAAGAAAAGG AGCAAGAACGCCGTAGGCATAGGGTACAGACCGTTATTGCATTTAAATGTTTCTCCAAAATAAATTTTCTAGTTATAAGA AAAGCTTGAGCTTTTATCTCAAAATTGAAATCCATGCAAAATTTTATCTATTTGTATCATCCAACAAATAGAAGGCTTGT GTTTTTTCTCCTCTAGTTAAAATGTTACATTTCTGTTTAGGACCTGAAGAAACTTCAGGGACAATTGATAGCCGAACAGG AAGTAATATATGGGTCAAAAAGTCCTTTGAAGAAGTCCCCGAGTGTAAAAAAGACACCTAGGACGCCAACTAGTAGTACC CCTCGAACGCCAACTGGAATTGCAGCTAGTAGAAGAGTCTCAACTCCAAGATCTGATTTGAAAAGTACCCTATCATGCAC CCCAAAGAAGACTGACAAAGTGCACCAAATTCAGCCACTAAATTACCTAGATGATGATGGAGATTCATATATATCATCAG GTAGTTTCTCTGGAGTACTTTTTTTTTTTTCCACCTACTTTTTTAGCCACTGGCTTGCAGACTTCTCTCGCCTTATTATG TATGGGTTTAATAATCGTTTTTCTTCCTGTTTGGTTCGGAAGGAAGCAATCTGTTGAGGATTTGTTACCCTTAGTTTTGG CTGAAGTGTGGCAAGGGGATTGTTTGGGATATGTTAGGTTCTCTAGGTCCAATACTTTTATTCGTTTGAGAAAGAAAGGC AACCTTAATATTGTCAGATTCGAACACAATGACATGTTTCTCTGCATTTTTTTTTTCAAAACTGTTTTCGGTTTTTAAGA ATTTAAAAATTTAAAAACATGTTTTCAAAATGTGATTTAAAAACAGTTCTTATTTTCAGTTTTTAAAACTAAAATCTCAA AACATCTATGAGATTTTTAACGTTGTAAAACAATAATTTGGACTTCTATTTCTGTTTCTATAAAACTTCATCTATAAAAC TTCTATTTCTGTTTTTAGTTTTCAAATTACAGTTTTTTAACGTTGTAAAACATTTCATACAAACTGTTATTTTCTTGAGA TTTTAAAACATTTTATGGACTAAAACAGAAATCAAACAAGCCATGAGGGTTTAGAAGAATGTAGTAATGTGCCAAAAAAT AATTAATGCGGAACTATAAGATTGTCGGATGCCTTTTTATGTTTTTCTTGGATTTAGAAGAAGATTCTCTGTTGGTTGTG TCAACTTGTTGCCATCTAAAACAGAACTTCAAAGATTGTTGGATGCCTATTTATGTGTTCCTTTGTTTTAGACGAAGATT CTCCAACGGATTCTCCCAAGTACTCTTGATGGATGGCCTTTTGGTAAGGCTGTATGTGGCACCAAGGAATTGTTTAGGCC CTTATTTTTGGTTTTGATGTTGAAGGTGGAGGCCAAAGCCACATCTCAGCTGCTAGATTTTTGCATAATTTCTTGCTGGT ACATCTAGCATTTCTTTGATGTTTCTACTTCACATAATTTGCACAAACAGCTTTATACTTCGCACTTTTTATGTACCATA TATGTATGTGCATATAGGAAACTCTTATGATTTTCATGTTCATGCAGCTAGAAGAGGACTCAATATTGCTGATGTTACTG GTATTCCCATGAGAAAATGCTCATTTGGTGCTGGAAGTGTCCAGGATGTAGAATCTCCTTTGACACGACAACCTTTTTCT CCCGTCTGTTCGACAGTATCATCGAAATCGAACGTGGCTAATGCCGCAGGTGAGTCTAATATACAAAACAAGAAGTTGCT GAAAGCATTAGAATTTAACAATTTGCCATTCATTACTGCTACCTCAAAGACAGCCGCCACTACTGTTGTAGATGAAGAGA ATATAACTCCTAAGGCAATGCCTCCAACTCCTTCATCAGTTCCTTTTAGAGGTGACTTGGTTCAAGTTCAAGAGATTGAA TACTCCTTTGAGGAAAGAAGGCTCGGTTATGTGTTAGCATGAATTTGCTTTTCTTGGTTTTCTATTTTCCCCAGTTTACA TTGTCATAGTTACCTTTCATGGCAATCTCAAGGCAAATTTAGTTGGCTTACCGGTTATGTACATAATAGTCTATGAGAAG