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LotjaGi2g1v0292100.2

Overview

Field Value
Gene ID LotjaGi2g1v0292100
Transcript ID LotjaGi2g1v0292100.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Carboxyl methyltransferase; TAIR: AT4G36470.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9SPV4|SAMT_CLABR Salicylate carboxymethyltransferase; TrEMBL-Plants: tr|I1JEI1|I1JEI1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0292100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:76640082..76641663) extracted from Lotus japonicus Gifu genome v1.2.

ATGGATGTAGAGAATGTCTTCCACATGACTGGAGGAGTTGGCAAAACTAGCTATGCAAAGAATTCCTCATTACAGGTTCA ATTCTTTCTCTCAACCATAGTTTCCTTGTTTTGGTTTAAAATTGAAATTTTACTTCCTTCTAATCATGTTTATCTCTTTA TTCTGATTTTGACAGAAGAAGGAATCTGATAAGGTGAAACACATAATCATACAAACAGTTGAGGAGCTTTACCTTGCAAC CACTCCCAAGAGCATAGGCATTGCTGATTTGGGTTGCTCCTCTGGACCCAATACTCTTTCAATCATCAAAGACATCTTTC AAACCATCCAAAACACAAGTCAAAATATCATGCATCACTCTGAAGAGCTTCGTGTATACCTCAATGATCTTCCAACCAAT GACTTTAATTCAATTTTCAAGGCCTTGCCTGAGTTTCAGAGGTTGCTTAGGCAGGACAGGAAAGATAATGGGGTTCCTTC CATTTTCATGGGAGGTTACCCTGGTTCATTTTATGGAAGACTATTCCCAAACAATTACTTGCACTTTGTCCACTCCTCCT ACAGTTTACACTGGCTTTCAAAGGTAATGTTACTACATTTCTTGTTTTTTCACACAAATGTCACTTGCACACTCCATTTT CTTCTGCACTATCCCTGCTTCTAGACTCCGTTTGGAAGAACTTATTTGAGCTTATCTCATAGTATAAGTGTTTATGTTAG TGTTTGAGATAGTAACCTGTTTAGAAGAGCTTATGTGAACTTATCTTATAGCATAAACTCTATGCAAATGTTTGAGAGAG CTTATGTAAATAGCTTCATGACTATCTATAAGAAGTTCTCAACATATTTTAATAAGATATTCACATTAGTTTATAAATAA GAGCTTAAGCTTACATGTAGCATATTTTCAGCTTATTTCATAAGTTTCTCAAATAAGCTTATGAATAAGCGCTTATGTGA TAAGGCTTAATTAAGTTGTTTCCCCAAACACGCACAAGTGTGAATAGTTTATTACCTATCTATACATTGTTTTGAATTTA TTTTCATAAGTTGTTCAAATTAGACTGAATAAGAGCTTAACATGTAACTTAATTTCAGCTTATTTCAATAATCTTCTCAA ATTAGATTATGTATAAGCACTTATAGTCATAAACGCTTAATTAAGTTGTTTAACCAAATGCACCCTTAACTGTAGATATT GGTGGTTTATTTCATGCAGGTTCCTCCAGCACTTTATGATGAGGAGAAAAGGCCTTTGAACAAGGGATGTGTTTACATTT GTGAATCAAGCCCTGAAGTGGTACCCCAAGCATACTATGAGCAATTTCAGGAAGATTTTTCCTTGTTCCTCCGGTCGAGG TCAGAGGAATTAGTTGTGGGTGGAAGGATGGTGCTGATTTTTCTTGGAAGAAGAGGGCCAGAACATGTTGACAGAGGCAA CTCTTTCTTCTGGGAGATTCTCACCCGGTCATTTGCTATTTTAGTCTCACAGGTACATTGCTAGAGGACATGTTATTGTT GTTACTTCTGTTTTTGTTATAAATAATAACAAGTTGGAATTCAGCACTGAAAGGTAAATTGA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0292100.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATGTAGAGAATGTCTTCCACATGACTGGAGGAGTTGGCAAAACTAGCTATGCAAAGAATTCCTCATTACAGAAGAA GGAATCTGATAAGGTGAAACACATAATCATACAAACAGTTGAGGAGCTTTACCTTGCAACCACTCCCAAGAGCATAGGCA TTGCTGATTTGGGTTGCTCCTCTGGACCCAATACTCTTTCAATCATCAAAGACATCTTTCAAACCATCCAAAACACAAGT CAAAATATCATGCATCACTCTGAAGAGCTTCGTGTATACCTCAATGATCTTCCAACCAATGACTTTAATTCAATTTTCAA GGCCTTGCCTGAGTTTCAGAGGTTGCTTAGGCAGGACAGGAAAGATAATGGGGTTCCTTCCATTTTCATGGGAGGTTACC CTGGTTCATTTTATGGAAGACTATTCCCAAACAATTACTTGCACTTTGTCCACTCCTCCTACAGTTTACACTGGCTTTCA AAGGTTCCTCCAGCACTTTATGATGAGGAGAAAAGGCCTTTGAACAAGGGATGTGTTTACATTTGTGAATCAAGCCCTGA AGTGGTACCCCAAGCATACTATGAGCAATTTCAGGAAGATTTTTCCTTGTTCCTCCGGTCGAGGTCAGAGGAATTAGTTG TGGGTGGAAGGATGGTGCTGATTTTTCTTGGAAGAAGAGGGCCAGAACATGTTGACAGAGGCAACTCTTTCTTCTGGGAG ATTCTCACCCGGTCATTTGCTATTTTAGTCTCACAGGTACATTGCTAG
Download CDS Sequence

Protein sequence (LotjaGi2g1v0292100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDVENVFHMTGGVGKTSYAKNSSLQKKESDKVKHIIIQTVEELYLATTPKSIGIADLGCSSGPNTLSIIKDIFQTIQNTS QNIMHHSEELRVYLNDLPTNDFNSIFKALPEFQRLLRQDRKDNGVPSIFMGGYPGSFYGRLFPNNYLHFVHSSYSLHWLS KVPPALYDEEKRPLNKGCVYICESSPEVVPQAYYEQFQEDFSLFLRSRSEELVVGGRMVLIFLGRRGPEHVDRGNSFFWE ILTRSFAILVSQVHC
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF53335
1 252 252 1.05E-83
IPR029063
PANTHER
PTHR31009:SF6
2 252 251 9.1E-126 –
PANTHER
PTHR31009
2 252 251 9.1E-126
IPR005299
Gene3D
G3DSA:1.10.1200.270
6 252 247 3.3E-90
IPR042086
Gene3D
G3DSA:3.40.50.150
21 226 206 3.3E-90 –
Pfam
PF03492
39 252 214 1.3E-83
IPR005299

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008168
Molecular function Methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0292100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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