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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0380500 |
| Transcript ID | LotjaGi3g1v0380500.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Variant surface glycoprotein ILTAT 1.23; TAIR: AT1G01770.1 propionyl-CoA carboxylase; Swiss-Prot: sp|A5GPT0|ASSY_SYNPW Argininosuccinate synthase; TrEMBL-Plants: tr|K7L083|K7L083_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0380500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:77309328..77317031) extracted from Lotus japonicus Gifu genome v1.2.
ACCAGATTTACACCCAAAGAAAATATAATCCTCACATTTGAATGGGCAATATTCAAAAAGCAAACAAGCAAGGTGATAAA CTTTTGAGTTTTGAGGAAGTGATCATGCCACACATTGCAACACTTGCACCAACCAATCCAGCTTAATCTCATGTCTCAGC TTAATATTTTATTTTTAATTTCCTTTTTTCCGTCTCACTCCATCTATTTTTTTTTTCTATATGATTTAAATAAATTTTTT TTTTCTATTTACCAAATATTCACAAGAGCAAAATAATTCAGTCCCTATTTGGGTGAAAAACAGGTATATATATGAAGTCA AGAATCTAATTCTGATAATCACTTCTTAGTCGTTGATTTCAATCTGAGTACGATGAACTTGTAATAAATCTTCATTGTTC ATATTGCTTTGTGTATGATCAACATTCTTCTGTAACTGGGTATGTAATCTCTGCATGTTGTTGTTGTGATACTCACTACC CACCTCACAATTTGTCTCGTTGAATTGGATATAGCATACAAGTTTTCATTTTGATCAATGTTCCGTGTTCAATTTTGACT CTGCATGCTATCTTTTATGGTGGGTCATAACTGCATATTCTTGTTAAGGTTGAAAGAAAATTCTCAATTCTAGCCTAATG CTAATCATCTGTATGGTTATTTGATATTAGAGTTCAATCATTTTCCGTAACTTGCAACCTTGTTTTGCAATCATGTTCAT GTTGTGATGTTATAAGGTTATAAGGACCTAATCTCTTTGATGATTAACCTGCAACTTTGTTTTGCAATAACACAGTTTCT TTCTATAGAAATATTGAGAGGGCTTTTTGAATTTTATTTAATTTTTATTCATCTGGGTGTTGTTTTGCTAGCAGAGTAGC AGACCTTGGATGGAAGTTAAAGTGATGGAACACCTGGATGGAGAAGAGGCCCATAATTGTGTGATCAAGCTGGTTGACTC ATGTTCCTCACCCCTTGTTATTTTTCTAGTTGTTGAGCCCGTTTGGATAGGGATAAAAAAAGCAGTTATTGGAGCTTTTA TACTAAAAATGCGCTAGATAAGCTCTAATAAGTGCTCTTTGATCCGCCTCCAAACGGGATAGTTGTCTCCAATGCAGCAT CAATGCCAGTGGAGGAATTGACTATATATATTGATATTACATTACAGAGAAGTAGTCCTGAAAGGCGAAGGGATAAGGTT TACATAGGCTGTGGAGCAGGGTTTGGTGGTGACAGACCTTTGGCTGCTCTGAAGCTGCTTCAAAGAGTCCAAGAACTAAA TTATCTGGTCCTGGAATGCCTGGCAGAGCGTACTCTAGCTGATCGATATCAAATCATGGCGTCTGGCGGCGATGGTTATG ATTCTCGTAGTAGGTGTTTCCTGTTCAAATAAATATCATTTTGTCCGTGTAATTTAATTATGGTTTTGAACTTTTGATTC ATCAGCTCAATATTCATTCCTTCCATGCACTTAAGCACAAAAAAAATTCCTTGTAAATTGCATTGATATGCTTGGTGTCA GTTACTCAGCTTCTCACGAACAACTATTCTGCTTTTGTATATATCTGTTACCTAAGCCTTAACTGGACCTTCTGACTTCT GAGTGTTACTAGCAAATTTGAAGTTGTTTTGAAGATGTGTAATTAACCTGTAGGTATAATTCCAATGTTTTTTCTTTTAG ATGGGAAACTAAAATCTTCACATATAGAAACACAAGTACATTTGTCTTTCTATTGTTTTAATGCTTTTGATATTGAAGCC