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LotjaGi2g1v0453000.6

Overview

Field Value
Gene ID LotjaGi2g1v0453000
Transcript ID LotjaGi2g1v0453000.6
Related isoforms 8
Lotus japonicus genome version Gifu v1.2
Description 12-oxophytodienoate reductase; TAIR: AT1G76690.1 12-oxophytodienoate reductase 2; Swiss-Prot: sp|Q8GYB8|OPR2_ARATH 12-oxophytodienoate reductase 2; TrEMBL-Plants: tr|I3T1Y1|I3T1Y1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0453000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:94622515..94625146) extracted from Lotus japonicus Gifu genome v1.2.

GTGGGACATGAAATGAAATGACAAATATAAATGGAAAAGGAGGGTGGAAGGATTAGTGGAGAGGAACAATGAAAGTGAAA AGTGGGAGGGATCATGGATAGTGAAAGTGAATCTATCTTCACTTTCAATCATGTTCCTCTCTCTGTTTGTTCCTTTGTTT TAGGGTGATTGATTCATTAATGGCTGCTATGCCATAGTCAAAGAAGCCGACTATGCAACGCAATGGCAAACGTCACATGA CACGCCCACTCCACTTGACTGTCACTACTCTCATGCGGTGCCAGTTGCAGATGCTGCTTCTTTCTTCTATAAATTCATCC AATACCAAGCCCCAAGGGAACACAACAATACATTATCACCCACTTCAATTCAGTTCAATTCGATTCAATTCTCTCTAACT CACTTACTTGTTAACCGCACCAATGGCTCAGCAATTGGATCCCAGTAATCCTCTACTCACTCCATACAAGAGGGGTAACT TCAATCTCTCCCACAGGTACTTGCTTATTGTCATTCATTTTATGCACCTTTGGAAACTCCGACGCCATAGTCAAAACTAT GGAGACTTCAAATTTAGAATGATACCATGATTTTGACTTCAGCGCCTTTTTTCGAATGAGTTTCCAAACACGCACACGCC GTTTTTTTTTGTTTTCCTCTTTTTTTCTCCATCATACTAATTACTTTCATTGCTTCTCCATCTATATCTATAATTTCAGA GTTGTTTTGGCGCCGCTTACCAGACAGAGATCCTACAACAACGTTCCTCAGCCCCATGCTATCCTCTATTACTCTCAAAG AGCTTCCCAAGGAGGTTTCCTCATCACTGAAGCCACCGGTGCCTCCGACACCGCTCAAGGCTATCCAGACACGCCTGGCA TTTGGACAAAGGAACAAGTTGAAGCGTGGAAACCAATTGTGGATGCTGTTCATGCCAAAGGTGCTACATTCTTCTGTCAG ATTTGGCATGTTGGAAGGGCTTCATCTTCAGGTATATATTTCCTGCACTTGCTTTATTCATATTCTAATGCAAATACCTA TAAATTTCAACATGCTTCACTAGACAATAACATAGTTTAATTTACATAGATAAGGAATTTCTGTTTAATTGAACCTCTTA TGCATATTTTCTAATTGCCTTTGTTGTTGTTAATCTGTCCCTAACATTTTTCTTTTACACCACTTGGTCTACCATCACTG ACAGTAACATAGAGATTATTGGAGTTGCAGTCTTTTGCTAGTCATTATTACTAAGGGAAAAATACATTCTTTTTGTTTTA GTAATGTTATTTATGACCATCATGTAAATGCTTACCATATGCCTATTTTCCGTGTAATTTTGAACAGTTTATCAGCCAAA CGGGCAAGCACCAGTATCTTCTACAGACAAGCCACTTACACCAACAATTAGAGCTAATGGCGTTGATGTAGCAGATTTCA CGCAACCAAGGCGGCTAAGGACAGATGAAATTCCTCAAATTGTCAATGATTTCAAACTTGCCGCAAGGAATGCTATTGAA GCTGGTAACTTAATTGATCTTTATAACAAATGTCCCCAACATTCAACATGTTTCAATCATGATACAATATGTTTTTAGAA ACTAGACTGTTTAACAAATGTCCCCAACATTCAATCATGCTTCAATCTGTTGTGGTGCAAATTGTAGGTTTTGATGGAAT TGAGATCCATGGAGCTCATGGCTACCTGCTTGAGCAATTTATGAAAGATAAAGTGAACGACCGAACTGATGAATATGGTG GTTCCCTTGAGAACCGCTGTCGATTTCCTTTAGAGATTGTTGAAGCTGTTGCAAATGAGATAGGGGCAGAAAGAGTTGGA ATTAGATTATCACCTTTTGGAGAGCATGGAGAATGTGTTGACTCAAATCCCAAAGAGTTGGCACTTTATATGGTTAATGC GCTAAATAAATACAGTGTTTTGTACTGTCACATGGTAGAACCAAGAATTAAAAATAATGCAGAACAGGTTGAAAGCTCTC ATAGCCTGGTACCAATGAGAAAAGCCTTCAAGGGCACTTTTATAGTTTCTGGAGGCTATATTCGACAAGAAGGGATCAAT GCTATAGCTGAAAACAGGGCAGATCTTATTGCTTATGGTCGTTGGTTCTTAGCTAATCCAGATTTACCAAAGAGATTCGC