Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0128800 |
| Transcript ID | LotjaGi3g1v0128800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF936 family protein; TAIR: AT2G31920.1 elongation factor 1-delta, putative (DUF936); Swiss-Prot: sp|Q9TSZ3|KCNH2_CANLF Potassium voltage-gated channel subfamily H member 2; TrEMBL-Plants: tr|K7L711|K7L711_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0128800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:15842911..15849338) extracted from Lotus japonicus Gifu genome v1.2.
TTTTGTTGGATAATTTACTTTTTGGCAAAAAAATACAAATTTCAATTCTGTCTGTTACAACAGAGAGAGAAGCCATTAGA AAGAGTAAACAGAGCACAGTACAAACTACAAAGGTCTCGTTCACTGTGCTTCCTCACTACTCACTTGCACTGCCATGGCG TCTCTGACCCCTGGCGTGCTCTCAAAACTTCTCCAAAACGCCGGCAACAAGGTCACCGGCGAGCACCGCCAAGCCCTCCT CCAAGTCACAGAAATCGTCCCTCGCCTCTCCGACGACACATGGCAACCCAGCACCACCGGCGGCGGCTACTTCCTCAAAC TCTCCGACTCCCTCCACGCCGCCTACGTCTCCGTCTCCGACCACGACTCCGACCTCATCCGCTCCGACAAACTCCGACTC GGCCAGTTCGTCTACGTCACTCACCTCGACTCCGACTCCGACTCCGACTCAGCTTCCCCTATCCCACTCGTTCGTGGACT CAACCCGCTTCCGAAGCGACGACCCTGTGTTGGAAACCCCACTGACTTGGTTTCTAGCCTCGCTCTTCCTTCAACTCCCA AGCTTCATTTCAGAAAACCCAACAACAAAAACAATGGTTCAGGTTCTTCTGCTTCCGTTGTGAAGGTGAAAAAATCGTCG CCATTGAAGGTGGAAGAAGCGAGAAGGTTGAGTTTGGATTCTGCTAGAAGGGTTTGGGATGCTGGGAAAACTTCACCTGC TGCAACGAGTTCTAGTTCCAGATTCAAGTTCAAATCAAACCCCACTTCACCTAATGTGCGTTTTGTTCACTGTTTTTTCT TACTTTTGGAATTTCACTTTGTTTGCAAGGTGTTTGTTTTTATTCCTTTGTAACTTTGGTTTTTTATACATAGCTCAGTT GGCAACGTAGGCCGAGTGTGCGGGAAGAGCTCTCGGGTTCGATCCCCACACAATACACTATGGGGAAGGGATGGGGAGCT TAACTGTGACTAAATCTTGAATTTGACGGCATCCAAAGGGTGACCGGGTACCGGATGTGTATATAAAAAACTAATCTATT TATTGAAATGTCTTTTAATTAATTAATTACAACTAGTAGAGTAGTAGAGACAAATCTTGGTTTTTTTCTTATTTTCACTG TTGGGAGCAACTGGGTTGCAGTTATTTTTAGGTAAAATTTGTGGATGGAAGCACAGTTTCTGTTGAATGAGGGCCCTCAC TCACTTTCAATTTTTGGCATTTTGAAATTATTTTGTTATGTGTGTAGGACCAGGTCAACCCTGCAACTTTTTTCAAGCTT TTGGAATGGTTAATAATAGAATTATGGTGTATCTTGATGGGTCATGAATTGTAGGCCCTTCTGGTTATTGGAGGATTCTG CATGACTGCATCCTCTGCAGTCTGCACTGTAGAAAGAACATTGATGTTATGCAAGACAAATTGTTGTTTCTTTAATGTGT