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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0270500 |
| Transcript ID | LotjaGi2g1v0270500.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | MADS-box transcription factor; TAIR: AT5G60910.1 AGAMOUS-like 8; Swiss-Prot: sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8; TrEMBL-Plants: tr|I3SRR9|I3SRR9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0270500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:74130485..74141072) extracted from Lotus japonicus Gifu genome v1.2.
TGTTTGCACACCACAAAAATAGAAAGATACCCATGTTGTAAAACACGCCCTTTGCTTTGCTTTGATTTGCTTCTTCAGAT TTCGTGCTTGCTAGCTTTTCCCTCAGGTGAATATGAACACTACAACTCTCTCTAGGGCTTATTATTGATCTCTTCTTCTT CTTCTTCTCTTTATTTCAATTGAAAAGGTAAATTAAGTTGTAGAAAAGTTCATCGATGGGGAGAGGAAGGGTTCAGTTGA AGCAGATCGAGAACAAAACTAGTCGGCAAGTGACGTTTTCAAAGAGGAGAATGGGGCTGCGAAAGAAAGCCCATGAAATC TCTGTGCTCTGTGATGCTCAAGTAGCATTGCTTGTCTTCAACACCAAAGGAAGACTTTATGAGTTTTCATCTGAATCCAG GTATATCATATCATATGCACTTACAACCCCTTCGTTATTTGCACCACCTTTGATTGACTTTCCACGTCGTCGTCTATATT TGTTTTCTCAACTTTGTTATAATTAATTAGATTAATGTTTATACTCACAATTTAAATCAATCCACACTGGACGGTTCCTG AATGATAACTCAAATAATAAAAATTGATAAAAATATGGATTGAAAAGTGAGAGGTTCCAAGATCAATCCTACATTGTACT TGCATATATATATATAGATGAAGTTATTGTCTTTTCTAATTTTTTATTATCCTTCGTTAATTTGTTGCTTCTATTCAAGT TACCTACTAAAATCTTCTATCTTTTATATCTTTTATATATATATATATATATATATATATATATAAAACACACTTGAGTT TAACATTAAATAAATAAGAAAAACTCAAGTATTGCATTGTATTAAAAATGTTCTAATAAACAATCATAATTTTCTTTGAA ATAAATATATTAATCAATAAAATAAAAAACCGGAAAAAAATTGTATTCCCAAAATAGTATTTATTAACAAATAATTTAGA CAAATAGTTTTAAAATTAAAATTTTCTATTTATATGTCAAGGAAATTTGAGAATTATTACATTAAAGTTATTAAACCATA AAACTCTCATATCTCTGTATTAAAACACATTAAGAAATACTAATTTCTCTTACTAAAAAACACAGTATATTACAAAATAA TTGAAAACCGAAAAGAATTGTATATTCAAAAACCATTCAACTAATTACATTAAATAACAACATTTATGAACTTAAAATTT AATTTTTTAAAAAAACTAAACTCTTCTTGAGTTTTTTCATTTGAAAATATTAAAAATTAAAATTATTTAATAAAATAATA TTTTTAATAAATAATTTAGATAAAAAAGTTTCAAAATTAAAAAATGCTGCTAAAAGTTATTTAATATGAATTATAACACA TATGCGCATTTTCAAAAAAAATATTTAAATATATTTTTTATCTATGATATATTATTAAAAATCACTCGAGGAATCACAAT AGCGAAAAATAATAATGACCCATGTTGTATAAATTTTTGTTATGAGAAACTTATCCACTTAACATGATCGTAGAACCTCG AGAGATTAGTGTCATGGCTATCATTTGTGAGGAAATATTTGGAAACCAAATAAGTTGAATAAATGACTAGATAATATTTT ATGCTATTTAATTTATAACTTATTATAATTCAAAAAGTTAAAATTAGTTTATTTCTCATGGTCTTGATAGGTCACAATAA