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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0177700 |
| Transcript ID | LotjaGi3g1v0177700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | N-carbamoylputrescine amidase; TAIR: AT2G27450.1 nitrilase-like protein 1; Swiss-Prot: sp|Q3HVN1|AGUB_SOLTU N-carbamoylputrescine amidase; TrEMBL-Plants: tr|I3S967|I3S967_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0177700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:24670570..24675180) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAATAAAAGCAACCCATGACCATGATGATATTTGAATGAGAATTTTTTAGGGGTTTGAGATTCTGTGCAATAGCGAA TAACATTTATACAGAGCTATCTCCTCTTCAAACCAAAAGTGATTCCTTCCTTGCTCTTCTGCTGCACCGCACCGCATGGA GAAGAAGGGGAGAGAAGTCATCGTCTCTGCTCTGCAGTTTTCTTGCACCGACGATGTCTCCACCAATGTTGCCACCGCCG AGAGGTATGAATTTTGCTCTGTTTTAGCACATGAACTCAATTGCAGAACAAACGTATCATGTTGGATCACCTAGCTTAGA AGCATCACCTTTTCCTTCTTATAATCAAAACCCATGTTTGAAATTGAATTCATTTGGTACTTTTGCCCTTGCAACTCCAC ATCATGCTCTAAATCATGATTCATGAACTTGGTTACTAGGGTCTGCAAGTTAGTGAGCTTCCCAGGTTAAAATATTTCAT TTTTAGCTTTTGCATGATTGAGTATGATCACATTCATAAGAAGCATTGCTTATTAGAATGGAATTACACAAGGCAATCTT GATAGTGCTTAAGGGTACATTTGGGGTAAACAACTTAATTAAGTGCTGGTGGGCCATAAGCGCTTATTCATGAGCTAATT TGAGAAATTTATTGGATTAAGCTGAAAATAAGTTATAGATAAACATACGCTGATCTAAAAACCTAATGAAAATGAGCTCT AAACAGCTTATAGGTAGGTTGAAAGCTATTTACATAAGCTTTCCCAAACACTTGCATAAGCACTTATGCTATAAGATAAG TTCAAATAAGCTCTTCGGACCTAAATCTACATTTGCAGCTTGGGAAATAATTGTCATGTTTGCGCAGCTTTATCTTAATT TTTCTTGGGCCTGATCACTTGTTCTGAATTCCAATTCCCAACTACTGGTTCCTGTTTGAATTTTCTTAAATTACCAATGC TAGATTGTTGTCATATTCTTTGAACTCACTTCGGATGAAGCGATTAATGTTTCTTTCCTGCAATGTTCTCGAATGCTCAA CACAATTCTTGTTGCTAGGCTAGCACTCTGCTCCTGTTATTGGTGCAGGAGAGGAGCTTTATTTTGTGTTTCTTGGTAGA TTTTTTGTTTTTCCATTTAGATGTAAAATGTTAGTTCAGTTTGTGGTTCTGACTGAAACTTTGAGCTTCATCTTTTCTAT CCTGATTCTTGTTTAAGTAAATAAGAGAGAATTTTTAGATCAATCAGTAGTGGAAATATCATGTATTTGCATGTTATGTG ATACTTTTGGCTCGTCTTATGCAGGCTAGTTAGAGCTGCTCATAGCAAGGGCGCAAATATTGTTCTTATTCAGGTGCGCA TATTAAAACCTGGGATGCCTCTGAGTGGGCTTTCTACTTATTTTAGGTATCGATTATAGAGCATCTAATGCCTGACAAGT TAATTTGCTTCATTGTTATGGAAGTTTAAGATCAAGGTCCAAGTAGAATTTGTATGCATCAAAAGACAATTCTGTATATA TTTTTCATTCCTTGGGTCTCAAAACCATGATTGTGTTCTTACTTATTTATTCTTCTACTCAATAACCCTCAACGCTTTTT TAATGTTGTTCTTGATAAATCGAAAACTTAATATTTATATGACAAAGGTATCTAAATCTTGAGCTACTTGATTGTGGTGT ATCCTGGTTCTTCCAAAGAAAGTTCACATTCTTCCAAAAATCACAACCCCCCACCATGGTTTTCATTCGTTCACCCCTTC AACTATGTTATTAAAATGAGAAGGAGCAAAGCTCCATTATAACAATGCAAATATTATGGTTTTGGTTTTGAAACATTGAT CCACTTTGTTAGCAGTGATGAAGTCGATTCTAAAATAGTTTTTATATGATGGTATTTATTTCATATAACTAATTTTCACC