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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0060400 |
| Transcript ID | LotjaGi4g1v0060400.2 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DEHYDRATION-INDUCED 19; TAIR: AT3G05700.1 Drought-responsive family protein; Swiss-Prot: sp|Q688X9|DI191_ORYSJ Protein DEHYDRATION-INDUCED 19; TrEMBL-Plants: tr|A0A0S3QZF6|A0A0S3QZF6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0060400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:7271313..7275392) extracted from Lotus japonicus Gifu genome v1.2.
ATCCTAACCCAAGACCGACATTTCCTCACATTTGTTTTAAGCCCAACTTCGATGCTAACCACAAAACACAACTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATTTGAGTCGGCATTTCTGAAGCTCAGAAAAAGTCAAAATCCTTTTGGG GAAAACAAAGGCTCAGAACTTGAGATCACCTTGAATCTCAAAACATTTTCATTCATCACAAGAAAAATTTGGTTGAAGGT GGTGGTGACTTCATTTGATTTGATTCAATCGAGTTATTTATTTGATCCCTTCAATGGATTCTGACTTCTGGACCTCGCGT CTTGCCGCCGCCAAACGCCAATATACTCTCCAGCATCACCATCCAAGCTCCCATTTAGGTTGGTGTTCTTGGAGGTTCCC AGTTTTTAATTTTCTGAGAAAAAACAATTCTGGGTCTTGTTCAAAATCTGATTTTTTTTTTCTGGGGTGTGTTAAAATCT GATTTTTTATTTCTGGGGTGTGTCAAAATCTGATTTTTTTTGTTTCTGGGGTGTTTCAGATCGGTTGGGAGTCGATGATT TTGATGTGGAAGAAGAGGTGCGACCAGATTTCCCTTGCCCGTATTGTTATGAAGACTTTGACATCGCTTCCTTGTGTTCT CATCTTGAAGATGAACATTCCTGTGAATCAAGAGTCACGGTAGGAGGCTCTTTTTGCATCTGATATTGTTTCTTGTGTTG TTATTTAGATCTATGTTCTGTTCTTCTTTGATACGTTTGTTTGGTACAATTGTTTTTTTAATCTTCTGATAGGTCCTGCT AAAGAAATTTGTAGCCTTGATAGCAAAGTTGTTAGAAGATTAGTATTAGTTTCTTCAAATGATTGAAATGAAAGCTTATG GATACTTTAGCTAGTTGTACAGAGGAAATCCATGAAGGATTGAATTTTCTCTTTAAGATACACAATGATCATATAAAATG AGATATTGGGGAGGTGCCTATCCTAGAAATTAGAAAAGCTTACCGAAAATCAGTTTAGGTGGTATGATTATGGAGGTACT GGTGAAAAGAGTTGATAACATGGTCTTTAGTCCTATGAAGAGGGGTAGAAGGAGGCTGAAAAGAACATTGAAATGAATTG TTAAAAATGATCCAATTATCATTAATATCGCTCAAAGTCTGGTTTTTGATCGAGTTCAATGGCGTAGTTTAATTCAAATT CATATAGCCGACCTCACTTAGTGGAATAAGACTTTTGTTGTTGTTGTGGTTGCTGTTCTTGTTGTTTTCAGTCTTAGATA AATTCCAAGACCTGCCCTGCTGCATAAGTGCATATAGCGACATTTTTCTGCATCACTGATTAATATTTAGGATCTTGGGC ATGTTACCTACCTCCCATAGGTTCTTGTCATGTTCTTCCTTTTGATTGACCTGAAGATAAGGCTTTAGAATTGTGATTTT CTGGTTCACACTAGCATGCGAACTTGTGACCTTCTGTTTTCTACCACTCCTCCTTACTCCTTATGAAAGATACTTTAGGA