ATGACTTTCCCGATTAAAAGTAATAAAAATTATATTAAAACTTATTTCATGATATTAAACACTTATTACTTAACATTTTT TACCTAATTTAAATATTTCAAATTAACTTAATAATTTTTCATATTATTAAATAAAAAAAATTAAATTGTTAAAATTATTT CTATGATAATAATTAAATTTCAATATTAAGTTTGAGTAATATTAATTATTTACACGAAAAAACTCTTATATTTATTGAAA TTTCTTAACACAACTTTTTTATATTTATAATTAAAAATATTTTAACTTTTATTTATTTAAACCATAATAATTTTATCATC TTATTCCCGTTTAGTTATTACTTCTTTATGTTAAAACTCTTGGCACAATTGAAGGGTTCAATTATGAACAGTGGCGGAGC CAGAAATTTTTGGAAGTCTGGGCAAGATTAAGTTTAAGACTAATTAGTCTACACTTGGCGTTTAACCCAGAGTTTTAAAT TGCGGGTTGCAGGTGTTTGAATTGAGATAAAATGAGTATGAAATAGAAGGAAAGAAAACAAATTTTTTATAAAAAAATAA ATAAGTGAACATAGTGGCCCAAACACTATAACTTGTGTATAAAAAAAATGCAAAAAAACAATTGACGGCTGGCCCATTAG CATTTCATGACCTAAATGACTAAAGGTCAAGACATGTTTTGTCTTCAACCTTTTTCTTTTCAATTGGCAATGCTACATGC AGCTTTTGCATACCTTTTCTATGTCCTCTACATGCGTCCCTTGTCATGGCCACCGTGAGCCTCGCGGTGGATCCGCCCTC TCCGCCACTCTTTCTCTCAGCCTCACAATCACTCTCTGTCTCTCTCCACAATTTCCAAATTCAACTGTGAATCTGCCCCT GCCCTTCTGGTTCTCACCCACCCACAGCTTCTTCGCTCACCGACCGAAGAATTATGTGCAGAATTTTGTGTTAGGAACTT GACATACAAAGCATCTTAGAAATCTGCATGCATTTATGTTTTTTATTTTAATTTGTGTATTAATTAATTGTTCCTATTTA CATGTGAAATAGCATCGAAAACGTGTTGGAACGATATGAGAGACATACCCAAGCAGTGCAACTTGTTGGAGCTGATAAAG AACAACCGGTATGTACCTCATCGGAACATAGTCTTTATTAACAAAATCAGTATAGTTTTAAAAGTCTGGTATACTCTTAG TTACGGTTGAAAATAACTTCCGCATTAAATAGATTTATGTTCAAGATAGTTCTAATATATGCGAAGATAATCATTATCTT TGAGCTAATATTTGAGGGAGAGTTAGATCGCCCAATTATTCTAATATGATATTAGAGTCTATTCTAGATCCATTATCTGA AGACCACCGATAGTGAGAGAGTGTATTGAGATGTCACACATTAACTCGACGGATTTGGTTACCCTCTAAAGTGAGAGTTA CATCCACTAATAGTGATTATTTACTTTGAAAAGTCAATAAAACAATTCAGTCAGTCAATGATTATAATGATTTACTTTAC TTTACTTTGGAGAGTTGGACTTAGAGTAAAGAAATGACCAAAATAACTTTTATATTTAGAAAGACAATTCTCATCTCTGA GTGCTTTTGAGGTAGAGTTAAAACTCTTAAATTCTAATAGTTTATTATTTTGAGGAAATTAGTTTGATTCAGTTCTCTGT TAATAGCTACACGGTTTAGTTAAGCTATCTTTTTTGAAATAGCTGAAGTTTCATTTCAATGATCATGCAATCTTGAGAAT AACATTCTTAAGTTGGGGCAGCAAATAAAATATTTTATACATTATCTACCACAGCCCACAAGAGATTCTTTCTTTTACAC TTGCTTTACTAAGCTATCAACAAATGCATTTGCTTCCCCACAACATTAGAAATTTCATTACAATTCACTTCAGCTCTTAA AATATCACCCTCAATCACCACATTCTGAAATTGAAACTGTTTGCAAAATGAGAGTGCATGTTGAATTGCTGAGATTTCAG CTTCATATCCCATGAATGACCAATGGGTTTAGAGAACGTGGTGATGAGCTTTATATATATATATATATAGCTTCTAACAA ACTACACTTGTAATTTTAATGAATTCAGTCTCATTCTTTCTTTCCTTCTTCCTCTCACTTTGTTAGCTTCTATCAATTAC CTTGTTTCTATATATACATGCCAAAATGCAATTGCATAAAGGGTTATATACTATTTACTGCATGTAGAGAAACTGGTCCT