TGGACATGTACAGACAGGGTCTTATTAGTGCAAGATTTTGCAATCTAATTTCATTTGTTTTTCTTCACCAAGAAAAGATT GATCTGAAAACTGTTTTGCTGTGCCAGCTCTGCTCTTCTTTCTGGTTTGATGTCTGCTATAAATGTAATAAGAAATAAGA TTTTATATTAAGAGTAATATATGTGGGAGAGCATATGCACTTTATATTCAACTTTAACTTGAAAAAAGGTTATTTTTTGG CTATCTGGCTTCAAATATTGATTACTGTCTACAGCTGATAATAACAAGGAGCCCAAAAAGGTAATTTTCAGTTTTATAAA CTGTAATGTATTTGTGTAGCATT
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0160500.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCTATATCTCAAAATGATCCTCTTTTGCAAGCTGAAACAACATGTAAATCACTTCTTCAAGAGCTTCAGATAATATG GGGTGAAGTTGGAGAGTCTGAGACTGAAAAAGATAGAATGTTGTTTGAGATTGATCAAGAGTGTCTAGATGTATACCGAA GAAAGGTAGATAAAGCTAATCGGTCTAGAGCTCAACTAAGGCAGGAAATCGCTGATTGTGAGGCAGAACTCGCAGCTATC TGTTTAGCTATGGCAGAGAGACCAGTACATATGAGGCAGTCTGATCAAAAGGCTGGAAGCTTGAAGGAGGAGCTAGCAAG AATTCACCCAGAACTGGAAGAAATGAGAAAAAGGAAACTTGAGCGTAGAAATCATTTTGTAGAAGTCCAGGAGCAGATTC AAAGTACTTCAAATGAGATTTATGGCCTGGTAGAATATATTCCAGCCATTGTAGATGAAACTGATTTATCTTTGAGAAAG CTTGAAGAATTGCACAGACAGCTTCATGCACTTCAAAAGGAGAAGAGTGATCGTCTCAAGAAGGTCCAAGAGCACCTGTA CACTTTAAATTCTCTTTGTTCAGTGCTTGGCTTGAACTTCAAGCAGACAGCCAGTGGAGTCCATCCAAGTTTAGGAAATT CAGAAGGATCTAAAAGTGTAAATAATGACACCATCGGCAAATTGGTTGTTGCTATACAAGAGCTGCGGGAAGTAAAATTA CAGAGAATGCAGAAGCTACAAGATCTAGCGACAACAATGCTGGAGCTCTGGAATCTGATGGATACACCCATTGAAGACCA ACAGAGGTTTCAGAATGTTACTAGTAATATAGCTGCTTCAGAACATGAAGTAACTGAACCAAACACCTTGTCTGAGGACT TCATCAATTACGTTGAGGCAGAAGTATCTAGATTAGAAGAGTTAAAATCAAGCAAAATGAAAGAGCTAGTCTTGAAGAAA AGAGCAGAGCTAGAGGAAATCTGTCGAAGAACTCGTTTAATTCCAGAAATTGATAGTGAAGTGGAAAATGCTGTAGAAGC TATAGAGTCTGGATCTGTAGATCCTGTTAGTGTGCTTGAGCGCATTGAACTTCAGATCGCCCAAGTCAAAGAGGAAGCTT TCAGCAGAAAAGAAATACTTGAAAAGGTTGAGAAATGGTTGTCAGCATGTGATGAAGAGTCCTGGCTTGAGGAGTACAAC AAGGATGAAAATCGTTACAATGCTGGGAGAGGTACTCATCTTACTCTCAAGCGAGCTGAGAAAGCCCGTGCACTGGTTAA CAAAATTCCAGCAATGGTAGACAATTTGACTTCAAAAACTGTAGCATGGGAAAAGGATAGAGGTGCGGAGTTCATGTATG ATGATATCCGTCTGCTCTGTATGCTTGAAGATTACACACTACTAAGACAAGAAAAGGAGCAAGAACGCCGTAGGCATAGG GACCTGAAGAAACTTCAGGGACAATTGATAGCCGAACAGGAAGTAATATATGGGTCAAAAAGTCCTTTGAAGAAGTCCCC GAGTGTAAAAAAGACACCTAGGACGCCAACTAGTAGTACCCCTCGAACGCCAACTGGAATTGCAGCTAGTAGAAGAGTCT