TTCGGTTACAACATATCAAGAAACGACAATGTGAGTTCACTCAAGAATGTGCATGACTAATTAAGTTGAACTTTGTGGGG GAATAGAGTTTGCGTGTCAAGCGGAATTATGTGGTTTTGTTGGGAGTTTGTAATCTATTGTAATTATAATATAGTGAGTG GACAACCATAGACAATTCATAGATAGAAAAAAAAGGTTCAACGGTGTATAACCGAGAAGGCCCTATGCTAAACCTTTTCT TTCTGCATAGATACACTTAGAGCGTATAGCTCTAATGAGAATTGTTTCTCTTGTTCGAATTATTTGAAAATGCCCTGATG TATTGTATATCTTTGTGCCAAAAGAACACCTCATCGAGATGGTAGACGGTTCTATATCATTTCATAAAAAAAAAGGAATC TGTTAGCTATCATTAACAATATTCTGATCATTGAGATTGATTGGCTTCTCAATTGAAATACAGTTGGTTTTGTTTAGTTT GATGAATTTATATGAATAAACTAAATTAAGGAAATACCTAAGAGGCTGAAGATTAGTGTTTAGTGTCTGTCTTATTACTT CACATCCCTGCCTCAAGGATTGAAGTGACTCTAATCTGAATGTGATAGTCTCATGCTTTGTTTTTCTATCATGCAGATTT GTCCTATATGCTCAGTTAAAGTTGCACGGGACATGTTGAGTCACATAACGCTGCAACATGGGCACTTGTTTAAGATATCC TTTATCATGTTGTTTTGATTGAAAATAATGTTTTGCTTAGATAATGAGTTGTTTCTCATGTAGAAAATGAAAAAACTTTG ATTGCTTCCCTTAACTGAGGATTACATACAGAGAAGGCGCAGGTTAAGAAGAGTTGCTATTCCAAACAGTCAGACATTGT CTCTTTTAGGTCGAGATCTTCGCGAGGCTCATTTGCAGGTGCTTCTTGGTGGTAGTGGTGCAGGACATCGGTCATACAGA GACACAGTGTCCAATGCAGCTACTGATCCATTCCTATCCTCTTTTATGTTGAATTTCCCTGCTTGTGAAGCAGAAGAGAT TTCTAAATCTGTGGTATCGAGTGCTGAAGATTCTGCTGCAAAGAGTACAGCACCTGCACATATTTGGAAATCAAGGTGAT TTTTTTATTAGTTTTGGCTCCTTAAACATTGCTAACAGAAATAAAAAAAGCCTTATCCCACTAAGTGAGGTCGCTGGTCG GCCAAATTGGTCACATGATCCATATTTAAGAAACAGCAGTTTTAAGTTGGCTGCCGCAGGCCTAACATAACCTTTTGTCC TTCAAGCGGGCTTTAGGACCGGCTATGTGGAGTTTGGCTCCTTAAACATTATTTAATAAAAATATATTGACCAAAAAATT TAATATTGAGTTAAAAAATTTCAATCCCTCAAATTTACATAAAACTGTAGAAAATGCGTCAGTATTGTAGTAAATCATTA TCCTCCTTATATTAGAATCTTTCCTAAACAATTCTAATCCCTCAAATTGTTATGAAACTCTAGAAAATGCATTAATATAT TAAACCCTTGTAGTGAGTCAATATCTTCGTATATTTGTGATATACATGTACTAAAATACTTCAACATGTCTCGAATATCG GCCATGTATGAAACTGGTTTTGCATGTTCCTCTGGAAGAATTTGTTACACCCTCAAATGAACTGAATGTAATGCCACAGG GTGGGCAGAAGCTGAATTTGTGACCTTTGGCTTTCATACTATTTACTAGTTGTTCGTATCTCTATTTATCTTTTTTTGGG TGAATATGTTCTTTTGGTGCATATATCTATTTATCTAGGAACTGATTAGTTCACTGGGAGTTGATAAACTTACCCCTCAT TCAAACCAAATTTTCATACTCATCCACATCAAGAACATGTTTGGATCGGCTTCTCTTTCCAGAAAATCAGTTCTGCCACT CAAAAGCTACTCATAAGTTTCTCCCCATAATTGATTTTGGCTTTAGAATCCGTTGTAGAAGCATATCCAAACATTCACTG