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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0064200 |
| Transcript ID | LotjaGi4g1v0064200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Vascular plant one zinc finger transcription factor protein; TAIR: AT1G28520.1 vascular plant one zinc finger protein; Swiss-Prot: sp|Q9SGQ0|VOZ1_ARATH Transcription factor VOZ1; TrEMBL-Plants: tr|I1KLR2|I1KLR2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0064200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:8044072..8047487) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAGAAGGTTTCCAAGACAAGCTGCAAGTCTGCATCACACAAGCTCTTTAAGGACAAGGCGAAGAATCGTGTTGATGA CCTGCAGCTGGTGTTTCTTGATCTGCAGTTTGCTAGGAAGGAGAGCCGTACGGTTGATGCTGCAGTTCTTGAGGAACAAG TCCATCAGATGCTTCGTGAGTGGAAGAATGAGCTCAATGAGCCTTCGCCTGCTTCTTCTTTGCAGCAAGTAAGATGATAT TCCGAGATGTAACTGATTAGTCTTTGTTTGAAATATCTATCATGGGTTCTTGTTTCTTATCTAACCTTTACTTTTCCAAT TCTGATGGAGATGTGTGAACTTGAATGGCAATATTAGTGGTAAGGCTGTGATTGTGAACTTTGGTGTTTGTGGGTGATTT TAGGATGGCAGTCTTGGGTCATTCTCCACCGATATCTGTCGGCTTTTGCAGCTCTGTGAGGAGGAAGATGATGCCTCTAG TCCATTAGCTGCACCTAAGCCTGAGCCTGTTGATCAGACTCTTCCAGCTGGGAGCAAGGTCATATTCCAAGGGGTGAGCT TCCTTTTCCTTTTTGGGGGATAACTAATTTATTTTAGCTATAATAATTCTGTGATGTTAGCTGTTTGAGTATTGATTATA AAGTGTTAGCTGTTTGAGTATTGATTGTAAAGTTTCACTATATTTATTAGGAGATGCTTCAGAAATGGTTGATGTCATGT AAAGTAAACTGAAAGACATCATCCTGTGACCTCTTTCTTTCACATGCAGACCAATGTTGACATAGTTCTAATGTTGAGTA TGTGAAACAAGGCCTCTCTTCAACAATTGTATTTGGATTGAATAGATTATATATTTCTTTGTGTTTTCCTTGGGTGGGGT GTTAAAGTAGAGGAGGCAAATTCATCATCGGGAGGGGATATAAATGTCCGACATCTTGTCAACCTTGTTGTAGAATATAG AGCACTTTATGATATGTTGATGCGCTTGCACTCAAATTTGTTTTGGTTATCATTAACTGATTAGCATTGTGATTGAATTG TATGCATTGCAATTCGATTCACACAATTTGGTGCTGAGCCTTCTCCCAATTGCTATCGACTGCATGGAGTACATTTACTT GGTGGATTTTGAATTGCTGTGACCATGGTAAAATCACACGAATCTCAATTATTCTGTTCTGTGATTCTGGCTGTACAGAT CTTGGAAGGACAGTGTGCCAAACATCTACTGTGTGGTGATGATGGAATGGTTTGGTATGGCCAGAATGTTGTCGGTAGAG AGTTATATGTAGATGGTAGCTGAAGACAGGCTTAGGTGTGTCATGGCTTGTTGCTGGAGGGGGGGGGGGTTGTCCAGTCT CCAGTGGCAATGAGCCTCGAACCTAGGCAAAGGAGCACTATATAAATCCATGTATTTTTTTGGCCAGGATTGGCCATTGG AATGTATTTTTCTTTCTGGGTGACTTAAGGAAATGCTATACAGATCAAAGCATTAAGAAGGGTCTAGATTAAACAATGTT TTATGGTTAGGAATTGAGGTCACTTGATCTAATGTAGCTGACCTCATCTAGTGGAAAAAAGCTTTTGTTGCTGTGGTAGT GTAGTGGAGATAAAACTACAAAAGCAGAGGCAGAAAACTAGTGTCTAAGATGAGAAACTTTCATCTCATTTGCAAGCATA TTAGCAGATAAAGGTTGAGACCAGGGGAGGGAAATGGAGAACACACATTCAGTCACTCGTTCTAAGGATGAATTACGAGA