ATTAGCTATGGACTATCTCTTTGTTTCCTGCTCGTGCATTCTTCTAATCTTAAGTTGCTGATCATGGTGAAATTTTACTT GCAGTTTCTAGCTGGATGCATATGCTGCTGCCTCTGGCTTTGGAAAGAGGAACTTGCATAATTACCAATATGGGTGCTAG TGAGAATTTTTTATACTCCATTCAAAAGATTTTATATGTTCTTCAAAATTTTGTATAACGTTGGTTTAAATTGAGATAGA CTGTGGTTTCTCACTTTTGTTCTCTAACTCCATTCATTTTTTGTGTCTAAAAGTGGATCCTCTGGGTGCTCAGCAGAAGG TCTTGGAAATAGCTAGCACACTAGGGCTTAATGTTTCTGTTGCTGTTGCTCATGAGATGTCTATTACAGAATCAGGTATT TAGGTTTCCCTCTAAACTTTTCTATGGTAAATTTTTAAATAAATATTCCAATTATGATGTGATTTTAAATACCACCTAAT TTTCAATTCTGTAGTTGCCTCTGGATTATATTTACTCACTGTCACAAAGGCAATGTTTTAATTTTTTCATAATTTTTCTG TCTTTAGCTTTTTGCTAGGTGCCTCTCTTAAATTTGTATACATATGGTTGTACTATCCTGCCACCTTATATTTATTTATC AAGGAAAAAAAGGGAGATTTTCCTGCTCTTCTCCATGCTAAGTTCTATTACTTATATAGACATACAGCATTTTTCAGGTT CAGGATTCTCACCTGCAAAATCATATACCATGAAGGGTGTAAGATTCTGTTCTTATGTGGTTATTTTGTGTTCAACTAGA ATCATTCTCTTATTAATTCTCTTGTTTTTCCATTTTTGTGCTGTATTACCAACCAATTACTAAGGAGCCATTCACCAGCC TGCGCAAAATGGCATATCTGTTTTTCTTTTTCATTTTTTGTTATGTGATGTCATATGGCAAGTGTAGTTTTTACTTGTTT TTTGGCTTATCTATTTATTGATTGTCATATGAAGAATTTATTAACTGTTAGATATAAAATCATTCATGAGCATTCACCTA GTAGCTTAAACTTTTGAAATAGTTAGTCATAGACATGGTATTAGAGCCTCAATGGTCAAGCAATCATTAGTTTGATCCTT GTTGACTTGTTCTTGTAATAAAAAAAGTTGAATTTCATAATAAGGTATGGCAGGCTTGTGCGTTATCCATGCTTCAAGTG AAAAGGGATCTTGCATTAGAGGGTATATAAAAAAGAAAACCATTCTTGAGCTGATCTAATAAGTAATAACTTAACCTTCT AGGAGAGTTGGTCATTGATATTAATAATTGTTCCTGCAATTTTCCTTCACTTGTTGACTTGTAAGGCTGCATTCTGGTTT ACTTATTGAACTAAGTGAAGGGATCAACCTGTTACCCTTTGTTTAACTTCCAATAACATTGTCACTCAAATGTAGAACTC ATCTGATTTATGCATACTTTCTCCCTTTACTTGACTTTTGTTACGCTGGATGTGAAATTTGGCTGTAATATGTGAAGGGT ATCAGCACCTACTTGGGAGCCGCTCCTATTGTGCACTGCCTTGAAAAGTACCAACCGAATGTAATAATCACTTCAAGACT TGCAGATGCAGCTTTATTCTTAGCACCAATGGTATGAAATCTTATCTGTTCATACTGCCCATCTTTGCCTCCTTCCTCTA TCAATGCCTGCATTTTCCGTAACTAAATTGAGTTTCCATGTGGATAACATTGCTTTCTACAAGGTATATGAAATTTTATA AAGCTTCAGTTGATGCACAATTCTTTATTTTAAGCGGGTCAATAGAGACTCCATTAACATAGGCCTATTTTGGATAGATC TTCAGCTGTGCTCTTAGAGTGGGAATTTGGGATCCCTGTGATGAATCACAGCTCTTCGAGCCATCCCCTTATCTTCCTTT CAATAAAAAGACGACAGGCAGAACGATATACATACATTAGGCTACCATTTTTTCTTGAAAGATAAGGAGATGGCTTCGTT GATGATTCTTTATTTATTTATACAAGTTTAGACCATTGAATAAGTGCTCATGGAATGGGATTTTCATCAATTTAATCATT GAATCATTGGTAAACAGTTAGCTGATTTTACAAATAATGTTTTAGAGAAGTTGGACTTCCATTCATACTTTATTAACTTT TTATCAATCAATTGTGTGAGATATATAAACCATTCAAATTCCTTCACTAAATAGTTTAAGCTTTTGACCGAGTTAGTTCA TTACATGGTATCAAAATCTTTATGACCAAGTAGTCTAGAGTTTGACCCCCTCCCCCCCCCCCAAACAAAATTTCATTAAA