ATGAAATTACAACAAATCATAGCAGGTTATGGTCAAGGTCAAGGATTTTGTCTTGAGTCAAACTATCTGATATGGTAGAT GAATATAGTAAGAAAATGTGTTCAAACTTAAAAAGGAAGCAGAATTGTTCTTCTGCCATATGTTTCTGCGAAATGGAAAT TGGATTGGATTTTAGTAAATTGCTTTTATGCTTCAGCATTATTTCTTTATGTATTGTGAATTATTTGCTTACACTAATAT TGATTTCTTAAAAATGCTGAAGATTCTTAACTATCCTCTTGGACATTGATAAGATGCTTTTGCTGGAATTTTAAAACTAC TGAATGACAAAAGGGATGTTCATGACTTTGATCTTTCTATGTTAAAAACACAAATACTTGTACCATCTCAGTGTAGAGAT ATCAATTTTACTGGACTTGTTACTTTTGGAGGAAAACTCTAACGGGTTATGTATTTGGATCATCTTCATGATGCATGGCT AATTTCAGGAACTCTTTGAAGGTCATTACTTCTGCCAGGCACAGAGAGAGGATTTCTTTCACAGAGCTAAGCCATATAAT GGCCATCCTACAATTATGAGGTAAAGAACTAAACAATGGCTTCTTCTATCTGCTTCTCAGTCAGTGTTTTCCCTATTATG GTGCTATCTAAGGGACAGAAGAACAAATATTGACTATTAGACTTTTGTATGTATCATTCAGTTTGTAGTGAACCTTATTC TTCTTTCAATGTCCATAATGCAGGATGCAGAAACTTGCGAAAGAGTTAGGCGTGGTCATACCTGTTAGCTTCTTCGAGGA GGCAAACAATGCGCATTATAATTCAATAGCCATAATTGATGCTGATGGAACTGATCTTGGAATTTATAGAAAATCACATA TTCCAGATGGACCAGGTATGCAATATTCAGGTCCTTATTGTCATTTAGTATGTGGCATCATAACTATCAAATTATCTCCC CTACAGGTTACGAGGAAAAGTTCTATTTTAATCCGGGTGATACTGGATTTAAGGTGAGGGTTAGGATAGCCTTGAGTGAA ATGACATTTGTTTTGTGGTTCTTTTTTATGAATGGTGGATGTTGTGTAACATTGATGCTTTTGCTGAACAGGTTTTCCAA ACTAAGTTTGCAAAAATTGGAGTTGGTAAGAACTTGCTAATACTATGACTGTTTACTTACATCTATTATTTTGGCCTATC TCTACAGAGTATATCTCAAACGAATATTTAAAGTGATTGTATCAAGATTTCTAAGATAGAAAGAACGTTGACTAAAGAAA ATTCTGCGTTTTGACTTAGGCTTTATTATAGCAACCAAAAGCATTTAGAAGCTGCATTACTCATCTTTCTGCCAGTTAGT AAACTGAGCTGAAGGAAGGGAAGACTGAAGCTGTGAATAATTTTTTTTTAATTTTAATTAACTTTCATGTCAGCTATATG CTGGGATCAGTGGTTTCCTGAGGCAGCCCGAGCTATGGTGCTTCAAGGTGCTGAGATTTTATTTTATCCAACTGCTATTG GGTCTGAACCTCAAGATGAAAACATTGACTCTCGTGACCATTGGAAACGAGTAATGCAAGGGCATGCTGGGGCCAATTTG GTAGGTTTTGGTACACTATTTTCTAACCGACATATATTTTCATCTATATTACTGGTCTATGATGTGCATATCCTTTCTCT ATCTGTGTACTTATGCTGTGCTCAACTGCTCGCAGTATTGACTTGAACTTTTTCCGCACTAGTTTTTGCATAGAAAAATC CCTGATACACCCTGCTGAAGTATGTATAAAACAATCAATTTTGTAAATTGCAGGTACCTCTTGTGGCTTCTAATAGGATA GGAAAGGAGATAATTGAGACTGAGCATGGAAAAAGTGAGATAAAATTTTATGGAAACTCCTTCATAGCAGGTAATTTGAC TTTCTTTGGCACTGAAACACATCAAAAGACCTTCATGTAAAAGACTATATACTTTTTCCACAAATCAAACCTTCGACCAA TCTTTTCTCGCTGTATTAATCGATTTTTTTCTTCATTTCTTAACACATTTTAACATCAGCTGCAGCATAACTCCTATGTT CCTTTTTTTGTGTCTTTTCTTTCAACAAACAGGACCTACTGGGGAAATTGTTTCAATTGCTGATGATAACGAGGAAGCTG TTCTTATTGCTCAATTTGATTTGGACAAGATCAAATCCATGAGGCATAGTTGGGGGGTGTTCCGCGACCGGCGTCCTGAT CTATATAAGGTGCTTTTGACATTAGATGGCAAAAATCCTGTCCAGTGATAGATAAACAGTTTTTTACTCTGTAATTGTTG TATAACCATGCCTGGGGCGTTTTAAGCCTTCACAACTTTCCAGAGGATTTATCAGTCTCACTCACCAAGAAGGCAAGAAC AAAAGGAAGTTCAAAATGTCACATTGTAATTTAATAAATATATGTGGGGATTAAAGATCAATCAGCAAATTGATTTGATA TTTTGTTGTACACACAAAACATAAATGATTCATTTGAATCACTTCAGAACATTGCGTTCCTTTGGGAGGATTTTTGAATA TTGCTGTTAGCTTATCATATTTTTAGTTATGGATATGAAACTTTTAACACATCATATTAATATTAAACTAGATGGCATAA ATAATGATGCATTCTGATTGATATAATTTATTTATATAAGTTTCTTACTGA
