Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi3g1v0194200 |
Transcript ID | LotjaGi3g1v0194200.9 |
Related isoforms 8 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Beta-glucosidase, putative; TAIR: AT1G02850.2 beta glucosidase 11; Swiss-Prot: sp|B3H5Q1|BGL11_ARATH Beta-glucosidase 11; TrEMBL-Plants: tr|A0A072UHM7|A0A072UHM7_MEDTR Glycoside hydrolase family 1 protein; Found in the gene: LotjaGi3g1v0194200 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:28215085..28218222) extracted from Lotus japonicus Gifu genome v1.2.
AGGAAGATGTCCAGCTCATGGTGAAAACAAGCTTAGATGCCTACAGATTTTTCATATCTTGGTCAAGGCTTATTCCAGGT ATTATTACGCAAATGTTGCAAATGATAGATTCTATTATGATCATGGAGTAAGAGAAGTAACTATTTTAGCATTATGATCA AGACTAGAGCCAAGCTGTCTGTAATTGACATACACTTGGTTTGATTCTGGTGCCATGAATGAATTTTGCTACTCTATGAG CATGTATGCAACTATAGTTTCTTGTATGAAACTGTTATGTTATTTGTAATTCTGACCTTGATCTCTTGTATTACCAGATG GGAAAGGACCAATTAATCCCAAGGGGTTGCAGTATTACAACAACCTCATCAATGAACTAACAAGCAAAGGTTCTTTTGCA AACTAGAATTACTTTTTCAAGTTTAACTAACACTTCAAAGAAATCCTTTCCAAGTTATACATTTGTTCTTCTTCGTAGGA ATTCAACCACATGTTACATTGCATCATTGGGACCTACCACAAGCACTTGAAGATGAATATGAAGGATGGGTTAGCCGAAG AGTAGTGTATGGTTCCCAAACTTTAAGTGCCTAATACCATGACCATCTTTTAGCAGATAGGATGTACCAAAAAAAATCTT TTAGCAGATAGGAGTTCAATCATACTGCATTTAGCTCAATAAAAATAATATTGTCTTTCTATGATTAACGTTTACCTATT CATATACGTTCACTTCCAGAAAAGACTTCACAGCATATGCTGATGTGTGCTTCAGAGAGTTTGGCGATAGAGTTAAATAT TGGACCACAATAAACGAGGGAAATGCGCTCGCAATTGGGGGTTATAGTGCAGGATTTGTACCACCTCAACACTGTTCTCC TTCCTCTACATATAACTGCTCCAGGGGAAATTCCTCAACTGAGCCGTATTTGGTAGCCCATCATGTTTTGTTAGCACATG CATCAGCTGCTAGACTGTACCGGAAGAAGTATCTGGTAAACCAATTTATGTTACATGCACGGTGAACCTCTCTTCTTTGT AATCTGGGACTTCTTTTTACATTAGCATAATTGTGAAGGATGTCGTATAAGGTGATAGTTATGACTTATGGATATCATTT TGACGACAATAATCGAACTATAGTTTGTCTTGAAAACTACCTCTGGTGTATGCAGGACACACAACATGGATTTATTGGGT TTAATCTTCTTACCTATGGTTTTGTTCCTCTAACAAATACTAGTGAAGATATAAATGCCACTCAAAGGGCCAAAGACTTC TATACGGGGTGGTAAGTGATACTAACAATTTGACAGGCTTAGCTGTTTCTTTATACCCTAATGAATTACTAGAGATGATT TCGTTTATGGTTTGTTTTTGCAGGTTTTTGAACCCCTTTATTTTTGGACAATATCCTGACAGCATGAAAGAGAATGTTGG CTCAAGACTTCCTGTCTTCACCAAAAGGGAATCAAGTTTAGTCAAGGGCTCAATGGACTTCCTAGGAATAAATATCTACT TCACATATCTAGTTAAGAACAACCCAGACAGCCTGCACTCAGAGGATAAAAGTTTCACAGCAGATATTGCCGCAGAGCTT CAATGTATGTTTATGTTACCATTTATTTACTGTGTTAGTTCTGATATGGCTGCAGAGCTTAAATTTATATTTATGTTTAT GTTAAATGTGTGGTTTGAGCGTAAACAAGTAATTTTCATATAAATATCTCTTTATTCTATGATATCTCATCCTCAATTTT ATGAATTGAGTTCTTTTTTTAATGGATATGTTTTCGCACTGTTTTACATGTTGCAACAGAAGATCTAATGAGATTGTATT TCAACACTAATGATTTTTTTTTCTTTAATTTTGGTCAAGGTATGGGTACTTGATAATGCCTCTTGCCTCTGTTGGTACTT GATAATACTTCGTAGTCATATAGACCATCTCTTGCCATTCATGGACTCACCCTGAAGGAAATTCCTTTAGAAGCAAACAT GTCATATCTCATACATAAATAATTGTTAGTATAGAAATCCAAACTGTTGGAAGACTGAATTTTGTAAACTGCAACCATTT CCTTTTATTCTTCTGACTTTCCTAGGATCAAGATCCTTTCATGTGAAAACTCTCTCATGTTTCTTCATGTTGAAATTTTG