GACATTAATGATGCTTATGGATATAGATGGTGGTGCATGGTGTAGGTGATTGACAAGAAGGTGTCTCTCAAAACTGATTC TCCACTGAAGTCTCCAACTTCAATTGTGTCGCCATTGAAGAGTAAAAATGAGAACTTGTGTCCAAAATCGACGAGCACGC CTCCACGGAAAAGCACTGCTAAGTCACCAAGTGCTGGAACAGTTCCAGGACAGCTTGTTAAGGTGCCCCTCAATTTCAAA ACATGGTGTGATAAGTCTTCTTCGTGGGATAATCTTCCACTTCCCATGTGTAATCTTGGAAAGGTATGGACCAACTCCAT CTCTCTAATAATATTTGAACTTTTGATCCATCACCTCGTGCCAGCTTTTGAACTTTGTTCTCTTCCTTTTCCAGAAAGTT ATAGCACATAGGAATGTTGCCTTTTTTGCGGCTGTTCGGTCTCTTGAAGAAGCATCTGCTACAGATACTGTGGTCCAATG CTTGGGGTATTTACTTATTTATTTATATAATCATTTTGCATCCTTTTTTTTGCTCTTCCACTAGGTGTATATATATGTAG TAGACACAATTAATCAAAAGCTTAGCATATATTGAATTAATGACAAAGAAAACATTAAAACTAGAACTTTAACTATTTAA TATTATCTTGACAGTAGATTGAAAATTACTCCATAAATAATTTTTTACAGAAATAATTTATAATTATTGAAATAGAGGAA TGATTCTGTGTATCTTTGCTGTCATCATTTGAGTCAACAGTGAAGCCAGTTTAGGAGAAATAACTTGTAAAATTTAGGGA GTGATGTTAAGTGTCAGTCTGTGACATGTGGGGAAATTCATCCATAGTGAGACTGAGGACACCAATTGAGATTAAAAAAT GTTCGGTAGATAACCAATTTGGGTAATTCGGTGTAGACACCCAAAGTAGTGTATGAGATAGAGGAAGAGAGGAGAGAAAA ATGATAGATGTGATATATGATGTAATGTGAATAGACAAACAGAGATTGAGAAGAAAATTGGGCGTATCTGTGTGCCAATA CTATTGGGGTGTTCGGATCTGGGTGCCAATATCATCATATCAGATTCCATATGAAAAATGCTTCTTTTCCTGGGCCTTAA ACTCCCTCTACTAAATGAGATTCATATCCATGGCTGGCAATGCTTATGCCATTGAACCTCTAACTAGAGCTTGTGGTCTC TCTCATTCACTGATTTTCCAATATACTCTGTTAGGTTTTTGGAGTTCTGGAAATAATGAGAAAGTTGCAACTATGGAAAT GAACCTGAACAGCTTCCTTGCAATACTATACATTTCAATTGTGTGCATGTACCCTATTTGTCTGGTAACCTATCCTCTGG CACCTTGTGTCTGTGGATTATGGTTTTACTTCTATGGCTCTTTACGAGTGCTATTTCCTCAGTAAATTCTCTCGCTGTGT AGTCGAAATAATCAATCTTATATCATTAAGTAGAATTAGGGTAACGTGTCTCATGACTATTTAATCACATCACCTAATCA TTATCACTTGCATATGTTTGGAATTGGGAGGAAATTTCTGTTTCCTATGAACATTTTTTTTTTCTTGAGGGTTAATGTAT GCAGACCTGGTCCATAATTCCATTAACTAGGGTTGGACTAATAAGTATTCACTTTCAGCATGTTTGCAGAAATCTGCCAC TCTTGTCGGACACTTTCTGCCGGATTACTTGTGAAACAGTTTCTGGAGCTTCATCTGAGTTTGCAGAGTGTAACAGAAGT ACTTGATTCCTTACTTGCCCCACTTCCTGAAACAAAGCCAAGCAACCACTCTACTCTACAATGTCTGATAGAAGATGCAT GTAAAGTTTCCACCTGCAAAAATGCTATATCTTGGGCACAAGCTGCTGTAGGAACCAATCTGTCCAAATTCAATATATTC AGATCACAAGCGAAAAGTGAGGTTTTGAATGGTGAGAAATGTCATTATGTTGTCATTGACAATTCTCGTGAGGAAATGAA