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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0164600 |
| Transcript ID | LotjaGi3g1v0164600.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytokinin riboside 5'-monophosphate phosphoribohydrolase; TAIR: AT2G37210.1 lysine decarboxylase family protein; Swiss-Prot: sp|Q8L8B8|LOG3_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3; TrEMBL-Plants: tr|A0A1J7H8H1|A0A1J7H8H1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0164600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:22389773..22393552) extracted from Lotus japonicus Gifu genome v1.2.
TTAATTACAGCTTACTGGAGAAACAGTGGGGGAAGTAAAGGCAGTAGCAGACATGCATCAAAGGAAAGCAGAGATGGCTA AGCATTCTGATGCCTTTATTGCCTTACCTGGTTCGTACAATACTAGCTACTTATTCTTTGAGACATTTATGCATATACCT TTTATGTATATGAATATTTTCATCACATGATTCTACAATATTATCATTATGCTTATGTTTAATTCACATAAAATTGACAT AAAAGCAAGCTTATGTATTAGGACTTCACTTAAAAAGATAAAACAAAACAGTTTTAAGGGATGGGGTATAGACATGTCTG CGGACGAAGTCCGTACATTATCCCAAGAGAATATTTGATCTTGTGCACCACTTAAGATTAGATGGTGCATCATAATGACA AAAATTTTAGATTAGGTTCCAAAGCAAAAAAACATCAAATCAATTATCCATCAATGCTTAGTGCAACACTAAAACTTTCA ATATTACACAACGTGTAATTAATGTTTGATAAGGAAAAAGTTTTGTTGACTTCCACCAGGTCAAATATGAAGAGAAGAGA TGAGTAGTGATATGATAGGTAGTGTGATAGAAAATGTAAAAAGATATGGGAAAAAATGAGTACATATGAAATGAAAGGGA AAATAAAGTGTTAATGTATCAAAACTCATTTTATAATCAACAGGGGCGGAAGCATAAAAATTAAACATTAAGCAAAATTA ACAATGATTAACTAGAAAATGTAGTATAAAACTTTTAAGTAGGGATGGCAAAACGGGTTAGCCCGCCCTGCCAATAACCC GTCACAAACGGGACGGGTTGGGCTAGCCCGCCAAAAAAGTGGGCTCAAAATCCTAGCCCACCCCGCCAAAGGGCGGGCTA GCGGGCCAGCCCATGGGCCAATATATCAATGAAACAAAAAACAATCATTTTAGTAGAAAAACTTAGAATAATTCTTGTAT TATATTTTTTTCTAAATAATAAGAGATAATGCAAATAATAAAAGTGTAACAAAGAATAAAAACAATATTTTTGACAATTG ACATAGATACATCTATAAATATATAACAAATAATGCAAATAATAAAAAATTATGAATTATGAAGCTGCATATCTTATTTT ATAGACACAATATATGGGTGTACTATACAATACATAGTTACATACCAAAAAGAAAAAAACGTGAAGTAGGAAGAGAGAAT AAAGTTTTGAATTTGAGAGTGAAAGAAACAACTCATATCAAATTGATAAATTATCAAACTCAAGAAATAGAAATTTAAAG CTTTTTTTTAGAATCAAACCATATATATATATATATAAGAAAAGTAGCAGGTTGAAAAACTCATACAATAGAAATATTAT ATATATAAAAAAAAATAATGAAAGAAGAAAGAAACGGGGGAAGCAATCAGTACAGGGACATAAAAGAAGGAAGAAAAGAA AAATGCAAAACAGTACAAGAGCCAAGAACACATAGCAAGAGACACGCTGCAGCATAGGAATTATTGCAGATAAAAGGAAA ATACAACTGAAAAGATGAAACAAAGTGCAAATAACACTTTGTTGTGGGCTATGGGCATAGAAGAATTTTTATAAAAAAGA GGAAAAAAAATTTAGCCCAACAACGGCAGCCATACCCCTCACCACACCAGCAAAAAAAACAAACAAAGCCCGCGGGCCAG CCCGCCCCAGCCCGTTAAATTACGGGCCAAAACGGGGGCGGGCTAACATTTTTTTTGGGCTACATTTTTCAGCCCAACCC GTCCTATAACAGTGGCGGGGCGGGCTGGCCCAACGGGCTGAGCCCATATTGTCATCCCTACTTTTAAGAGGGTGAGTACA AATTTGTACACCATATTCGATTAAGAGTCATTGAATCTTAATTGGGCAAAGGGTGAAAATACAAATGAAAATAGGTCAGG CTGCCGACAATGATCTAAGGCCTAACCTACATCTGACTCAGACTCAAGTCAGACTAGACAAATTGGTAATAGATAAGGTC AAAATTTTTAGAAGCCTATTTAGTTCAAAATGTCATACTTAAGTTACTTAGAAAGCCTTATAAATATAACAGATCACCTT