AGTCTATCTCTCTCCTTATATATATTTATGAAGAGATAGATGGGCACAATGTTTCACTTGACATCGTCATGTAACATGAG AGGATCCAAGTCCAACTTTCCTAACATCACCAACAGTATCAAATTTTGACAACACTCATCTTGACTCTTATATTTACTCT AATATTCGTGTGTTATCCTTTTTCATCCAACTTTGAAGATTTTTCATCTAACTATGTTTTTTTCTTGTTGTAGACGTTCA TGAAAATGGTACGTCTACATATGAGGTGAGAGTAGAGTTTGAATGTTCTCTTATTATTTAGGCAGTGAAGGTTCCATGTA TTCTACTAACTATCTGATTGGTGTAGATTCCAATTACCCCCTGGTCTTTGAATGGGTTACTTAAGTCACTGAAGAAAGAA TATGGCAATTTTCCAGTTTACATTCGCGAGAATGGTGTGCTTGACTGAGATCAATGTTGTGTAAGGCTCCAAATCCTTTT ATCCACAAAATCTACTTGTTCTGTGTATTGCTATGATAAATCTTCTCACATTTTAGGTCAGCAAACACAACGGAGGAATT CATCATTAGATGATTTGACAAGGGTGAAGTTCTTGCGTGAATACCTAGGGAGCCTGGTCGATGTACTTTCATTTTCAAGA AGGGACTTCACAGTAGGTGTATCATATCATAAGGTTACATGATCTTCAATATCATCTATATTCTATATACTTTAGAAAAG AGGAAGGTTATGAGCCTCACCTCGATGATTTGACACTCCAAGAATGACTCTCACCCACCCCCCTTCTTTGCCTGACAAGT GTCACCTTCTTATTGCTTTGGACCAAAATAGTCAAAGCCCATTTTGATTTCAAGTTTTTTATGGAGGCTCATTATTCAAA TCCATTTGAATGATGATTTTGTTTTTATTTTTTTTAACCTCTCATTAATTGTTAACATAAAGGTTGAATGCATATACCAT TGATTATCATTTTTCAAA
CDS sequence (LotjaGi3g1v0194200.9) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAAAACAAGCTTAGATGCCTACAGATTTTTCATATCTTGGTCAAGGCTTATTCCAGATGGGAAAGGACCAATTAA TCCCAAGGGGTTGCAGTATTACAACAACCTCATCAATGAACTAACAAGCAAAGGAATTCAACCACATGTTACATTGCATC ATTGGGACCTACCACAAGCACTTGAAGATGAATATGAAGGATGGGTTAGCCGAAGAGTAGTAAAAGACTTCACAGCATAT GCTGATGTGTGCTTCAGAGAGTTTGGCGATAGAGTTAAATATTGGACCACAATAAACGAGGGAAATGCGCTCGCAATTGG GGGTTATAGTGCAGGATTTGTACCACCTCAACACTGTTCTCCTTCCTCTACATATAACTGCTCCAGGGGAAATTCCTCAA CTGAGCCGTATTTGGTAGCCCATCATGTTTTGTTAGCACATGCATCAGCTGCTAGACTGTACCGGAAGAAGTATCTGGAC ACACAACATGGATTTATTGGGTTTAATCTTCTTACCTATGGTTTTGTTCCTCTAACAAATACTAGTGAAGATATAAATGC CACTCAAAGGGCCAAAGACTTCTATACGGGGTGGTTTTTGAACCCCTTTATTTTTGGACAATATCCTGACAGCATGAAAG AGAATGTTGGCTCAAGACTTCCTGTCTTCACCAAAAGGGAATCAAGTTTAGTCAAGGGCTCAATGGACTTCCTAGGAATA AATATCTACTTCACATATCTAGTTAAGAACAACCCAGACAGCCTGCACTCAGAGGATAAAAGTTTCACAGCAGATATTGC CGCAGAGCTTCAATACGTTCATGAAAATGGTACGTCTACATATGAGGTGAGAGTAGAGTTTGAATGTTCTCTTATTATTT AG
Protein sequence (LotjaGi3g1v0194200.9) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVKTSLDAYRFFISWSRLIPDGKGPINPKGLQYYNNLINELTSKGIQPHVTLHHWDLPQALEDEYEGWVSRRVVKDFTAY ADVCFREFGDRVKYWTTINEGNALAIGGYSAGFVPPQHCSPSSTYNCSRGNSSTEPYLVAHHVLLAHASAARLYRKKYLD TQHGFIGFNLLTYGFVPLTNTSEDINATQRAKDFYTGWFLNPFIFGQYPDSMKENVGSRLPVFTKRESSLVKGSMDFLGI NIYFTYLVKNNPDSLHSEDKSFTADIAAELQYVHENGTSTYEVRVEFECSLII
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 285 | 285 | 1.7E-157 | – | |
Gene3D | 1 | 287 | 287 | 1.2E-113 | – | |
PANTHER | 1 | 285 | 285 | 1.7E-157 | ||
SUPERFAMILY | 1 | 282 | 282 | 9.84E-97 | ||
Pfam | 4 | 265 | 262 | 3.7E-78 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi3g1v0194200.9, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…