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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0457800 |
| Transcript ID | LotjaGi3g1v0457800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ELMO domain-containing protein, putative; TAIR: AT1G03620.12 ELMO/CED-12 family protein; Swiss-Prot: sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A; TrEMBL-Plants: tr|K7KY55|K7KY55_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0457800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:87191281..87198726) extracted from Lotus japonicus Gifu genome v1.2.
TTTCATCACCTATGCTACAAACAAAGGATATCATGTTTGTCTTGCATGTAAAGTTGGTGGGCTAGGAAAGAAAAGCAAGC AAACAAACAAACAATGCTAGCCATAGCCAGAGCAGGGACACCCACCACCACTTTTCACCCAACTTTTTCAAAAAATTCAT CTTTTTCCATCACTAACTTTTTTGCAGCATAAAGTTAGGCAAAAAAATGATGCCTTTTGCTTTGATTGCTCTCTTATTAT GTTTCTCATTCAATTGAATTGGGAATTAGGGTTTTTAATCTCTCTCTCTCTAGTAATTGCTACAGGTAAAATCAGCGGAC AAACAGATTAGGAATGATGGAGAGGTTGAAGAATTATAGGAATCACATGAGTGCAATCATGGGTCCCTCCAATTTCTTTC AAAAATGGAATTTTTTTTTTGCCATTTTGCTTTTGGTTAAAAAAAAGGGTGAAAGTCCCTTGTGTTTCTGCGTGATTGCA TCCTCATGAGATTAAGGAAGCGGAAACGATGTTTTCCTTCTTGTTCCTCTCGTCTCAAAGTAAATTCAGCTCAGCATTCT CATATCTCTCTCTTAATCTCATTAGATCCTTCAGAATGTGCCTCTTTATCCTAAACTACAATGCATTTAAATAAATTATA ATAGGTGGATTGTAGTTTTCAATAAGTTCTTGAAAGTGATGTAGTTTCAAGTGTTTTTTGTTTCAATTGTATGTTACTTT GTTGTCTAACATTTTGTTTAATCTGTCTCTAATCTTGTTGTTGTTCTTCTTGTTCACATTTATAGCCCTAGTAATTTGAA GCATTTTTTCTTGTTAAGTAAAACAAAAACACTAAAGTAAAGATTCTTCCAATGCTATTTTTTAAGCTCTTTGAGATAGT GTACTATAATTCTTCCAACTAAGTGCATGAGATGTTTTGGTTGATTCATGAGTGGTTCATGTTCTCTTTATGCTATTACT CTTTGCTTAAAGATGCTTCCTAAATTGAAATGCAGGTTGATGAGGATGAGATTTATTGGAGACACAGAAAGGAAGATAAT GAGTTGGAATGGTCACATAATTCCACTCACTTAATAACTCAGTTGACTCGATGTTTGGGTGAGTAGATTATTTTTTTCTT GATCTCTGTCTTCTGTTTACATTTTTGTATCTCATGTAAAATCAGTTGGCTAATTGATTGATGTTATGTGTCAATGAGAG TATAGAAGATCACTGCACATTGTGAAAAATTGCAAAAACTAATCATATACTTAACAGATATTTTTACAAGCTTTCATGAG GACATTATCCTTCTTTAAATTAAAGTTTTTAAATGAATTTGAGTGAGCATGGTAACACTGAGAAGTGTGTGAAATACACA TGTCAACCTCTGCCTTTTCAAACAGAGAATAAGGACCTTCTTTGTTTGTTCTATCTAGGATTCACTTCTTACTTTCCCTA GACATTTTTGCAAAACTCAGTATCAAAGCATGCCTCTTCTGCATTCTATTTTATTTATTAGCAAACAGAGCATAGTGAAT CGGTAGAATGTATCAGAAGAACATATTTCAGTTCTGGAATTTAATATGCCATGATCTTTAACAATAAGCAACACAGCAGT TTGATGATTCTGTCCTATATTGCTATATCAGTTTATTCATCATCTAAATTCCTTCCATTGCTAATCCATATTTTGTTGCG TGTATAGCTAATGCTATGGTTGGACCACGATCATGGATAGGAGGATTCTTTCACCGCACAAGCACTAAACGAAGTGAAAA AATTGTTGACTATCCTTTGAGTTCTATTGAGGTAAAGGGAAAGACACAAGTTGGTGATATGTTGAATACTTTTAGCCACT