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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0026000 |
| Transcript ID | LotjaGi3g1v0026000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | EID1-like F-box protein 2; TAIR: AT5G15440.1 EID1-like 1; Swiss-Prot: sp|Q9LF38|EDL1_ARATH EID1-like F-box protein 1; TrEMBL-Plants: tr|I3SF25|I3SF25_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0026000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:2816209..2819269) extracted from Lotus japonicus Gifu genome v1.2.
AATCAACTAACCTGAAACTAAAATTATTTTAGCTTAAGTAGAAAGTTGGAATTTGGATTCGAGTCACTATCACTGCACTT TCATTAAATAGATAGGAAAAAAATAGTAATATAAGCATAAACTAAAATTGATGAAAGCTGCACATTCTGCAGAAAACTCA ATTCTTCTTCTTACTATCATCTCCTTTCCCATTTCTTGCATTTGCTACCAGTGACTGCTGATTTCAGAGAACCCTTCCCT GCTTAGATTACAGGTAAATCAAACTTCAGAAGCACTTGCTTCTCTCTCTCTCTCTCTCTCTCTCTGATTTTGTTGACTAT TTGCGGAACCCTAATCTGTGTTTTCCATTAGCAAAATGCAGAATTGGGCTTATCTAGGGTTTGGTGGCTATGCTGGAAGC GGGTTAAACAAGCTGGGGCTAAGGTCAGTGAATAATTGAATTTGTATTTTATTGATTTCTGTAAGTTTCAATTTTCAAGT TCCTATGAATGATCCATTTCCACGCCCAATTTCGTTACATGCGATTTTGATCTCATTTGAGTCGAGGGTTTTCTTAAAGT TATCATTTTGGATGTGGGTTCTGTTGAATATTCAACTGGGTGTCGATTCGGAACTTGTTTGTGTTGACTTGCTCTGCATT TTATGGGTGTGTCTGAGAATTTCTGTCTATTTGAAATTTTGGGAGTGGGTGGTTACAGGCAATTAGGAAAATGCATTGCA AGTTTTTTTTTCTTGTTTTTGGTGTTTCTGCAATGTGGTTGGAGATTTTGTCATTGAAGATTGCAGTGTTATCAAATATC CGCCAAGGCGGTTTCTCATGGCGGTTTTTTTGCTTTCTGCCATGGCCGGTATCCCGCGGGCTTTCCGCCATGACCTGCCA TCTGCAATTAGCAACACTTGAAGTTTGTGATTCGCCTCTCATGGCTGAGTGATGTGCTTTTTAATAGTTCATTTAGTTAT CCTCTTTGTGTTTGTGGCATATTGGTATGACCCATATATGGCTTCTTTATTGATGAGTTCTGGTTTATATTACTGGAGAA AGCTGGAAGTGAATCGTTATGAATTCAACACCGCTGGAATTTGTGACATTGTTGTAGCTTCCCACTTCTAAGGCTCTTTC CCTTTATCTGGAACTTGTCTAGCATATGAGTTCTCTTATAAGCATAATTTCAATATGTTTTGCTGTGATGTCTTGTTGTC TGTGTACATTGTTCCAACTCACCAACTGTGTTAGGTTCCTCTACCCTTCATTTTTGGTTTGGGGAGAGTAGGAGAGAGAG ATGATATTGTATGAATTGTAAGACTAGATAGTAAATATGAAGTAACAGTACGCTGGAAGTCAATGACATGCCTGTTCACC AGAAGGAGAAGAAAGAATCTTATTTTCTTTTCTTGAACTAACATATGAGTACTTTAGAAATCAACTTGATCTTATGAATT ATTCTGCATAGTATAGGTTTCATCAGTTGTCTTATGTTTCATGTTCACCATGTGGTAATATTTAATTAAGAAATCTGGTG TTTAGGTTTTGTCAAGTTTATTAATACTGTGAAATATTCCAGCTAAGGGTTGTCATGCACTTGTGATTTTTCTTTCAGGT TTACCAGGTGAAGAAAATGATTATCACAAAGCAGTACCGATGCATTCACTCATCTAGCTGTCAATGCACTAAAGGGCATT TAAGTGAAGAAGTAATATTCTTAGTATTTCATCATTTGAAATGGAACCCCAAGCTAATTGCTGCTCTGTCATGTGTGTGC AAATGGTTTGATGATTTCGCCAAGCGAGTTCTATGGAAAGAGTTTTGTCGAACAAGAGCTCCAAAAATGATGCTTGATCT GCAATCTAGTGGTAGTCACAGCGTTGATGGGAACTGGAGAGCCCTAGGGAAGCTTCTCATATACTGTTCGGGATGCACGA AAGGCGGCTTGTTCAATAGGATTCATATCCCTGGTCACTTTGTTTATCAGACTCGATTTTCCAGAACATCAGGAAGGAGT