CDS sequence (LotjaGi3g1v0177700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAGAAGGGGAGAGAAGTCATCGTCTCTGCTCTGCAGTTTTCTTGCACCGACGATGTCTCCACCAATGTTGCCAC CGCCGAGAGGCTAGTTAGAGCTGCTCATAGCAAGGGCGCAAATATTGTTCTTATTCAGGAACTCTTTGAAGGTCATTACT TCTGCCAGGCACAGAGAGAGGATTTCTTTCACAGAGCTAAGCCATATAATGGCCATCCTACAATTATGAGGATGCAGAAA CTTGCGAAAGAGTTAGGCGTGGTCATACCTGTTAGCTTCTTCGAGGAGGCAAACAATGCGCATTATAATTCAATAGCCAT AATTGATGCTGATGGAACTGATCTTGGAATTTATAGAAAATCACATATTCCAGATGGACCAGGTTACGAGGAAAAGTTCT ATTTTAATCCGGGTGATACTGGATTTAAGGTTTTCCAAACTAAGTTTGCAAAAATTGGAGTTGCTATATGCTGGGATCAG TGGTTTCCTGAGGCAGCCCGAGCTATGGTGCTTCAAGGTGCTGAGATTTTATTTTATCCAACTGCTATTGGGTCTGAACC TCAAGATGAAAACATTGACTCTCGTGACCATTGGAAACGAGTAATGCAAGGGCATGCTGGGGCCAATTTGGTACCTCTTG TGGCTTCTAATAGGATAGGAAAGGAGATAATTGAGACTGAGCATGGAAAAAGTGAGATAAAATTTTATGGAAACTCCTTC ATAGCAGGACCTACTGGGGAAATTGTTTCAATTGCTGATGATAACGAGGAAGCTGTTCTTATTGCTCAATTTGATTTGGA CAAGATCAAATCCATGAGGCATAGTTGGGGGGTGTTCCGCGACCGGCGTCCTGATCTATATAAGGTGCTTTTGACATTAG ATGGCAAAAATCCTGTCCAGTGA
Protein sequence (LotjaGi3g1v0177700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKKGREVIVSALQFSCTDDVSTNVATAERLVRAAHSKGANIVLIQELFEGHYFCQAQREDFFHRAKPYNGHPTIMRMQK LAKELGVVIPVSFFEEANNAHYNSIAIIDADGTDLGIYRKSHIPDGPGYEEKFYFNPGDTGFKVFQTKFAKIGVAICWDQ WFPEAARAMVLQGAEILFYPTAIGSEPQDENIDSRDHWKRVMQGHAGANLVPLVASNRIGKEIIETEHGKSEIKFYGNSF IAGPTGEIVSIADDNEEAVLIAQFDLDKIKSMRHSWGVFRDRRPDLYKVLLTLDGKNPVQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 300 | 300 | 7.1E-129 | ||
| PANTHER | 4 | 291 | 288 | 2.9E-154 | – | |
| PANTHER | 4 | 291 | 288 | 2.9E-154 | – | |
| CDD | 8 | 292 | 285 | 0.0 | – | |
| ProSiteProfiles | 8 | 266 | 259 | 56.485 | ||
| SUPERFAMILY | 8 | 290 | 283 | 1.18E-80 | ||
| TIGRFAM | 9 | 289 | 281 | 1.7E-143 | ||
| Pfam | 14 | 273 | 260 | 2.3E-52 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Polyamine biosynthetic process | The chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups. | ||
| Biological process | Nitrogen compound metabolic process | The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen. | ||
| Molecular function | N-carbamoylputrescine amidase activity | Catalysis of the reaction: N-carbamoylputrescine + H(2)O + 2 H(+) = CO(2) + NH(4)(+) + putrescine. |
Expression pattern of LotjaGi3g1v0177700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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