ATGTCAATAAATATAATTAATGTAGATGTATTTTATCATCTTACAATGGATTTTTTATGATGTCATAAAATTATATACTT ATTAAATTAATTATATGTATAAACATATTAGATTATATAATGATTTAATTATGAAATCTCTTTAGAAAAGATCTGGTGAC CTGTTTACTTTAACTAAGACGACATATTTTAGCTCATTAGTTTAAAAGTTTATTGGCATATTTACAAATAAATTTATCAA TCTACTCGAACATCTTATTATAAAATATGCTTATAAAAATGCTATCAGGTCAGACGAAACCTAAAAGAAAACCTATAATA AGAAATAAGCTGGACTCAAACTTTGAATTTTTTAAATAGCTTAGACCTAATTAAGCAGGTTTAGCCAGTTCTCACTCCTA GGAGAAATAAATTTTGGTTTAACCTAGAAGAGACAATGGAAACATTTTAATCAATTACCAAGATGGAAGTAAAATATAAA TCAAGTGGTCCTGCTCCACTCACTTTTTTTGGGCAATATTGAACCCAAAAATGGATACACCCAACACAGAAGTTGATCCT ACAGTGCATACCAAACAAATAAACATTAATCTCAGGCCTGCCACTCGCTTGAGCCTAGTTCTGCGCACCAAGGTGGGCTC AGCCCATTGTTATACTGCATTTTTCAGTTATTCAATGAGAACACATTTGTTTGACAAAAAAATATGAGAACACATTTTGG CACAAATGATGTTCTAATATTTTATTAAAATTACCATTTATCTCTCTAATATTTCCTATTTTAACTCTTTAATTTTCCTG TACTTTTAAGAATTATATTAACGTAAAGGTATAATTGATAAAACACAATTAATGTTCTTTTAAAAGTATAAAAATAATAG ATGAATAAAAGTAAAAGATTCTTAAAATAGTGACAAATAAAAAGTAATGGAAAAATATATTTCTTAAGTTTGAAACCAAT ATTTCTTTTTGTGACATTCTTTATGTTCATGAAGGTGGCTATGGGACACTTGAGGAGCTCCTTGAAGTGATAACATGGGC TCAACTTGGAATTCATGATAAACCGGTAAAGTCTCTCCTAAGGCTCCAAATATATTTTAAGCATATTTGGTTCATATTTC TATTTCCATTTTATTTTCAGTTTAAATCATTATAAAAAAGTTTGAAAATAAAAACCAAATTGACATATACTTTCATGTTT GAAAAAGTTTGAAAAATAGATTGTCATTATGAAAATTGGTGCCATCACTTACCATTTTATTGGATGATAATGGTTAACAA AAGTTCTGGTTAATTTTGGTAGGTGGGATTGCTGAATGTAGATGGATACTACAATTCCCTTTTGTCTTTCATTGACAAAG CTGTGGAGGAAGGCTTCATCAGTCCCACTGCTCGCCACATAATTGTGTCTGCCCCAACACCAAAAGAGCTTGTAAAAAAG ATGGAGGTAATTTCAATTTTTTCTTTAAGAAAATGATTGACGGACATTCTATTTCACGATATATATATATCCTTCTGACA TATGATTTAGTGACAATTTTTAACCTCCACAACACTATGTCTGAACCGTGTCTACGAAACTGATGTGATTTTTCTTCACC CCTATAGGAATATTTCCCAGTACATGAAAGAGTTGCCTCCAAGCTAAGTTGGGAAAATGGGCATCAAGATTAGCCCTAAA TTTGTGAAATCTGAAGATGA
CDS sequence (LotjaGi3g1v0164600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATCAAAGGAAAGCAGAGATGGCTAAGCATTCTGATGCCTTTATTGCCTTACCTGGTGGCTATGGGACACTTGAGGA GCTCCTTGAAGTGATAACATGGGCTCAACTTGGAATTCATGATAAACCGGTGGGATTGCTGAATGTAGATGGATACTACA ATTCCCTTTTGTCTTTCATTGACAAAGCTGTGGAGGAAGGCTTCATCAGTCCCACTGCTCGCCACATAATTGTGTCTGCC CCAACACCAAAAGAGCTTGTAAAAAAGATGGAGGAATATTTCCCAGTACATGAAAGAGTTGCCTCCAAGCTAAGTTGGGA AAATGGGCATCAAGATTAG
Protein sequence (LotjaGi3g1v0164600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTARHIIVSA PTPKELVKKMEEYFPVHERVASKLSWENGHQD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 109 | 109 | 1.4E-45 | – | |
| PANTHER | 1 | 108 | 108 | 1.3E-70 | – | |
| PANTHER | 1 | 108 | 108 | 1.3E-70 | – | |
| SUPERFAMILY | 1 | 93 | 93 | 1.98E-33 | – | |
| TIGRFAM | 1 | 93 | 93 | 2.0E-37 | ||
| Pfam | 1 | 90 | 90 | 6.6E-36 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0164600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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