TGTGACTTATGCTGTCAATATATACAAGACAATGTTCCTTTCAAACAGTAAAGGTGAAAGAATTTGGAACATTAAAGAAA AAGTACACAAGTCAAACTCTGCAATGCACTCCCCCACTTTCCAAGTTCATCACTGTTGTTACAGGTTCAGTGAGCTTAAC TTGTTTCATGTTTATGTCAGGAGGAAAGACTTCACAGGCTTCAAGAACGGCTGCAAGTGCCTTACGATGAAACTTGCCTC GACCATCAAGTAATTTTGTTTTTCTTGCAGCTACCATGCTTTCTTCTTGATTTCTCTTTTGTCCGTAGTTTGCTTATAGG AAATTCGGCAAAACTCGTGTTAGTTCTGTGTCTCTGTAGTATATGAATGGTTGAATACTTCAATTTTTTAGTTGTTAATT GGCTATGGTCACACCACATTTTACTAACAATGTCATTAACTTGCAACAGGAATCACTGAGAGCTTTATGGCATTGTGCCT TTCCTAATGTTTCTCTGGAAAGCCTGATATCTGACCAATGGAAAGACATGGGATGGCAAGGTCCTAATCCGTCAACCGAC TTTAGGTATACAGTTGTTTGCCTTACATTGACATTTTTGGTCACTTGTTTTCTATTTGAAAGGCTGCTTATTGAATATGG TAAAAACAGTGCCATTGTAATTTGTAGTGCTTATTAAGGTTCATATAATGAGATTTCATCTCATCTTTTTTCCTCATATA GTCATATTTAATGATTTCTTAATTTACAGACACAATTAGACCAAACCGTTTTATTTTACAGAAGTTAGATAGTCCTTCTA ATATCAATTTTATTAGATAATTACTGCAGATTAAATTATTGTCCTGGACTTTTTCTTGTGGAGATCTGTGTTATCTATGC CATAAACACTCTAAAGCACGAGTAGAGAGATCATCAAATTATGAATTCTTTTAAATATCTTTCTGGGGCATCCCAAACTC ATGCATATGGTGACTTGATAATGAGCCCGTTTGCATACGGACTTATTGGAACTTATTTACTAGAAAAAGCACTAGACAAG CTCCAATAAGTGCTCTTTAGTTTACATCCAAACGGGTTGAATGTTTGATTAGTTACTACATTGTATATGAAATCACTTGT TCATATATAATTAAGTTGTGTTATTCTTCACTTTTCCATTACCTCAAAATTTCTATTTGAAGGGTATTATTTCTGATAAC CTGATTTCCACAGAGGATGTGGCTACATTTCCCTTGAAAATCTGCTTTATTTCGCACGGAAATATCCGGTATGCTTTGTA TCTTCTATTATGCAAATCTGAAAGAACTTAATCTTCCTCTATGTCCTCTCATTTATCAGTTCCTAGATATTTTTCTTGGC GGAAAAGATGAGTTATTACTAATTTTATGGAAATTCAAATATGAAGGCATCTTTTCACAGGCTGTTGTTGAAGAAAGATG GAGATCGAGCTACATGGGAATATCCATTCGCTGTTGCTGGCATTAACATATCGTTTATGTTGATACAGATGTTGGATTTA TACTCAGGTTTGTATTAAACATTTGGTCAATGAAGTTTTTTAGATATATATATGCATTCAGTTACAATTTCTAAAAGCTT TTCCACTTAACGTTTCTTGCAGAAAAGCCTCGATGTCTTCCAGGCATGAATTTTGTCAAGTTATTAGGAGGTAAGTGTGG TACATGTCAATCTGTCTCTTTCAAATACTTTTGGATGTTTTACTCCTTCAAGTGCTTACAAGTTTCATTTTTTGGTTCTA CAGAAAACGAAGAAGCATTCGATATTCTGTACTGTATAGCTTATGAGATGATGGATGCACAATGGCTGGCTATGCATGCT TCCTACATGGATTTTAATGTATTCTTTCTTTCCCTGTGTTTTCTGCATTTCCATTACTTTCCCTTCTATGCCTCTAACTC CTTCAGTCACACACATACGAGGACAAAAAAGAAAAACATACTACAAGAACAACCAAGCCTTTTCCCACTAGGTTGGGTCG GCTTGATGGATCATACGACACCATAAAGCTCTGTGATGTATTAATTTAAACTGTTTACCTCTAAAAGAGTTTGGCTTATA CTTTTTCTCAGTGTACTTCTACCTTTAGCTATAGGTCTATCCTCAATTTGATCAACCCTCATAGTCATAGGTACTGTGAT TTAGGGCTTTATGTTACTAAACCACCAAAGGCAAAACTCTACAAACTTTTCTACAATGAGGGCTATTCTATTTTTTCGCT AACTATTTCATATCCTTCTTTTATCATGAATCCACCAATCTATCGTAACATTCTTTTTTCCACAATACCGATTTTACTTT CATTCTGACCTTTACCGCCCAAAATTCAGTCTCATAACATTACAGGTCTTATAGATGTATGGTAAAGTTTTCCCTTAAGC TTGATCAACCAAAATTGTAACATGGTTCACAAAAAAGGGAAAGTAATGATTCTTTACTTAATTTGTTATCCTGATTCCAA