GCTTGATGCTCCTCTCAACAAGTATAATCGGGAGACTTTCTACACTTCTGATCCGGTTATTGGTTACACTGACTATCCAT TTCTTGAATGAAGAAACCAATGCTGTTGCATACAAGGGTGGAACCTCTTGATTTAATAAGCTATTCTTCACTTGCACATC CCTTTCTTGCAATTTGGTTGGTCATTGTACTAGGAGTTATGATCCTTGAATTTTAATTAATAATGGAAGCAGATCGCATG TAAAACTATGATTTGTGTGTGATAATGACACTGAATGCTAATGGGAAGTATTGGGCTAAAGTTAAGTACCTGATTTGCAG TACTAGGGGCATGTTTGGTTGCAATTTTTGTTTTCAGTTTTTAAAACAACTTTCATAAACCATTTTTAAAAACAGTTTTC AGATGAAGAAAACAAGTTGAATGACATGTTTTCCAACATTTAGAAAACTTATATCTGAAAACTAAAAACTGA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0453000.6) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTCAGCAATTGGATCCCAGTAATCCTCTACTCACTCCATACAAGAGGGGTAACTTCAATCTCTCCCACAGAGTTGT TTTGGCGCCGCTTACCAGACAGAGATCCTACAACAACGTTCCTCAGCCCCATGCTATCCTCTATTACTCTCAAAGAGCTT CCCAAGGAGGTTTCCTCATCACTGAAGCCACCGGTGCCTCCGACACCGCTCAAGGCTATCCAGACACGCCTGGCATTTGG ACAAAGGAACAAGTTGAAGCGTGGAAACCAATTGTGGATGCTGTTCATGCCAAAGGTGCTACATTCTTCTGTCAGATTTG GCATGTTGGAAGGGCTTCATCTTCAGTTTATCAGCCAAACGGGCAAGCACCAGTATCTTCTACAGACAAGCCACTTACAC CAACAATTAGAGCTAATGGCGTTGATGTAGCAGATTTCACGCAACCAAGGCGGCTAAGGACAGATGAAATTCCTCAAATT GTCAATGATTTCAAACTTGCCGCAAGGAATGCTATTGAAGCTGGTTTTGATGGAATTGAGATCCATGGAGCTCATGGCTA CCTGCTTGAGCAATTTATGAAAGATAAAGTGAACGACCGAACTGATGAATATGGTGGTTCCCTTGAGAACCGCTGTCGAT TTCCTTTAGAGATTGTTGAAGCTGTTGCAAATGAGATAGGGGCAGAAAGAGTTGGAATTAGATTATCACCTTTTGGAGAG CATGGAGAATGTGTTGACTCAAATCCCAAAGAGTTGGCACTTTATATGGTTAATGCGCTAAATAAATACAGTGTTTTGTA CTGTCACATGGTAGAACCAAGAATTAAAAATAATGCAGAACAGGTTGAAAGCTCTCATAGCCTGGTACCAATGAGAAAAG CCTTCAAGGGCACTTTTATAGTTTCTGGAGGCTATATTCGACAAGAAGGGATCAATGCTATAGCTGAAAACAGGGCAGAT CTTATTGCTTATGGTCGTTGGTTCTTAGCTAATCCAGATTTACCAAAGAGATTCGCGCTTGATGCTCCTCTCAACAAGTA TAATCGGGAGACTTTCTACACTTCTGATCCGGTTATTGGTTACACTGACTATCCATTTCTTGAATGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0453000.6) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAQQLDPSNPLLTPYKRGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRASQGGFLITEATGASDTAQGYPDTPGIW TKEQVEAWKPIVDAVHAKGATFFCQIWHVGRASSSVYQPNGQAPVSSTDKPLTPTIRANGVDVADFTQPRRLRTDEIPQI VNDFKLAARNAIEAGFDGIEIHGAHGYLLEQFMKDKVNDRTDEYGGSLENRCRFPLEIVEAVANEIGAERVGIRLSPFGE HGECVDSNPKELALYMVNALNKYSVLYCHMVEPRIKNNAEQVESSHSLVPMRKAFKGTFIVSGGYIRQEGINAIAENRAD LIAYGRWFLANPDLPKRFALDAPLNKYNRETFYTSDPVIGYTDYPFLE
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.20.20.70
3 368 366 2.5E-140
IPR013785
PANTHER
PTHR22893
8 368 361 4.3E-210 –
SUPERFAMILY
SSF51395
8 367 360 3.97E-123 –
PANTHER
PTHR22893:SF102
8 368 361 4.3E-210 –
CDD
cd02933
10 349 340 0.0 –
Pfam
PF00724
11 343 333 1.8E-88
IPR001155

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0010181
Molecular function FMN binding Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
Subterm of
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0453000.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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