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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0341800 |
| Transcript ID | LotjaGi3g1v0341800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein FAM32A-like; TAIR: AT1G16810.1 7-dehydrocholesterol reductase-like protein; Swiss-Prot: sp|Q6GQN4|FA32A_DANRE Protein FAM32A-like; TrEMBL-Plants: tr|I3SW54|I3SW54_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0341800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:71657717..71659234) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCGTCGTATGACAATGTTGTTGGTGGGAAGTTGAAGCTCAAGGGAAAAGCATTGGATGTGGCTGGTGGGATCAAGAA GAAGAAAAAGAAGAACAAGAGAAATCAAGAACAATTTTCTCAAGTTGTTGATGATGAAATTTCAGCAGGTTGGTATCTTT GTTTAAGGGCTATGAGTTATATATCCTATTTTCTTTCCTTAACTGAGAGTTGTCGAATTGCTATGAAATTTCACCATGTT AAAACCTTTGCCTTCGGATAAGGCTCTTCTAAACTCTAATGTGAGCTTGTCTCTAAATGTGATCAAGTAAGATTATCTAT CCTTGGTTGAATTTAAAGTATGTCATAATCTTGACTCACTGTAGAGACAAGTTCACTTCAGAGGAGCTTTTCCATGATGG TTCTTGTTATATGGAACAACCATCCTGTGAAATGGTACATGGTTATATTAATCTCTAAATAGTTATCCTACATATACTGC ACTAATGATTCATGAACTTGACATGGGGGTGAGGGATGAATATACAGCTCTAATTATTTGTTATTAAGATGGTTTGCCTA TGGCCAAGAAAAAACACAATGAGAAAATGGGTGAATTTTGAAGAACAATACCACATGATGACAGTAATAATCTTGACAAG AATATATGTGAAACTGTAAAGTTTTCTTATTCATAAACTTTATCTGGGTAAACTTATGGCTTTATGTTTTTTTGGATAAG CCATTGAAATATATAATAAATAGGCAACAAGGGGTGCCGCCCATAGTACAAGATATAAAGAAGAGGAAGGAAAGGAGAAG AGAGTTGAACAAAAAAAACAGAGACAGAAATAACGAAAGCAAGAAAAGTAAAACAGAACAGGGAAAAAAGAAAGAGCACT AGTGGAAGTGCTGCAATATATCCCTGCAAACCCCTTCTAAGAGCACTTATGGCTTTATGTGAAATTCTAAATAGTTCCTT AGTCCATTATTCCTCTTACTTGAATAGAGATTTTTCTTTTGGGGTTAAAAATGATAATGGGCAACATTTTAGGACAACAT TCAACACATTTTAGGATTCAATTTCATATATTATTACTTGTTTATGAGTTGCAGTAAGCAGGGAACTATTGTGCAGAATA GATTTTTCTTGAATGGTTTACAATTCAGATCTTTTTGATTCACATTTCTCTGATCTTTTTATTGGTAGTTCACCATTATG CAATACACATACATTTATATCAACACTTATGTTTATTTTATTTTTTATATAGGTGGAAGTACAGAACAAGCAAAAGAGCC TGATGAGCAAGACGAGATAAATGATGATGGCAGATTGAGCGGAGAAGAAAAGACTGCGCATTATGATGATCATCTTACAC CAGCAGAGAGGCGATACATAGAGCAGAGGGAGAAACTTGATGTCAATAGATTGGCCAAGATTTCTAATAAATCACACCGT GATAGAATTCAGGATTTCAACCAGTATCTTGCAAACATGAGTGAGCATTATGATATTCCTAAAGTTGGTCCAGGATGA
CDS sequence (LotjaGi3g1v0341800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGTCGTATGACAATGTTGTTGGTGGGAAGTTGAAGCTCAAGGGAAAAGCATTGGATGTGGCTGGTGGGATCAAGAA GAAGAAAAAGAAGAACAAGAGAAATCAAGAACAATTTTCTCAAGTTGTTGATGATGAAATTTCAGCAGGTGGAAGTACAG AACAAGCAAAAGAGCCTGATGAGCAAGACGAGATAAATGATGATGGCAGATTGAGCGGAGAAGAAAAGACTGCGCATTAT GATGATCATCTTACACCAGCAGAGAGGCGATACATAGAGCAGAGGGAGAAACTTGATGTCAATAGATTGGCCAAGATTTC TAATAAATCACACCGTGATAGAATTCAGGATTTCAACCAGTATCTTGCAAACATGAGTGAGCATTATGATATTCCTAAAG TTGGTCCAGGATGA
Protein sequence (LotjaGi3g1v0341800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSYDNVVGGKLKLKGKALDVAGGIKKKKKKNKRNQEQFSQVVDDEISAGGSTEQAKEPDEQDEINDDGRLSGEEKTAHY DDHLTPAERRYIEQREKLDVNRLAKISNKSHRDRIQDFNQYLANMSEHYDIPKVGPG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 137 | 137 | 2.0E-51 | – | |
| PANTHER | 1 | 137 | 137 | 2.0E-51 | ||
| Pfam | 4 | 98 | 95 | 2.8E-17 | ||
| MobiDBLite | 23 | 87 | 65 | - | – | |
| MobiDBLite | 56 | 87 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0341800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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