CGGAATGCTTCAAGCTCACCGGTAGAGTTGAAGTCTTAGAGAAGAGCATAAGGTACACATTTGATATTTCACTGTAAACT TTATATATACAATATGGAAGCAGTCTTTAGTGCAACTCTATGCGTTGTTCTTGTTTTAACCTGAAGATCATTATTTCTTC CAAGTGTATTTCAAATCCTTAGTAGCTTTTATGATAACTTGATAATATATATATAGGAACATCGCGGGACATGATCTGGA TCCCTTGAACTTGAGAGAGCTTCAGGGTTTGGAGCATCAGCTTGACACAGCTCTAAGGCGCATCCGAACTAGAAAGGTGA AAGCATATTATCAATTTATTATCTAAAATAAGGTTAATTATGTTTACCATGAATCAAGAAAAATCTAATTTATAAATAAA ATTCTGAAATGAGATTGCCTGAATCTTCATCTCCGGTCGTGGTGGTGCTTGGCCTTGAACGGTTTCTCTAACACGACGGG GCATTCTATCGTTCAAGTCAGTAATGTGCAAATAAAGGATCTTAGAATCTAACAAGAACCCTAAGTTTAGCATAATAGGT AACACGTGTACAAATGAATGACTATCACCCTTGTTTTCAAAGGCTTGATGTTTTTTAGGACGGTCTTTCAAAGTATTTAC GAAGCCTTTAGAAAGTCTTCTGAGATATTAGTTGTCTTTAGGCAGCTTCACTTAGTCGTTTATGAGCAGGTTAGAGTCTT TGTTGCTCGGCTGTGCTAAGACGAGATGTTCTTTAACGAAGTAATCTGATTAGCCTCTACAGTGCTTGCTTAGTCGCAAT ACCTTTTAATTGACGGGATGTTATTAGACCTTTTAGGTCAACCAGAACACTTGTAAATTGATTTTAACACAAAAAGAGCG TATTATAATATAACATTTTAATTTATGAGTGTACCAATTGAAGAAAAAATTACCGCTGTAATTAAGTATTTTTTATTCTG AAAATGACCGACTATTATTATCTTTGGCAGAACACAGTTATGAATGAATCCATCTCAGAGCTGCAGAAAAAGGTTCGTGT GTTTCCTAAGGATTAGCATTGCTCTCTTGAAAGTTCAGATAATTGTTCGTGTATATACTTAAATTAATAAGTTTGGAGTC AATTTCACTGTTATTATTCTCATAAATGCAATAGCTCAGTTAGTTATTGTTAGTTACTGATAATCTGATTAGTTAGTATT TAGCCAACTAATCTCTAATTATCAGTTAGGATCTCAGTTAGTGTTGCTTTCAGTATATATCTTGAGTGTGTAGAACACTC ATTATATCAGAGAAAAAAATCTCTGCTCACTGTATCTTTCTTCAGTTCAATACAATGAGGTTTTCTCTCATTTTCAACTT TCCTTCAAATTGATTTTGGTGGTATCAGAGAAGAATAAGATGATATATGGACAATTTCCTTAGTGGAAGATGATATATTC ACTTATTTTGCTTGATACTCTTCCTTTATCTAATTCTACTTGCTATCATTGCGTTATGGTAGTTCATCTCAAGAAAATGG ATCCTCTTCAGACTTCAGAGGAATCATCTGCATGCATTCTGCAATCTCTCTCAAGTAAAATCTTGACCATATAGTAATTT TTACATTTAATGGTTAAGATTGGTAAACGAAAAATAGAATTTTCCGTTTGAATGAAATTGGACGAATCAGTATGTCAATT GTCATTTTTTACACTTGAGAGGATGGACAGAGAATTGCAATTTTATATATTTCTTTGCAATTATTGAGCTATTACATTTG CAAGAAGTACTTATTTTTATTGGAGTTACAGAAAATCATTAACTTTAGGAGTGTTGGATACTTAACAAACTTGATAGACT AATGTTATATATATCTCCTACAAATTCCCCTACATATAAATGGAACCAAAATTAAATGTTTATTACATTTTTAAGATACC AAATACATTGATTATTCATTTAATACTTGTTATGTTGTAAGTATTTTGCTATTGAGTAGTCCAAAAGTCAAAGGACAAAA CAAGAAGTTGAAACATTATCTTAAAACACTAATTGTATTTCTTGGTGTGTGTTATCTGAGGGTAGATAAATACGAACGAA GGTAATAGTAAAGATATACTACCATATGTACCTATAAATATTCAAATAGTTTAGGAACTAATATTAGCCAAGGAAATCCA