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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0416100 |
| Transcript ID | LotjaGi2g1v0416100.3 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peroxidase; TAIR: AT2G35380.1 Peroxidase superfamily protein; Swiss-Prot: sp|Q9SLH7|PER20_ARATH Peroxidase 20; TrEMBL-Plants: tr|A0A151TJ00|A0A151TJ00_CAJCA Peroxidase; Found in the gene: LotjaGi2g1v0416100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:91377995..91380669) extracted from Lotus japonicus Gifu genome v1.2.
ATATGAGTCAATGTGAATCAAGCTAAGTTAAATAATTGGTAGAAAGAGTTTAGCGACCCATAAGTCTTAGCTCAAACAAA AAAGATAAAAACATATAAGCCATTGACCTAGTATTTATATCATGATGTCACAAGATAAAACATATATGCCATAAACCTAG TATTTATATCATGATGTCACTTTTTCTGCCAAGTAGCACTTCACAAGAATCCCCTCATTATTTAACTAAAGCCAGTACCA AAAGGAAGAATTTATCTCCAGAACAGAATTAAAAAAACAACAGGTCAAGTTAGTTGCATCAACTCTTGGTGAAAACCACA AGCACCTGAGAAAATTCTCTACAACAAGGTTGGTTTGACAATGTAGAAAGAAACACCAACAAACGATACATGAAAACATC TTTATCAAGAATTTCATTCCTTTCATTCTATGCACATTGAGCTTAAGACTAATACAGCATCCCCTCTCCCTTTCTTCATC ATTTCCTTTAATGGAGCGTCTAGGACTCTTGCTGATCTTGATTACTATTCTGTTCAATACTCAAACTCTGAGTGGCAATG AACTTCTTATTCATGATTACTACAAGGAGAAATGCCCCTTAGCTGAAGAAATTGTGAGACATAATGTGGGGGTAGCACTC CTAAAAGATCCACGTTTAGCAGCCTCGCTACTTCGCTTACATTTCCATGATTGTTTTGTCCTGGTAACCATTTTATGCAT TTTTCCTTCTTCCCATTTTTCATGGCCCATGATTCTCTTGGTCGTTTAAGCTTCTATTTCTCTGATTGTTGGTTGTTGAA AATAAGGGATGTGATGCATCTGTACTTCTAGACAGCGTTGAGGGCATGCCAAGTGAAAAGCAAGCAGGACCAAATCTGAA CTCTTTACGTGGATTTGAAGTTATAGACAAGATAAAGTATCTGCTGGAAGAGGAATGTCCTTACACAGTTTCATGTGCAG ACATCCTTGCCATGGTTGCTCGTGATGCTGTTGAACTGGTATTGGTATACACATCTAATTCAATTGCATCAATGAGTCAC GTAACAAAACAAGTGCATGTTTGATTACACAGAAAAAACCAAAAGCTCAGGGAATTGTTTCTGTTTAATTAGATTTTGGC TGAACATGGTTTTTGTGTATGCAAACATGTACAATATCCCTTTTGAGGCAACAAGTAATTGGGATGTTGAAAATTAAAAT GTGTCTATGTCAGAATGACATGGTCAAATAAATGTTCTTCACTATTTTCACTTTCTTTGTAACAATTGATGTTGTCTGTT TTGAAGAGAGGAGGACCAAGGTGGGAAGTATGGCTTGGGAGGAAGGACTCTCTAGAATCAAGTTTCAGTGGTGCTAATCT ATTCATCCCTGCCCCAAATTCCTCTTTGGAGACTCTCATCAATAATTTTAAGCAACAGGGTCTTGACATAGAAGACTTGG TGGCTCTATCAGGTATACATTACTGTTTATTCATGCTATGTTGAACCAATTAACATTTCAGAGAATCAGAAAAGAACTTA TAATCATGTAGAGCTCCTACTTAACAAAAAACAGGTAGTCATACTATAGGAAGAGCAAGATGCACAAGCTTTAGGCAGAG GATATATGAGCCAAAGCAGGAATATCACTACGGCTATGATCGTTACAAACGATACACAAACTTCAGAAGAATCCTAGGGT CCATATGCCCTGTCACAGGAAGGGACAACAAATTTGCACCCTTGGATTTCCAAACCCCGAAAAGGTTCGATAACCACTAC TTCATAAACATTCTTGAAGGAAAGGGCTTGTTGGGCTCTGACAATGTTTTGATCAGCCAAGACTTGGATGGAAAGATCAC AGAGCAGGTGTGGGCTTATGCCTCCAATGAAAAGCTTTTCTTTGCTTCATTTGCTAAATCTATGATGAAGATGGGAAACA TCAATGTTCTCACAGGAAATGAGGGAGAAATAAGGAGGAATTGTAGGTTTGTCAATGCTTAGTTGTTAATGCAATGAATG