TGTTGAGGATTCCTCTCCTCAAAACAAGCAAAATCGTGCAACTCAACCAAGTAACTTGCCAACTTCAACTGTTAAAAGAC TTCCTTCTTCAAAGCGGAATCTCTTGGTAGCCAAGAACAAGGATGCTGACAAGCAGGATAAATCAAAAGAAAGTGAATTA AAAGAAGTAGCATGTTTGGCAGAAAAACTACTTGCAGCTTCACGCGAATGGTTCCTGAAGTACTTGGAGGAATCTCTAGG TAATGAATTTGGGTTGAAAAATGAAGAGAGTGCTGAAATTGCATGTCTTCTTGGACAGCTAAAAAAGGTGAATCTCTGGC TTGATGGTTTAGTTGTTGGAGATAAAGTTGATCACAGGGCAGAGAACCTAAGGAAACGATTGTACCGGTTTTTACTTGAG CATGTTAATTCTGCAGTTGCTTCTAGTTAGTAAATATAGCTTCTAGTTAGTCTACAGGAACTAACAGAATTGACAAAATG GAGCATACTATTCTCAACTGATATTGGTTTGAACAGCTAACAGTGGTGTTACAATGAATGCTTAGACAGCTCGTTTTGGT TTTGGTATAACCACTTAGGATCTCAGTGCTTGAATAGTCTAATCTTAGTTAGTAACCCAAGTTATGCCCTTGACTATAGA AATTTGAGCTGTATTCTGTCAACATGTATATTTTATTTACTCTAATTTTATGATAAAACTGCTTTTGGAACAACTTTTTG TTCATTTGCTTCCTATTGGGTCTAGTTAACCTTGGATCAATTGCCCCTTTTAGAATTCCTGTACTTGTTGATTCTTGATT TCTATTAGATGTATGCAAAGAAATTGGTTGGGGCTACATGAGAAATCAAGTTGGGGCTACCTTTAGCAAGTCTTCCCAAT GTAGTGTGTGTTGGTTTCACTTGAGGCTACCTGAGAAATCTAAGGCAGAAAAAACATTTTTCTAAGGGCTCTGTTTTTCG GTTGAAAAAATGTAATGGTAACCTTAAGGTCCTAATGTTTATGGCTTAAGAACAAGAATGACGAATCATGCTAACTTCTT GGTGGATGAAGCAAGAAGCTACATGATAGAATGCCAGTCATTATCAAATCAGAAGAACAAGTGGGAAGCTAAAATTTATA CATTAAGTGCTTCTAGTGTGAAGTCAAGCATTCACAGAAAGTAATTCATATTTAGTTGGTCAAAAAGTAGTTTGAATTGG ATGAAGTTGATGATCTCTGAAGCTGTCTCTCATCAGTGACAGTTGGAACTGAGGTTCCCAGAGCTTTCATTCCTTTACAT GACTTCATGTGTTTGTGCATTTTCTCAGGCTTGAACGACTTTCCACATTGCCTGCATCATCAGTCCTATTTAAGGTCTCA TGTTTCATGATCACAATTAAAAGACATGAAACAAGTGTCTCTAAGCATATGGGCATAAAGTATGTAGCTTATTCTATTTG ACATATTATAACTCTATTCTATTTGACATATGACACCTTCAATTTAGATGCAAAACAACTAGCTCTTCAATTATTATCAT TTCTGCAGCCAAAAGTTGGTTAACATCACAATCTAGCAATCAATGTCAACTTTCATATTTTATATATTTTTTGTTGCAAG AGAAACAATTTGACAATCTAATAATCTAGTCAGCAGAATATCTTGATTCCTTTGGCCTATTTGTTGGAAACTTTTGCTGC TTTTAGTTTCAGTACATAGTCATACTCTGATTTTGTTCATTTTTACTAGACTAACTAGTCAATTGTTGCCTCAGGGGTTT CCATGCATCTCCATTAAGCTGAGGAGGATCAAAGATGCACTGATAAGTCCCACTCCTAATGCTACTAAATATTACTTGAT CTTCAACCTGTGTTACAATATTCTGCCACCAATATGACCATAATTTTTATAGAGTTTTCCCTCTCATTACATTGTTGAAA TGCATGCTAACAATTGAAATCATACTCACGTGACATGTTCAGTCACTTACGAGCAAATTGGTCCACCAAATGGCTTGTGA