ATTAAATGAGTACCATTAGATTGTGTGAGTTACATGTTTTACTACAGCCACTATTCTTATTTATGTGTCTAGAAAAAGAA GAAAGAATTTGTTTCTAATTAAGTGTGTTCACTTATAAATTCAAGATAACATTAACTATCATTTTCTTAATTACCCTACT AGTCCGGTTATGTAATTAGCTTATCACAGGATATCAATGTTTTAAGATCAAGTAATTTAGAGTTTGACCCTGGTTACTCC TAAATATTTTAATGAAAATGTCGAATTTTAGAATAAGGTAAGTGAGTTTGTGCAATTTTCAAGTTTCACGTTCAATGAAC TCTTACGTAAGGGATCGTGAATATAACATAAATCATTCATCAGTATTCACTCAAAACCTTAATCTTTTGGTATAGTTGGT TCATGACATGTCTAGCAATAAAAAGGTAAAATAGAAAGTTTTCAAATGACTATTGTTTTGGCATCCGGTAACACACACAT TTACTGAGCACCAATTATTACCGCTAGTCTAAAAGTCGCTAGATATACGACTCTGTGTACACCCAGAGCTAAGGGACTAC TATTTCAGTACCATGTTAACAAGGTAGTCAAAAGCTAGCTAGCTTTAGCAATAAAGCGGAGAGGGTTCTAAAGTATAAAG CACTAAAGCGGAACCTAGAGCGTACGCTTTAGTAACTTTTAACATTTATGTATATATTTACACTTATAAATACTTATATG CATATAAATGGTATAATTAACAAAAATTATTAGGTATGTCATACATAAATTGTAAAGTACCATAACTCATAATTGATAAT TCATAGGAATGTCATATATAGCTACATAAGTCATAAAATACCAATCCAAAACACAATAAAACTTAAACATCATGTAGTTT CTGGGGTGGGGTGGGTAGCTCACATGGTTGAGCTAAGGGTAATTGCAGGTGAAGGATCAGGGTTCGAACCCTGCGGAGAG ATAATTTGTACTAATTTGCTAACAACTAACATTTGCCTATAAAATGATGTCACGTAGTTCTGAACTTCTCATAATCAAGG TAACACAATAACCCATTTGCCAAACAGAAACAGATCAGAGGGAAACAGAGGAACAACTACTAAAGAAAGAGAGAGTGAAG TAGAACTGGAGAATGAGAGTTCATATCGAAAACAGGGGAGAAGAGAGGACTTCGTCGCTGGAGGACTTTTTCATCAGCGG CAGTGGCGAAGCCCAGATCGAGACTCGCAAGAGAGAGGCGTTCAAGTTTCCTTGACATATGAGTGAGAATGAGTGTTGTT TGAGGGTGAAAACTATATTTTTGCTAACCGGGCCGCAGAAACGGGTAAAAAAGACGAGGTTGTATGGATCTTCATGAAAG CGGTAGAAGCTTCAAAATCGCCATTTTGCTACGCTTCTGCGCTTAACCAACGCTTTCGTCGTGCTTTTGCTAGATTTTCG CTTTAGCAGCCCCGTAAAGCGTCGGGGGCCTTAAATCACGCTTTAACGTGTTAAAGCGCGCTTCTGACTACCTTGCATGT TAAGATGACCCTCGTCGATTGGTACTTTACCCCATGCTGACATGCCACTTTGCCTAATAGGTAGTTTAGGCGAAGCCAAT GATTGAAGGAATCCAGACCTAGGGACCATAAAACTCTAACATAGGGTTGATATTAGCAAACAAGCTTCAAATCCGTCCAA CGCTTGCCAAACACATCGCATGCGACATGATTTCTCGTCCCTCTAAGAACTCTTCTGACAAATACTGGTTAGCCTCAAAT GACTGCCTGCCCACCCATACATCCCACTAAAACCAGGGCAGTCAAACCCTTGCCGCAGTCAGTTGCATTTTTATGACTAC ATCTCGATGAAGTAACTTGTCTCATGATTTACCACGCTCTTCTTGAAGTCAACGGCCCTCTACTCGAGGCGTAGGCACAA CACTCAAAGATCTTATACAATATGCAATCCTTCCCCTAACCATCCGATTAAACGAAGTATTAAGGAATCCAACGGCTCCT TTCGTCGTTGTACCTCGTACTCATCATAACAATTGCTCCAACCTCGAACTCTCTTACCCCGAAACCCTCAAAACCGAACG CTATAAATGGAAAGTTCCTCAAGGCATAAGGTACATATATCCTCAACCGTGTGAATGTGCTTTTACTTGGAGTTTCAAAA ACTAAGTCACTGTCACACTTTTTACTTCTTAAGCAAGTAATGACATAGAGCTATTATTCCTTCTTTTGTAACGATTGTGG