GCTCCTTTACAACTGTCTTCTTCCTTTTTCAGAAACTGCATTAGTCTGAATTCTAAAACACATACTACCTATCTTGTTTG GTCTTTTCACCTTTTGCTTTGCACTGCAATATATTAACCCTTCAAACTGCTTAATGGCTTCAGGAGGTTCTACAAACAAC ACGGATGCAATTGGAGAGAGAGCTATCCTTAGAAGACATCAACAAAATACAAGACCTGCCTGCATACAATCTGTTGTACA ATTAGCTTTACTCTTTCTCCTGTCCCACAGGCAACAAATTTCAAGTGGCACAATTTTGTAAGTATTGGATAAAGTTCCGT TACCAATTACCATGTCACTATCTGCATTCAACTGAAGGGATTTGCTTCTCTTGTGAATGAAAAATTGTACAAGTCACCTT TGAAGTTCTTCATAGCTGACATTTGGTAAATGAGCTGTTGACATTGAAAATGCATTTTTTTTGAGATTGAGATGCATTTT GAAATGGCAGCTGGAGTTTCATCAGTTGGGGAAAGAAATGAGAAGTGAGTACTCATCTGATATAATATAACAGTTCAAAA GAAAACTAGACATAAAAAACTAATAGGATTAAAATCTTTAAGATTATGGCGAGCATAAGCACTACAAAAGTTAATTCACT TGTTTCACCCCTTTTGGTCTTGAGTCTCTAAGAAATACATACTCTTAGCTTCACATGTCACCTTTCTGCATTTACTGTCT ACAATTATAGAAAACATTGATTGAATTGGTTTTAATTGATGTTACAGGGACTCAATAAGATTAATTCTCTCATTTCTCCT CCAGTTTCTATCTTATTGTCTTAACTGAAATCTATCTTACTTGTTATCCATGCCAAACTAATATAATTATGAAAATGATG ATAATGGTTGCATAAAATTTAAAACAATCATTTTGATGATACCATCATGAGTAAACTGATTAAGTTTTTTCGTAATTTAC ATGAAGAATACAATACAACATGGTTATTGCAATAAGTTGTTCAAAATGCTGAAGACAATTGTCTAAACTGGGTGCTAATT TGTTCCAAATTCTTAAGTGATTCTTTATGCACTTGTTGCAATATAGTGAATACGAAAGAGAATTTGCATCACTTTCAAAA CTCTAATGGGCATGATCTTCTGAATCTTCGTAATAGCGAAAAAGCTAATACAGTAGAATTGACAATAATGATTGAGTGCC TCTTTGGTTAACCTTGGGGCACCTTTCTTTATAACTAACTATTTGGACCCAATTTTCTATTTATTAAAGCATGTCGTGCG TAGAAAACTTAGATTAATGAGATAAGAATATATAAGAGCATCTTCAATGCAAGGTTCTTAGTTCTTATTTTTAACTTGAG AACTAAGAACTGAGTTCTTAACCATTGGAGGGGATGACGTGAAGTTCTTAATTCTTAAAAATAAGACCTGGGTTCTTATA TAAAAAGTTTTACTTTTTGAGTTTTTAGCATAAAAAATTAATTTTTTCTCTTTTATTCATTTAATTTAAGTATTGAATTA ACATTTAAATTAAAATTAAAATTATATGGAAATAAAAAATATTAATATAATGATATTGTGCGACCGGATTAATAGTGCTA AGAACTAAGAACTCATGATTGGAGCAAAATCTGCAAAAGTTGCTTAAGCACATGTGGCAATACGAGCCCACATGAATAGT GCTAAGAACTAAGAACTAGCATTGAAGATGCTCAAAGAATTGAGGAAATTGAACAATGAAAAATAATGGAATTATGAAAT GTATTAAAAAGCATGCTTGAATAAGATGACGTGTTTGTTGCGCGAGCATTATATGATAGTATAATTCTGTCATTATCTTA TCGTGCCCATCACGTGTATATTTTATCTTGAAGGAGAGCTAGGTTAAAATTATCGTGACAGGGTAATAATTTTCAATTAT TTTTTAGTACCAAAAACTCAAATTAAATTAATTCAATATTTATACTTTTTATAATTTGTAATTTTACTCTCAAAAAAAAT AATTTGTAATTTAATAGTTGTTAGTTGTTACTATAAAGTTTTTTTTTGAACTTTTTGTTACTATAAAGTTAAAATGAATT GTAGTTACTCATATACGCTTAATTAAAACTAATTTAACTTATAAATGGTGAAAATATAAGTCTTACTCGTATAAAAAGAA ATAACTTTTGATTCCTTATCACCTGCTACTACTTTATTAATATTATTTTGTTACTTATATTATAATTTCTAAAATATAAA CTAACTATACAGTAACACTAAAATATCGAGTAACTCACCTATAAATATTAATAATAAATATGGGTTCACTTTCTCATATC GTTTGGTGTTAATTACTTAAAACTATTTATGTACCTATACAATAGTTTCTGATTAAAATATTGACTATTGTTTTAAAATT