TTTCTTCTGCCACAGTGTAGAACCGATGTTTTATATGTGTGTGATCCTTGTGAGCATCTTGACCAAGGTGAAGAAGGAGA TGTAGGGTTCTTCCGTGGCGTGTTTAAGTCATTTGCAACTTCAAAGGTGAGGAAGATGCTTATTAACAGAAGGGCCAAGC TCCATCAAACAGAAGTTTGCCCTTATTGTAAGGCAAAGTTGTGGAGCATGCTGCAAGCTAAAATGATCCCTGAAAGTGCT AGTTGCAGGTTGGGTTCCTATGAAGATTGTCTTGAGTATTATGTATGCCTAAATGGTCACTTGCTTGGGATCTGTACACT GTTACCATTGTCTGATTCTGAAGATGCATCTGAGTTGGAGAAATGTAAATGATTCTCTTGTATCTGGAAAACCATAGCTC TATCCTGTTTCTTTATTTATTTTTCCTTTTTCATTTCAAGACGAAATGAAAATTTATGCTGGATATCTGTTTGTGCATTA TAATTTTGATGTCACCTTTTATAATTGAGAAGCTAAATTGATGGTAATTAATATTTTAGTGATTAATAGTGAGAGGACAA CATAAACCTCTAAATTAGAGAGATTTCTCAAAATGCAAGGCCAGGGTAATCATTAGAAATTATGTAGCTTCTCCAACTAA CTGAAAAAACTTAAATTGGAAAAAAGAGATATCATATCTATTTCAAGGGGTACCTCGGAACAAAACACAGCCCCTTGTAT GTGGCACTTGCACAAAAAATCAATGCCTTTGAATGTATTATAAATCTATCAAAAGTCACATGCCCCTAGTAGACACCATC ACCATCCTCCAACAGAAGAGTTTTCACCTACTCATATTTTGATGGACTAGCAGTATACTCAGTTCCTTTGTTGGATGAAA ATGCATCAGATGAAGTACTAGATGATATAGCACTACCAGCAGTAGTAACATTGCTATTGCTTTGTGATGGATTTCTCCGA GGATTGTTAGTTGCAGGGCTCTGTCCCGCCTCTGATAGTTTTCTGATAAGGTTCATGATAGTTGGAAAAAACTTGCTAGA CAAGGATAAGATTCCCGGAAG
CDS sequence (LotjaGi3g1v0026000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTATCACAAAGCAGTACCGATGCATTCACTCATCTAGCTGTCAATGCACTAAAGGGCATTTAAGTGAAGAAGTAAT ATTCTTAGTATTTCATCATTTGAAATGGAACCCCAAGCTAATTGCTGCTCTGTCATGTGTGTGCAAATGGTTTGATGATT TCGCCAAGCGAGTTCTATGGAAAGAGTTTTGTCGAACAAGAGCTCCAAAAATGATGCTTGATCTGCAATCTAGTGGTAGT CACAGCGTTGATGGGAACTGGAGAGCCCTAGGGAAGCTTCTCATATACTGTTCGGGATGCACGAAAGGCGGCTTGTTCAA TAGGATTCATATCCCTGGTCACTTTGTTTATCAGACTCGATTTTCCAGAACATCAGGAAGGAGTTTTCTTCTGCCACAGT GTAGAACCGATGTTTTATATGTGTGTGATCCTTGTGAGCATCTTGACCAAGGTGAAGAAGGAGATGTAGGGTTCTTCCGT GGCGTGTTTAAGTCATTTGCAACTTCAAAGGTGAGGAAGATGCTTATTAACAGAAGGGCCAAGCTCCATCAAACAGAAGT TTGCCCTTATTGTAAGGCAAAGTTGTGGAGCATGCTGCAAGCTAAAATGATCCCTGAAAGTGCTAGTTGCAGGTTGGGTT CCTATGAAGATTGTCTTGAGTATTATGTATGCCTAAATGGTCACTTGCTTGGGATCTGTACACTGTTACCATTGTCTGAT TCTGAAGATGCATCTGAGTTGGAGAAATGTAAATGA
Protein sequence (LotjaGi3g1v0026000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIITKQYRCIHSSSCQCTKGHLSEEVIFLVFHHLKWNPKLIAALSCVCKWFDDFAKRVLWKEFCRTRAPKMMLDLQSSGS HSVDGNWRALGKLLIYCSGCTKGGLFNRIHIPGHFVYQTRFSRTSGRSFLLPQCRTDVLYVCDPCEHLDQGEEGDVGFFR GVFKSFATSKVRKMLINRRAKLHQTEVCPYCKAKLWSMLQAKMIPESASCRLGSYEDCLEYYVCLNGHLLGICTLLPLSD SEDASELEKCK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 247 | 247 | 1.6E-159 | – | |
| PANTHER | 1 | 247 | 247 | 1.6E-159 | ||
| SUPERFAMILY | 13 | 87 | 75 | 8.18E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0026000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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