GGAGTGTGGTTCATGAACTCTCCCAACTTTTTCCTGTTCTTGTTTGTTTCCCCTCCATCACAGCTTTTTCTATAAGAACA AAAGAAAAGGACAAAAAATTTGCATCAAAAGATCCAGCCAAATAGTAATCTTTTTAACTTAAAGGATAATTAATTTGAAT ATTCTATGCTCAATTTATGATATAATTCCTCACCTGGGTCCATACTGTTCTTTCTGCTGATGATAATTCCAAGGAGTACC AAAACACCTGGCTGATCCTCCCAATTTGTCTCCTCTACAAATCTCAGCATGCTTTTGAGCTATGTTTTTAGCCTCCTTGG ATGCAATACTGTGAGCCTGCTTCATCAGAACCACAGCTGCATCATTTGTCTCCACAGTCCCACATGTAATCAAATTGCGG AACACGCCGGAAACTCGAGAGGAATTGACTCTACTCTTAGTGAAGGAGGATTGGTACGATGATGATGATGTAGCAGACAA TGATGAATCTGGTGTAGCAGTTTTGCTTTTGTCATCTTTGTTACCCTTCTTACTCAACAGATTGTGATACAAGGAAGGCA ATGAGAAATTGTCCAACTTCCCATGGTTCTGTTCTTTCAAACTCTCTTTCCCGGTACCCAAAAGCAGCTTCTCTTCTTCA ACCTTAGAAGAGTCATCATCTGTCACTGATGACCTGCCTGAGCTGAATACCAACGACGAATCCTGGCTAATTTCGGATGA CACTTTCGAACCCAAGTCTAGTTGAATTCGAGGTTCTTCTTCTTGCTTCTGGTTTTGTTTTTCCTCTGCAACTTGTAGTA CTTGAGGAGAATTTTTCTCAGAAAGTGTATCAGTAGCTGTAACTTTCTTTTCATCAAGTAAAGAAGTTTCTGCATCATCC AAAAAGTTGTACAATTTAATGGCCTCGTTAACATTATTAGCAAAAGATTGATAATATAGAAAATTTCCATGGATGGAAAT TATGGGTAGCCATACTCAAACATTAAAG
CDS sequence (LotjaGi3g1v0128800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTCTCTGACCCCTGGCGTGCTCTCAAAACTTCTCCAAAACGCCGGCAACAAGGTCACCGGCGAGCACCGCCAAGC CCTCCTCCAAGTCACAGAAATCGTCCCTCGCCTCTCCGACGACACATGGCAACCCAGCACCACCGGCGGCGGCTACTTCC TCAAACTCTCCGACTCCCTCCACGCCGCCTACGTCTCCGTCTCCGACCACGACTCCGACCTCATCCGCTCCGACAAACTC CGACTCGGCCAGTTCGTCTACGTCACTCACCTCGACTCCGACTCCGACTCCGACTCAGCTTCCCCTATCCCACTCGTTCG TGGACTCAACCCGCTTCCGAAGCGACGACCCTGTGTTGGAAACCCCACTGACTTGGTTTCTAGCCTCGCTCTTCCTTCAA CTCCCAAGCTTCATTTCAGAAAACCCAACAACAAAAACAATGGTTCAGGTTCTTCTGCTTCCGTTGTGAAGGTGAAAAAA TCGTCGCCATTGAAGGTGGAAGAAGCGAGAAGGTTGAGTTTGGATTCTGCTAGAAGGGTTTGGGATGCTGGGAAAACTTC ACCTGCTGCAACGAGTTCTAGTTCCAGATTCAAGTTCAAATCAAACCCCACTTCACCTAATGTGATTGACAAGAAGGTGT CTCTCAAAACTGATTCTCCACTGAAGTCTCCAACTTCAATTGTGTCGCCATTGAAGAGTAAAAATGAGAACTTGTGTCCA AAATCGACGAGCACGCCTCCACGGAAAAGCACTGCTAAGTCACCAAGTGCTGGAACAGTTCCAGGACAGCTTGTTAAGGT GCCCCTCAATTTCAAAACATGGTGTGATAAGTCTTCTTCGTGGGATAATCTTCCACTTCCCATGTGTAATCTTGGAAAGA AAGTTATAGCACATAGGAATGTTGCCTTTTTTGCGGCTGTTCGGTCTCTTGAAGAAGCATCTGCTACAGATACTGTGGTC