TATCTGCATGTGGTTTGCAATGAAAACTTGTTAAAACCTAATATTTTATCACTGTATGGAGAGAATAATTATCTATATAT GCATGCATAGATATAGACTAAAAACTATCCATTTCACTAAACAAAAAATATGAACCATAAAGGCATCAGTTCTCCAAGGT GAATAAAGCATCAATGAATTTCAGACGCAAATTACCCATTAGTTAAAATGAGATTCATCACATGCCCATTATGTGTTCAA TTTCTAAAGACAAAAAACAATGTACGCTAAAAATGTTTGAGCTAAAACAAAAGACCAAAGAGGGAATGAAGTAGCGATCA GAACCTGTCGGGATTCATGAATACATCACGATAGTATCAGTGAATTGACATACCATTGAAGTGATATCGTCACCTCGCTT TTCCCTCTAAACCAAACCCTAATACAAATAAATGATTTTCATTAACCCAAGTTCGGCACTATAGTAAATTTAATAGAAGA AAAAAAAGAGAGGAGAAATTGAAAAAGTTTTCCATGAATGATTCAAAATCAGAGAAAATAAACACGAAAACCCTAAAGAT GTTACCCGCTAAACAGTTGCGTAGAGAATGAGGAAGAAGCTGGTCACAATTTATAGATGAAGATTAGGGTTTCATGTAAT CGAAGAGTGAATTGGATCTTGGGTCGGAATTCAAT
CDS sequence (LotjaGi2g1v0416100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGTCTGTTTTGAAGAGAGGAGGACCAAGGTGGGAAGTATGGCTTGGGAGGAAGGACTCTCTAGAATCAAGTTTCAG TGGTGCTAATCTATTCATCCCTGCCCCAAATTCCTCTTTGGAGACTCTCATCAATAATTTTAAGCAACAGGGTCTTGACA TAGAAGACTTGGTGGCTCTATCAGGTAGTCATACTATAGGAAGAGCAAGATGCACAAGCTTTAGGCAGAGGATATATGAG CCAAAGCAGGAATATCACTACGGCTATGATCGTTACAAACGATACACAAACTTCAGAAGAATCCTAGGGTCCATATGCCC TGTCACAGGAAGGGACAACAAATTTGCACCCTTGGATTTCCAAACCCCGAAAAGGTTCGATAACCACTACTTCATAAACA TTCTTGAAGGAAAGGGCTTGTTGGGCTCTGACAATGTTTTGATCAGCCAAGACTTGGATGGAAAGATCACAGAGCAGGTG TGGGCTTATGCCTCCAATGAAAAGCTTTTCTTTGCTTCATTTGCTAAATCTATGATGAAGATGGGAAACATCAATGTTCT CACAGGAAATGAGGGAGAAATAAGGAGGAATTGTAGGTTTGTCAATGCTTAG
Protein sequence (LotjaGi2g1v0416100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSVLKRGGPRWEVWLGRKDSLESSFSGANLFIPAPNSSLETLINNFKQQGLDIEDLVALSGSHTIGRARCTSFRQRIYE PKQEYHYGYDRYKRYTNFRRILGSICPVTGRDNKFAPLDFQTPKRFDNHYFINILEGKGLLGSDNVLISQDLDGKITEQV WAYASNEKLFFASFAKSMMKMGNINVLTGNEGEIRRNCRFVNA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 202 | 202 | 41.411 | ||
| PANTHER | 3 | 202 | 200 | 8.4E-112 | – | |
| PANTHER | 3 | 202 | 200 | 8.4E-112 | – | |
| SUPERFAMILY | 3 | 202 | 200 | 2.06E-58 | ||
| Gene3D | 4 | 202 | 199 | 1.2E-60 | – | |
| Pfam | 4 | 161 | 158 | 1.4E-34 | ||
| PRINTS | 8 | 23 | 16 | 9.9E-31 | ||
| PRINTS | 8 | 20 | 13 | 1.1E-16 | ||
| Gene3D | 34 | 182 | 149 | 1.2E-60 | – | |
| PRINTS | 55 | 67 | 13 | 9.9E-31 | ||
| PRINTS | 56 | 71 | 16 | 1.1E-16 | ||
| ProSitePatterns | 56 | 66 | 11 | - | ||
| PRINTS | 117 | 132 | 16 | 9.9E-31 | ||
| PRINTS | 119 | 134 | 16 | 1.1E-16 | ||
| PRINTS | 133 | 150 | 18 | 9.9E-31 | ||
| PRINTS | 176 | 189 | 14 | 9.9E-31 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Biological process | Response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi2g1v0416100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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