AGCAGTTGCCTTCAACCTTATGTTTATGTAGTATTTTAATTGAGTAACATAACCAACCCATATAAGAGAAATTGCTCATT TTCTTAGTCTTCATCGATTTTTCTTTTCCTAACGTATACATAGTTTCAAACTTCACAGAAAAATGTAGCTATTTTTACAC GATTGCAAGGCACAAACACAATTTGGAATAGAAATTTAAACTTCTCGTCTGGTTATAACAGGCAAAGGCGTTGCAGGAGC AAAACAATGTGCTAGCAAAGAAGGTAGAGGTCACATGTAACATTTCAATCTAGCTATCCGTCTTGTAGACAAGAAAACAT AAGAAAAAGAGTTAATTTTTCTTGCATTTATGGCTAGATTAAGGATCAACAGAAGACAATGGCTGAACCTCTGCACCCTC CTCTACAGAAACACTTGGCCAAAATTCTTCAGGTCTCAACATGGGCACTCCAGAGCAACACTCGCCACAAAGACTAGATC CTTCTTTAACACTTGGGTATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTATCTATGTTATAGAGAAGGAATC AATCTAAAAAAATTAGAGGGAATTTCCTTGTTGAATCTGATACTAAAATGTTAATCTAAACAATGAATAGGGTTCTTAAC AATGTTACAGCTTAGTAGTTGGCAGAAACAGTTGCATGGATTGTGTTTGAGTAAATGACAGTCTTGATCATAAACCAAGC CCATAAATAATCCATGTAGTCCAAATGTAATTTATACAACCTCGAGAACTATTCAAAAGTGCATAATTTTGTTTTTTTAA TAATGATGTATCTCCATATAATTTAATGATTCTGTAAAAAACTTTACTAGCATAGATAGAATAACTAGTCCATAGTTACA ACTTTCTTAATTTCTGTTATTCCGTTGGGATGTGTGTTTTCTCGGAAACCAAACAGGCCCTAAATTCTTGTTTTTTCATA AAGTTGAAGACAGCAGAAGGCTTTTCAATTAGAGAATTGTAATGAACATAGGAAAATTGTCAGTGTACAAAATAACACAA ATTTGATTATTGTGAAATGCTGGCAACATCACCTCCAATTTCTACTGGTTAAGCCTCAGTGGAATTTACTAAATTATATG CGTCCACTCCTATTTTGCCAGGTTTCATTCCCTATTTGGTGATATTACATAAATGTTAACTTGAAAGTGTGTTAGATATT GTATTACTAGCATTCCTCTGCTTATGTTGTAGACACCATCAAACATAAGTGGAGATAAAGAGGCTGGAAGAGCTTGTTAG TTTCACAATTTTTGGCTGCAGAGTAGCCCTTATAGATCCAGTTCTCCTTTGCTAGAACAAATTGTTGAAATGTTTACTGA AAGCCCACTATCATCAAGGAAATAGGAACTGCAGAAAGTTTTGTTATAAATGGAAAATTGTCTGACATACAATTTCACAG CAGTAGCTATGAATTTTAAGCCTGTGTATGCCTAAAGCCATTGAAAAGCCACCAACAAGGTATTATCACATACCTGCAGA AGTCCACTCCACAGTGAGCTAGTCGTCAAATCGGGATTTTGACCTTAATCAGGGAGGGGGTTGTAAATCGTAAATTGCTA AATCATATGATTTTAGCAGATCTCTATATAATATACATATATGTGTGTGTGCGCGCTTATAAGTTCTTATATGCATATAA GATAGCGCAAATAAAAATTGGGATTGGAGAAAGAGAAGAAAAGCAGGGAACATAACTCCAGATTCTAGAATAGAGCAAGC TACCAATTTAGGGAGTAGGGTGTGAATTAGCAGCGATGGCGATTGAATCGCAAGGGGCTCTTGAATCGCAAAATCATCCG ATTTTAATCGCGATTTGACTAGCATGCTTACTAGGACAATTATATCTTATGATATGTACATTATTGTTTCAGATTATAAG TGTCAAAAAGGTGCAGTGGGACTTTACAAGCAACATCGCTGCAGGAGAATGGTTGAAGTTAAAATTGCTCCTAGTAGCAC TACTGTCATGACATCCCAACATGGATGCTTCATTATTATTTTACGAGATGCACCAGCATTACACTATTTTTGAGACGTGA TGAATGTTGAACTCTATTTTGTTGCTACTTCTAGACAACTGCTGGTTATTGTATAGGATTGTGGCCTTCAAATTTGATGG TATGGCCAAAGGTTAAATAATGCAAATGATGTAAAAATCAACTGTTAAGTGCACCAACAAAATGGTACAGTGTAAAGAAA TAGAAAAACTAATGCATCATTACATCCT
