Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0188300 |
| Transcript ID | LotjaGi3g1v0188300.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hexosyltransferase; TAIR: AT1G05170.2 Galactosyltransferase family protein; Swiss-Prot: sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2; TrEMBL-Plants: tr|A0A151RMU0|A0A151RMU0_CAJCA Hexosyltransferase; Found in the gene: LotjaGi3g1v0188300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:26857708..26860518) extracted from Lotus japonicus Gifu genome v1.2.
CAGATTCTGATTTCAAGGATGTTTGTGAACTCACTGTGAAACTTGATTTCAATGGCAACTTGTGAGATAGTTACTGTGGT GCTTTTCTAATGAGAAATTTAAATGTGTAAACAGGATGTGGACTATTCCTGAACCTAAAGGGCTTGCAAGGACAACAGCT ACTGAAGCTGAAAAACTAAATCTAGTTTCTGAGGGTTGTAATTCCAGAATTGTAAGCACTGTTACCTTTCTAATTTTAGT CTTTGATCATGTGCTAGTTATCAATGAAAGTTTGTTTTGAATTCAATGTTTCATTCTATAATGTATAGCATGTTTGGAAA ACCTTCTTTCTAAATTCAAAATCAATTTTAAGGAGAAGCTTCTGTGTATAACTTCTGGGTGACAAAATTCATTCTGAGGA AAAAGAAGCAGATCCAAATTAACATGCTTCACATCATATGATTTTTTCTAAGTTAGTGTATTGTTTCTCTTAGTTGCAAG AGAAGGAGGTGAAGCGCGAAACCAAAGGCATCTTCAAGACAAGTAATGCCATACAGTAAGTTACTTATACCATGATCCTA TAGTGTATCTGCTTGTAAGTTATTGTTCATCGCAAAGACGCTTAACTGCATTGAATATAGAACCCTGGACAAGACTATTT CGAACTTGGAGATGGAGTTGGCGGCTGCAAAGGCAGCTCAGGAGTCTATAAGAAGTGGTGCTCCTGTATCAGAAGATATC AAGATGCCTGAATCATCTGGTAAACGAAGATACCTTATGGTCGTAGGAATAAACACTGCTTTCAGCAGCCGGAAAAGAAG AGACTCGGTTCGTCAAACATGGATGCCATCAGGTTCATAATTTTTTCCTTGCTTACTAATTGTGTTCTATCATGCTTTGT TACATTTTTTTTCTGTTTACTATTGGCGATGGTTTCTGATGTTGAGTTTTGTGATAACATTGAAAACAGGTGAGAAAAGA AAGAAGCTAGAGGAAGAGAAGGGCATTGTCATCCGCTTTGTAATTGGTCATAGGTAAGTCTCGTCTTTCTTTCAGTGGTT TTATTATTACATAGTTGTCATGCAACTATATCTTGTTTTTATTTTAAATTTATGAATGAATTGTAAAATGAACTTTTTTT TCACTCTTTTCTGCAGTGCAACATCAGGGGGTATCCTAGACAGAGCTATTGAAGCAGAAGATCAGAAGCATGGAGATTTC CTAAGGCTGGTAATGGTCCTCTTTGTCTTATTGACGCTTCCGGCTCCCATGTCCCTTCTCTCATTTAGTCATTTTGTTAA GACTTGCTACTTTTACTTGACAAGATAACATAACCAAATTTATTTGAAATGAAAAAAAATAAGGTTTTCAAATCATTTTG TTTTGATTCTGCAGGATCACGTTGAAGGGTACCTTGAATTGTCAGCAAAGACAAAGATCTACTTTGCCACTGCTGTTAAC TTGTGGGATGCTGAATTCTATATCAAAGTTGATGATGATGTTCATGTAAATATAGGTATGTAATTTTTTCAATCTCATGA TAATCTGACCTTGCATGAGGAGTTGGTGATTCAAACTTAAATTTTTCTGCTCTACATGGTCACTACATAAATTCTCTTTC ATATGCATCTTAGAACTCTACATATACTAGACATGGTTTATGTTTCTATATTCTGTATGAATCTTGAATTTTTTTTTTTA TGGTAATATGTCTTATTATCCTATTCAATCTGTTTCCAGCTACACTTGGACAAACTTTAGTTAGACACAGAAGAAAACGG CGGGTTTACATTGGATGTATGAAATCTGGGCCTGTTCTTTCTCAAAAGTGAGAATTATTTTCTTTTATCCATGTTCAATT TAATATAAGAGTTGTTAATTTGTAATACTTTTTCTGGCTTCTTACCTGCCATTCCCAATTTTCTTGCAGAGGGGTAAGGT ACCATGAACCAGAATATTGGAAATTTGGCGAGAATGGAAACAGGTACTTCCGTCACGCCACGGGACAGTTGTATGCCATT TCAAAAGATCTTGCTAAATATATTTCACTTAACCAGTAAGTCCTTCATTGTCTCGCTTATGGGTGGAAATAGTAAACTGA