AATAGTGCCCTTGAATCACAGCTTTGATCTGTCCCCTCTTTGCAGTTTTGATCCCTCCTTGAGTATTGAAGAGCGAGAGA AAAGGATAAGACAAGCTGCTGGGAGATCTGGTTTTGTGCAGGATTTGTTTCTTTCAACTTTGTTCAACGACTAATGGTAG CTGTAAGTTGTTTAGAAAATAATAAACAAGCATGCGATCCATCGTTAAGAATCTGTGCTGAAGGATATCTCAAGTGGGTT AAGTGGGGCTATTTGACAATGGAAGCTTGCATGAATGGGATTTTGTTGCTGAATCTGATGAGAGTTGCCATTTATCCCAT CCATGTATGCACAATCTGCACTAGAGATGTATTTTTACTTTCCCAAAAAAGAAAAGCCTTCTAGCTTATGGAAAGACTTG TTTTGTTATATTGGCTATATGATAACCTAGAATTTCGAGAAACAGGAACCCTTATGCTTCATTTTCATTTCCTTGTTGAA TTTGCTGAAGAAATTAATTCATTCGACGAAATTATATTGACAACTCTACTTAAAAAAAAGTGCATCGGAATGTATTATTT
CDS sequence (LotjaGi4g1v0060400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTCTGACTTCTGGACCTCGCGTCTTGCCGCCGCCAAACGCCAATATACTCTCCAGCATCACCATCCAAGCTCCCA TTTAGATCGGTTGGGAGTCGATGATTTTGATGTGGAAGAAGAGGTGCGACCAGATTTCCCTTGCCCGTATTGTTATGAAG ACTTTGACATCGCTTCCTTGTGTTCTCATCTTGAAGATGAACATTCCTGTGAATCAAGAGTCACGATTTGTCCTATATGC TCAGTTAAAGTTGCACGGGACATGTTGAGTCACATAACGCTGCAACATGGGCACTTGTTTAAGATACAGAGAAGGCGCAG GTTAAGAAGAGTTGCTATTCCAAACAGTCAGACATTGTCTCTTTTAGGTCGAGATCTTCGCGAGGCTCATTTGCAGGTGC TTCTTGGTGGTAGTGGTGCAGGACATCGGTCATACAGAGACACAGTGTCCAATGCAGCTACTGATCCATTCCTATCCTCT TTTATGTTGAATTTCCCTGCTTGTGAAGCAGAAGAGATTTCTAAATCTGTGGTATCGAGTGCTGAAGATTCTGCTGCAAA GAGTACAGCACCTGCACATATTTGGAAATCAAGTTTTGATCCCTCCTTGAGTATTGAAGAGCGAGAGAAAAGGATAAGAC AAGCTGCTGGGAGATCTGGTTTTGTGCAGGATTTGTTTCTTTCAACTTTGTTCAACGACTAA
Protein sequence (LotjaGi4g1v0060400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDSDFWTSRLAAAKRQYTLQHHHPSSHLDRLGVDDFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESRVTICPIC SVKVARDMLSHITLQHGHLFKIQRRRRLRRVAIPNSQTLSLLGRDLREAHLQVLLGGSGAGHRSYRDTVSNAATDPFLSS FMLNFPACEAEEISKSVVSSAEDSAAKSTAPAHIWKSSFDPSLSIEEREKRIRQAAGRSGFVQDLFLSTLFND
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 232 | 232 | 6.0E-116 | – | |
| PANTHER | 1 | 232 | 232 | 6.0E-116 | ||
| Pfam | 45 | 97 | 53 | 3.6E-20 | ||
| SUPERFAMILY | 46 | 119 | 74 | 3.66E-5 | ||
| Pfam | 119 | 230 | 112 | 3.1E-34 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0060400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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