TAATTAATGGTATTATTTATCACTTGCTACTATTAAATTAAATTAAATTAAATTAAATTGTTTACTTATATATTTTAAGT TTAAATACTAATTTATAAAAAATAACTTAGTTTTAGTAAATTTTAAAGCATATATAGACTCATTTATAGAAAATAAAAAA TAATATATTAAAATTATTAATTTAGAAGAATAAATCTAAAAAGAATTATATACTCAACTCAAGTTTTTTCTTGCCTATGA AATGATGTTGCTCTATTAAACCATTGTTGTTGCCGTCATTACCATCGTCACTGCTACCACTATTGCCACCACCACAACTG TCACAACCACCACCATTTTCCACCGCCCCTGCAACCACCATTGTCGTCACCACCACAAGCGCCATCACGACTGCCAACTC CCTACAAAACTGTCATCACCACTATTGTCACTGCCACCACCGCCACAACAAACCCCACCACCTCTCACAATCACCTCCCG CCACCACCATCACCACTATAACCACCCTCATTCTACCACCACCACAATTGTCACTGCCGCCACCATCGTCGTTGTCGTCA CTACCACTCGTCGTTGTCGTCACCACCATTGCTGCCGCCACTGTCCTACAAAACTGTCACCACCACCATTGCCACCGCCG CAACCAACTCCACCACTTCTCACAATCGCCACTAAACCACCATCACTCTACCGCCATCACCAACCACAACCACTGTCACT ATCGCC
CDS sequence (LotjaGi3g1v0457800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGATTAAGGAAGCGGAAACGATGTTTTCCTTCTTGTTCCTCTCGTCTCAAAGTTGATGAGGATGAGATTTATTGGAG ACACAGAAAGGAAGATAATGAGTTGGAATGGTCACATAATTCCACTCACTTAATAACTCAGTTGACTCGATGTTTGGCTA ATGCTATGGTTGGACCACGATCATGGATAGGAGGATTCTTTCACCGCACAAGCACTAAACGAAGTGAAAAAATTGTTGAC TATCCTTTGAGTTCTATTGAGGAGGAAAGACTTCACAGGCTTCAAGAACGGCTGCAAGTGCCTTACGATGAAACTTGCCT CGACCATCAAGAATCACTGAGAGCTTTATGGCATTGTGCCTTTCCTAATGTTTCTCTGGAAAGCCTGATATCTGACCAAT GGAAAGACATGGGATGGCAAGGTCCTAATCCGTCAACCGACTTTAGAGGATGTGGCTACATTTCCCTTGAAAATCTGCTT TATTTCGCACGGAAATATCCGGCATCTTTTCACAGGCTGTTGTTGAAGAAAGATGGAGATCGAGCTACATGGGAATATCC ATTCGCTGTTGCTGGCATTAACATATCGTTTATGTTGATACAGATGTTGGATTTATACTCAGAAAAGCCTCGATGTCTTC CAGGCATGAATTTTGTCAAGTTATTAGGAGAAAACGAAGAAGCATTCGATATTCTGTACTGTATAGCTTATGAGATGATG GATGCACAATGGCTGGCTATGCATGCTTCCTACATGGATTTTAATGAGGTTCTACAAACAACACGGATGCAATTGGAGAG AGAGCTATCCTTAGAAGACATCAACAAAATACAAGACCTGCCTGCATACAATCTGTTGTACAATTAG
Protein sequence (LotjaGi3g1v0457800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRLRKRKRCFPSCSSRLKVDEDEIYWRHRKEDNELEWSHNSTHLITQLTRCLANAMVGPRSWIGGFFHRTSTKRSEKIVD YPLSSIEEERLHRLQERLQVPYDETCLDHQESLRALWHCAFPNVSLESLISDQWKDMGWQGPNPSTDFRGCGYISLENLL YFARKYPASFHRLLLKKDGDRATWEYPFAVAGINISFMLIQMLDLYSEKPRCLPGMNFVKLLGENEEAFDILYCIAYEMM DAQWLAMHASYMDFNEVLQTTRMQLERELSLEDINKIQDLPAYNLLYN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 53 | 287 | 235 | 5.2E-137 | – | |
| PANTHER | 53 | 287 | 235 | 5.2E-137 | – | |
| Pfam | 93 | 258 | 166 | 8.4E-47 | ||
| ProSiteProfiles | 108 | 269 | 162 | 28.85 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0457800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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