AGTCAAATTTATGGACTTAATGCTGATGCATGATTTTCTGTCTCAGGAAGGTTCTTCACAAGTATGCCAATGAGGATGTC TCACTAGGATCTTGGTTTATTGGACTTGATGTGGAGCACATAGATGATCGTAGACTCTGCTGTGGTACACCACCAGGTGA AGATTTTTTCATTCATTTATAGATAATATTGTTAAGTTCCTACATTGACTCGAGAAATTGCCAAAATACTAAAGGATAGA GCAATCTTCACTCTTGAGCTAGCTTTTAGGTAGAGTTACGCCTAATCCAAATTCTAAAATGGTATCAGAGCCTATCAAAT GTTCAATTCTGCGAACTTTGCGGCTCCAGATGTCTAGCTCTCGTCATGAAGGATGTGTTATGCCAAAGTAGTCCTTATAA AGGGTAGAAAGATCCTCACCCTGAGCTTGCTTTCGGTCTACAGTTAGATCTTAAACCCAAATTCTAAGAGATATTGACCT CTGTGAATATACATGTTATCAAATCATTGTATATTTGGTTTGATTAAGGAATAATAAGTGGTCGACAGTTTCAGATTCTT GAACTTCTTGTTACTCTTGCAGATTGTGAATGGAAGGCCCAGGCAGGCAACGTTTGCGTTGCTTCGTTTGATTGGACCTG CAGTGGAATTTGCAGGTCTGCTGAAAGGATCAAAGAGGTGCACAGGCGATGCGGCGAAGGTGAGAAAGCTTTGTGGAGTG CCACATTCTAG
CDS sequence (LotjaGi3g1v0188300.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGACTATTCCTGAACCTAAAGGGCTTGCAAGGACAACAGCTACTGAAGCTGAAAAACTAAATCTAGTTTCTGAGGG TTGTAATTCCAGAATTTTGCAAGAGAAGGAGGTGAAGCGCGAAACCAAAGGCATCTTCAAGACAAGTAATGCCATACAAA CCCTGGACAAGACTATTTCGAACTTGGAGATGGAGTTGGCGGCTGCAAAGGCAGCTCAGGAGTCTATAAGAAGTGGTGCT CCTGTATCAGAAGATATCAAGATGCCTGAATCATCTGGTAAACGAAGATACCTTATGGTCGTAGGAATAAACACTGCTTT CAGCAGCCGGAAAAGAAGAGACTCGGTTCGTCAAACATGGATGCCATCAGGTGAGAAAAGAAAGAAGCTAGAGGAAGAGA AGGGCATTGTCATCCGCTTTGTAATTGGTCATAGTGCAACATCAGGGGGTATCCTAGACAGAGCTATTGAAGCAGAAGAT CAGAAGCATGGAGATTTCCTAAGGCTGGATCACGTTGAAGGACACAGAAGAAAACGGCGGGTTTACATTGGATGTATGAA ATCTGGGCCTGTTCTTTCTCAAAAAGGGGTAAGGTACCATGAACCAGAATATTGGAAATTTGGCGAGAATGGAAACAGGT ACTTCCGTCACGCCACGGGACAGTTGTATGCCATTTCAAAAGATCTTGCTAAATATATTTCACTTAACCAGAAGGTTCTT CACAAGTATGCCAATGAGGATGTCTCACTAGGATCTTGGTTTATTGGACTTGATGTGGAGCACATAGATGATCGTAGACT CTGCTGTGGTACACCACCAGATTGTGAATGGAAGGCCCAGGCAGGCAACGTTTGCGTTGCTTCGTTTGATTGGACCTGCA GTGGAATTTGCAGGTCTGCTGAAAGGATCAAAGAGGTGCACAGGCGATGCGGCGAAGGTGAGAAAGCTTTGTGGAGTGCC ACATTCTAG
Protein sequence (LotjaGi3g1v0188300.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWTIPEPKGLARTTATEAEKLNLVSEGCNSRILQEKEVKRETKGIFKTSNAIQTLDKTISNLEMELAAAKAAQESIRSGA PVSEDIKMPESSGKRRYLMVVGINTAFSSRKRRDSVRQTWMPSGEKRKKLEEEKGIVIRFVIGHSATSGGILDRAIEAED QKHGDFLRLDHVEGHRRKRRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNRYFRHATGQLYAISKDLAKYISLNQKVL HKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWTCSGICRSAERIKEVHRRCGEGEKALWSA TF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 175 | 175 | 1.6E-169 | – | |
| PANTHER | 1 | 175 | 175 | 1.6E-169 | ||
| Pfam | 1 | 71 | 71 | 1.4E-16 | ||
| Coils | 52 | 72 | 21 | - | – | |
| PANTHER | 175 | 313 | 139 | 1.6E-169 | – | |
| Pfam | 175 | 264 | 90 | 4.1E-16 | ||
| PANTHER | 175 | 313 | 139 | 1.6E-169 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi3g1v0188300.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…