CGTTGAATTCCATCACAAGGTTAGGTGTGCCTATGCATTGTACATGTTTCATGCCTAAATGACTCTTGCAATAGCCTAGA TAGAAAATACAATTCACCTAACAAGTTAAACTTTTTGGATGGTTGGTCTATGATTTGTTGAAGTTTTGGAGTGGCTAAAA AGACACATACGCAGACATAAGAAGTAACATGGCAACAGAGAGCAATACTTGTGTTTATTTCCTCTACAAGAAATTGTCAT GTTAATTAAGATTTTCGTTAAGAGAAATTCTAGACATTTATGTTGAGAATATTACATTTTTAATATAATGTTCAAAAGAG CGTAGATTGTATAAATTGTATTAACTAAAGATAGGATCATAAGAGCTGCAATATTTAGTTCTCTGTAGCTTAGCTATCTG TTGGACAAAGTTCTGAATGATTTAGCCGGTATATGGGTAGGTTTATGAACTAGGTTGGAACTGGGATGAATTAGAGCATC TAGCTCAAGGATCTCTGGCTGGCCATCTTCTAGAGTGTGGTTGTCAACTTACAGGGGGATATTTTATGCATCCAGGTTTC TTAATACAGCTTAACTCTACCCTTGCATATGGTTTCCAATAAAAAAATGCATAGGTAGTGCTAATGAGATGATAGTGTTT AAGATCTGATGCCCCATCTTGTTTGTTTAGGTGACAATTACCGAGATATGTCCTTTCAGCAACTACTGGATTTATCACTT CCTTATGCTGAAATCCGATTTGATGGACAAGTATGTGTAGCAAAAGCTGAAGGTAGTGGGGGAGTTCTAAATTTCAATAC ATGTGCTGAACAATTACTCTATGAGGTTGGAGACCCTGGTGCTTATATAACCCCTGATGTAGTAAGTCAAATGTTTGCTC AAAAGCACTGGACATCAAGGATTTATGACTAGAGGGTAGAATGTACAAAAAAACTCATATCATGTTCTTTAACAGGTCAT TGATCTTCAAGATGTTTCATTCCTTCCACTTTCAAGCTGTAAAGTTCTCTGTCTTGGGGCAAAACCGTCTGCTCTATCAG TTCCTGATAAACTTTTGCAGTTGATTCCGAAGGTACATTTCTGAATCATTCTCTTCACAATGCATATACCCATTTATGTC TGTGAAGTGTGATCTCCTTGTACCCATGTGTATCATTCCTACACCATTTCTTTTCAAGATTGTTCTTCTTGGTAGATCAT TTGCTCTATTGCTATAAATACTTCTATTAGGATTGTGGATGGAAAGGATGGGGAGAGATATCTTATGGAGGTTACGAATG TGTTAATCGTGCTAAAGCAGCTGAATATCTGGTAACCTCGTGCAGCCTTATATTCACCATTTATATCCACAATCCTGCTT CATTTTTTTTAAATTATTTTTATTCGACTACTTGATTAGACTACTAGGTAATTTCCAGCTCACTATCAATTGATATATTA TTCATATGCTTCAATAGGTTAGATCATGGATGGAAGAAATACTTCCTGGTCTTAATCACCATGTACTTTCTTATATAATT GGGTTTGATAGCCTCAAAGCTACCACTACCAGCAGCAATGAAAATGCTTCACCACAGAGGACTAGCAGAGATATTAGGTT ACGCATGGATGGACTTTTTGAGCAGAAGGAACATGCTGTCCAATTTGCTAGTGAATTTACAGCATTGTACACAAATGGAC CAGCTGGTGGCGGTGGTATCAGGTCAATGTTCCTTTAAATTTTTAATTTTTTTTGACAAAAATGTTCCTTTAAATTTGGC ACTGCATGTGTTTGATTAAAATTCCAAATGGCCAGTTCTTTTAGCTGATCTGTGTTAATTTGACAATCAATATTCTTCTA ATTGATGATTTCTGGTGACGCCTTAACTTTTATTATCAGAAGTTTCTCTGAACTTTCTGGTAGATCTCCATATTGTCTGG AATTATCAGATTCTGCACAGGGTATTTAAATTGTAATACTCTTGAAGGTTACATTTCAATTATTATATAAACTAGATATA ATTATTTGGGAAACTGCATATGTCAAGGAAGTTTGCAGAAAAAGTTGAAACCCGGTTGTTAAACTTTGAATAGAAAGTTA TTTTGCACTTATTATCTTCATGTTACCCGTCTTAGTTGCTGCAGTGAAGCTGTGATATTTATACTGAATATTTTTTCTGC CACTGTTAGTGATATATCTTTTTTGTTTGAATGCAGTACTGGATATAAGAAAGATATTCTTCTAGAAAAACAATTGGTAC