CAACTCCAAGATCTGATTTGAAAAGTACCCTATCATGCACCCCAAAGAAGACTGACAAAGTGCACCAAATTCAGCCACTA AATTACCTAGATGATGATGGAGATTCATATATATCATCAGCTAGAAGAGGACTCAATATTGCTGATGTTACTGGTATTCC CATGAGAAAATGCTCATTTGGTGCTGGAAGTGTCCAGGATGTAGAATCTCCTTTGACACGACAACCTTTTTCTCCCGTCT GTTCGACAGTATCATCGAAATCGAACGTGGCTAATGCCGCAGGTGAGTCTAATATACAAAACAAGAAGTTGCTGAAAGCA TTAGAATTTAACAATTTGCCATTCATTACTGCTACCTCAAAGACAGCCGCCACTACTGTTGTAGATGAAGAGAATATAAC TCCTAAGGCAATGCCTCCAACTCCTTCATCAGTTCCTTTTAGAGGTGACTTGGTTCAAGTTCAAGAGATTGAATACTCCT TTGAGGAAAGAAGGCTCGGTTATGTGTTAGCATGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0160500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSISQNDPLLQAETTCKSLLQELQIIWGEVGESETEKDRMLFEIDQECLDVYRRKVDKANRSRAQLRQEIADCEAELAAI CLAMAERPVHMRQSDQKAGSLKEELARIHPELEEMRKRKLERRNHFVEVQEQIQSTSNEIYGLVEYIPAIVDETDLSLRK LEELHRQLHALQKEKSDRLKKVQEHLYTLNSLCSVLGLNFKQTASGVHPSLGNSEGSKSVNNDTIGKLVVAIQELREVKL QRMQKLQDLATTMLELWNLMDTPIEDQQRFQNVTSNIAASEHEVTEPNTLSEDFINYVEAEVSRLEELKSSKMKELVLKK RAELEEICRRTRLIPEIDSEVENAVEAIESGSVDPVSVLERIELQIAQVKEEAFSRKEILEKVEKWLSACDEESWLEEYN KDENRYNAGRGTHLTLKRAEKARALVNKIPAMVDNLTSKTVAWEKDRGAEFMYDDIRLLCMLEDYTLLRQEKEQERRRHR DLKKLQGQLIAEQEVIYGSKSPLKKSPSVKKTPRTPTSSTPRTPTGIAASRRVSTPRSDLKSTLSCTPKKTDKVHQIQPL NYLDDDGDSYISSARRGLNIADVTGIPMRKCSFGAGSVQDVESPLTRQPFSPVCSTVSSKSNVANAAGESNIQNKKLLKA LEFNNLPFITATSKTAATTVVDEENITPKAMPPTPSSVPFRGDLVQVQEIEYSFEERRLGYVLA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR19321
1 640 640 1.3E-275
IPR007145
PANTHER
PTHR19321:SF27
1 640 640 1.3E-275 –
Coils
Coil
49 76 28 - –
Pfam
PF03999
52 653 602 9.1E-133 –
SUPERFAMILY
SSF58104
54 275 222 6.28E-5 –
Coils
Coil
154 181 28 - –
Gene3D
G3DSA:1.20.58.1520
365 499 135 8.3E-29 –
Coils
Coil
462 485 24 - –
MobiDBLite
mobidb-lite
501 551 51 - –
MobiDBLite
mobidb-lite
505 551 47 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000226
Biological process Microtubule cytoskeleton organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.
Subterm of
GO:0008017
Molecular function Microtubule binding Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0160500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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