CAATGCTTGGGCATGTTTGCAGAAATCTGCCACTCTTGTCGGACACTTTCTGCCGGATTACTTGTGAAACAGTTTCTGGA GCTTCATCTGAGTTTGCAGAGTGTAACAGAAGTACTTGATTCCTTACTTGCCCCACTTCCTGAAACAAAGCCAAGCAACC ACTCTACTCTACAATGTCTGATAGAAGATGCATGTAAAGTTTCCACCTGCAAAAATGCTATATCTTGGGCACAAGCTGCT GTAGGAACCAATCTGTCCAAATTCAATATATTCAGATCACAAGCGAAAAGTGAGGTTTTGAATGGTGAGAAATGTCATTA TGTTGTCATTGACAATTCTCGTGAGGAAATGAATGTTGAGGATTCCTCTCCTCAAAACAAGCAAAATCGTGCAACTCAAC CAAGTAACTTGCCAACTTCAACTGTTAAAAGACTTCCTTCTTCAAAGCGGAATCTCTTGGTAGCCAAGAACAAGGATGCT GACAAGCAGGATAAATCAAAAGAAAGTGAATTAAAAGAAGTAGCATGTTTGGCAGAAAAACTACTTGCAGCTTCACGCGA ATGGTTCCTGAAGTACTTGGAGGAATCTCTAGGTAATGAATTTGGGTTGAAAAATGAAGAGAGTGCTGAAATTGCATGTC TTCTTGGACAGCTAAAAAAGGGGTTTCCATGCATCTCCATTAAGCTGAGGAGGATCAAAGATGCACTGATAAGTCCCACT CCTAATGCTACTAAATATTACTTGATCTTCAACCTGTGTTACAATATTCTGCCACCAATATGA
Protein sequence (LotjaGi3g1v0128800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASLTPGVLSKLLQNAGNKVTGEHRQALLQVTEIVPRLSDDTWQPSTTGGGYFLKLSDSLHAAYVSVSDHDSDLIRSDKL RLGQFVYVTHLDSDSDSDSASPIPLVRGLNPLPKRRPCVGNPTDLVSSLALPSTPKLHFRKPNNKNNGSGSSASVVKVKK SSPLKVEEARRLSLDSARRVWDAGKTSPAATSSSSRFKFKSNPTSPNVIDKKVSLKTDSPLKSPTSIVSPLKSKNENLCP KSTSTPPRKSTAKSPSAGTVPGQLVKVPLNFKTWCDKSSSWDNLPLPMCNLGKKVIAHRNVAFFAAVRSLEEASATDTVV QCLGMFAEICHSCRTLSAGLLVKQFLELHLSLQSVTEVLDSLLAPLPETKPSNHSTLQCLIEDACKVSTCKNAISWAQAA VGTNLSKFNIFRSQAKSEVLNGEKCHYVVIDNSREEMNVEDSSPQNKQNRATQPSNLPTSTVKRLPSSKRNLLVAKNKDA DKQDKSKESELKEVACLAEKLLAASREWFLKYLEESLGNEFGLKNEESAEIACLLGQLKKGFPCISIKLRRIKDALISPT PNATKYYLIFNLCYNILPPI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 540 | 540 | 3.7E-188 | ||
| PANTHER | 1 | 540 | 540 | 3.7E-188 | – | |
| Pfam | 4 | 154 | 151 | 8.7E-51 | ||
| MobiDBLite | 133 | 261 | 129 | - | – | |
| MobiDBLite | 139 | 158 | 20 | - | – | |
| Pfam | 148 | 540 | 393 | 6.6E-63 | ||
| MobiDBLite | 161 | 178 | 18 | - | – | |
| MobiDBLite | 186 | 258 | 73 | - | – | |
| MobiDBLite | 436 | 464 | 29 | - | – | |
| MobiDBLite | 442 | 464 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0128800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…