TCTCTTCTTCCTTCCTCTCTTGGTCTTTCTCACACTTGCATATATGCAGGCACTAGGACTATACTAACATGGATCAGTCA ACAATGTTGTAAACCACAATTTCTGTAAAACAATTAAGAGAAGAGTCTTTTTAATGGAATAAAGTTAGTTGGTTGTTATT AAATCAACATTATGCCTCAGAGAAGAAAGCTTGGAAATTATTGATCAAACCGATCCCTCCATCTGAAACAAGTAGTGTTT GATTATATTAAGATGACCTTCTGAACTGTTGAAATCAGATAAACAATCTATTAATGAAATGCTTAATTTATTGACAAAAA AAGTTTGTATGTTTGTAAATTTGTAATGCTAAATGACCTTACTTTAAGTTTCATTACCATGCTCCGAGATTCATCATAGT TAGTTTTCTTCAGGTTAGGCGCGGAGATGTTTTCTGGAGAACTGGGGTAAAGAGAAACACAAGCAGCCAATCAAGTAAAG TAGTTGATCCTGAATGCAACCAGAAGCACACATTAACATTGCCACCAAAGTTACAAGCTGAAACTGAAGAATCCTCCTCA GAACTTGTTTCCTCTGGTAGGAGTTGCTTGCCTGCGCCATCTGGCCAGAAGATTCCACTTTACAATGTAGCACACAGCAG AGCTGGAGATAAAGGAAATGACATAAATTTTTCCCTCATCCCTCATTTTCCTCCTGATATTGAGAGGTTGAAACTAATTA TTACATGTCAATGGGTAAAATCAGTGGTCTCAGCTCTTGTGGATTTGTCCCCTTTTCCTGATTTAGATGCAAGAAATCAA AGAGATGAATGGTTCGATGAAAATGTTAAAGTGGAGATATATGAAGCTAAGGGTATCCAGTCATTGAATATTGTTGTGAG GAACATCCTAGATGGCGGTGTCAACTGCTCTCGAAGAATTGATCGGCATGGAAAGACCATTTCAGATCTCATACTGTGCC AACAAGTTGTGTTGCCTCCATGATTGAATGATTTGCTTCTAATATGGCAATGCTTGGAACTACTTTATTTCAAGTAGGGC TTCTGTAATTTTTCATATTATAGTTAAGGTGGGATAGAATCCATTCTGTTGTCTATAGTGTACAGGCATTGTGCTGGTAA AGATATGAATAGAAAATGGTGAGATTGAAGAAAGTTCTTCGTAAGAAAGAGGAAACAAAAGAAAACGTGGAAAAACTATC TTGTTTTGTTGTCAATATGGAAAAACTAATTATATATTCTTTGTTTAATGTTTTCTAGTTCTTTTTTGAACGTTTTGTTT TCTACTTTAAGAAAGGTCTTATGTATGCATGGAAAATATCGCTAGAAGAGTTAGTCCTACCATATTGTGATTGTTTTCGA TGCAACATTATTGTCTCAACTCTC
CDS sequence (LotjaGi3g1v0380500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAGTGGAGGAATTGACTATATATATTGATATTACATTACAGAGAAGTAGTCCTGAAAGGCGAAGGGATAAGGTTTA CATAGGCTGTGGAGCAGGGTTTGGTGGTGACAGACCTTTGGCTGCTCTGAAGCTGCTTCAAAGAGTCCAAGAACTAAATT ATCTGGTCCTGGAATGCCTGGCAGAGCGTACTCTAGCTGATCGATATCAAATCATGGCGTCTGGCGGCGATGGTTATGAT TCTCGTATTTCTAGCTGGATGCATATGCTGCTGCCTCTGGCTTTGGAAAGAGGAACTTGCATAATTACCAATATGGGTGC TAGTGAGAATTTTTTATACTCCATTCAAAAGATTTTATATGTTCTTCAAAATTTTGTATAA
Protein sequence (LotjaGi3g1v0380500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPVEELTIYIDITLQRSSPERRRDKVYIGCGAGFGGDRPLAALKLLQRVQELNYLVLECLAERTLADRYQIMASGGDGYD SRISSWMHMLLPLALERGTCIITNMGASENFLYSIQKILYVLQNFV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 15 | 110 | 96 | 2.2E-52 | – | |
| Pfam | 28 | 109 | 82 | 1.7E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0380500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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