CDS sequence (LotjaGi2g1v0270500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAGAGGAAGGGTTCAGTTGAAGCAGATCGAGAACAAAACTAGTCGGCAAGTGACGTTTTCAAAGAGGAGAATGGG GCTGCGAAAGAAAGCCCATGAAATCTCTGTGCTCTGTGATGCTCAAGTAGCATTGCTTGTCTTCAACACCAAAGGAAGAC TTTATGAGTTTTCATCTGAATCCAGCATCGAAAACGTGTTGGAACGATATGAGAGACATACCCAAGCAGTGCAACTTGTT GGAGCTGATAAAGAACAACCGAGAAACTGGTCCTCGGAATGCTTCAAGCTCACCGGTAGAGTTGAAGTCTTAGAGAAGAG CATAAGGAACATCGCGGGACATGATCTGGATCCCTTGAACTTGAGAGAGCTTCAGGGTTTGGAGCATCAGCTTGACACAG CTCTAAGGCGCATCCGAACTAGAAAGAACACAGTTATGAATGAATCCATCTCAGAGCTGCAGAAAAAGTTCATCTCAAGA AAATGGATCCTCTTCAGACTTCAGAGGAATCATCTGCATGCATTCTGCAATCTCTCTCAAGCAAAGGCGTTGCAGGAGCA AAACAATGTGCTAGCAAAGAAGATTAAGGATCAACAGAAGACAATGGCTGAACCTCTGCACCCTCCTCTACAGAAACACT TGGCCAAAATTCTTCAGGTCTCAACATGGGCACTCCAGAGCAACACTCGCCACAAAGACTAG
Protein sequence (LotjaGi2g1v0270500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRGRVQLKQIENKTSRQVTFSKRRMGLRKKAHEISVLCDAQVALLVFNTKGRLYEFSSESSIENVLERYERHTQAVQLV GADKEQPRNWSSECFKLTGRVEVLEKSIRNIAGHDLDPLNLRELQGLEHQLDTALRRIRTRKNTVMNESISELQKKFISR KWILFRLQRNHLHAFCNLSQAKALQEQNNVLAKKIKDQQKTMAEPLHPPLQKHLAKILQVSTWALQSNTRHKD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 60 | 60 | 1.5E-33 | ||
| ProSiteProfiles | 1 | 61 | 61 | 30.74 | ||
| SUPERFAMILY | 2 | 76 | 75 | 1.57E-29 | ||
| CDD | 2 | 76 | 75 | 1.49651E-36 | ||
| PANTHER | 2 | 156 | 155 | 4.1E-83 | – | |
| PANTHER | 2 | 156 | 155 | 4.1E-83 | – | |
| ProSitePatterns | 3 | 57 | 55 | - | ||
| PRINTS | 3 | 23 | 21 | 3.2E-28 | ||
| Pfam | 11 | 57 | 47 | 5.8E-23 | ||
| Gene3D | 13 | 78 | 66 | 6.6E-26 | ||
| PRINTS | 23 | 38 | 16 | 3.2E-28 | ||
| PRINTS | 38 | 59 | 22 | 3.2E-28 | ||
| Pfam | 85 | 157 | 73 | 5.9E-20 | ||
| ProSiteProfiles | 87 | 201 | 115 | 13.589 | ||
| Coils | 181 | 201 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA polymerase II regulatory region sequence-specific DNA binding | Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Biological process | Positive regulation of transcription by RNA polymerase II | Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi2g1v0270500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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