GCAGCGTATATTGGTCTAGTCCTGGTTGAACTATCTAATATTTGGTTAATTTTTAGATCCTATTTTTTTTTATAATGTCT AGTATGCAAGCCGACGAAGGGTGAGACCAGGGGGAAGGAAATGGACAAGACACATGTTACTATATTTAATTTTGCCTATA GAGTTAAGCATATATTGGATTAATTCCTGGTTTTCTGGTTAAACTATCAAATCTGGGACAATTAAGACGTAATTATTTTG GTGATGATTGTGTACTGTTTTTGATCCATATGTGTAAGATGATATTATCTCAATTGAACGATTACTTTCTATTGCAACAT ACATTTGGCAAGTTTTTTTGCTGCCCTTGTTTAATATTCCTCGAGTAATGGAAAACAAGAGAGGACACTCTTATGGTTTA GCCATTCTTTGGAGTTTATGATTGTATTTTTCTCCACATTTTCTCCACCTGTAATTGTAATAAGTTTCCTGATTTAATTG TAAACCAGGGCCAACAGCAACATGATTTTCCATTGGTTAATGAATGCAAGCACTCAACCTCAAGAGCTCAAAATATGGCA GCTAACAAGCCAGATGGACCTGCTTTAGAATATCATCAGTTTGATTTGCATCAGGACTTTGATCACAGCTTTTATACTGG ATTTAATGGCTCAGGTTATTGTGAGGAGGATGCTATTCCTCATATATCTAGCTATCTACCCAGTATCTGCCCTCCACCTT CTGCTTTCTTAGGCCCAAAATGTGCACTTTGGGACTGTCCAAGACCTGCACAAGGGTTGGACTGGTGTCAAGATTATTGC AGTAGCTATCATGCTGCTCTAGCTTTGAATGAAGGTCCACCAGGTATGGCCCCAGTTCTACGACCTGGGGGCATTGGTTT GAAGGATAATCTACTTTTTTCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGTCGGCATCCCAGAATGTGAGGGAGCAG CAACTGCAAAGTCTCCATGGAATGCCCCTGGTAATTTAATCTTTTATATCTTTTCTTCAGTTTACATTTAACTATTTTAT ATATATCCGCTAAAAGAGCTTACAGGATTTTTCTTTCTTTAATTGATTTGCTTCATGTTTGATTGCAGAACTCTTTGATC TTTCTGTTCTTGAGGGTGAGACTATCAGGGAGTGGCTCTTCTTCGATAAGCCTCGGCGAGCATTTGAGAGTGGAAACAGA AAGCAGAGGTCATTGCCAGATTACAGTGGACGCGGTTGGCATGAATCTAGAAAGCAAGTGATCAATGAATTTGGAGGGCT GAAGAGATCCTACTATATGGATCCACAACCACTGAACCATTTCGAGTGGCACCTTTATGAATATGAGATTAGCAAGTGTG ATTTATGTGCCTTGTACCGATTGGAACTGAAGCTCGTTGAGGGAAAGAAGAACTCCAAGGCAAAATTAACAAACGATTCA GTTGCTGATCTGCAGAAGCAGATGGGAAAGCTCTCCGCCGAGTTTCCGCCAGATAACAAAAGGCCTGCTAAAGGCAGAGC CAAAATCAATGCCAGAGTTGCCATGGGTGGTGTCTATTCACACAGAGTGACTCCACTGAACGGAACATATGAGTATGGGT TAGCTTCCCCATATGACTACCTTGTTGACAACTTGGGTGACTACTATGGGACATGA
CDS sequence (LotjaGi4g1v0064200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAAGGTTTCCAAGACAAGCTGCAAGTCTGCATCACACAAGCTCTTTAAGGACAAGGCGAAGAATCGTGTTGATGA CCTGCAGCTGGTGTTTCTTGATCTGCAGTTTGCTAGGAAGGAGAGCCGTACGGTTGATGCTGCAGTTCTTGAGGAACAAG TCCATCAGATGCTTCGTGAGTGGAAGAATGAGCTCAATGAGCCTTCGCCTGCTTCTTCTTTGCAGCAAGATGGCAGTCTT GGGTCATTCTCCACCGATATCTGTCGGCTTTTGCAGCTCTGTGAGGAGGAAGATGATGCCTCTAGTCCATTAGCTGCACC TAAGCCTGAGCCTGTTGATCAGACTCTTCCAGCTGGGAGCAAGGTCATATTCCAAGGGGGCCAACAGCAACATGATTTTC CATTGGTTAATGAATGCAAGCACTCAACCTCAAGAGCTCAAAATATGGCAGCTAACAAGCCAGATGGACCTGCTTTAGAA TATCATCAGTTTGATTTGCATCAGGACTTTGATCACAGCTTTTATACTGGATTTAATGGCTCAGGTTATTGTGAGGAGGA TGCTATTCCTCATATATCTAGCTATCTACCCAGTATCTGCCCTCCACCTTCTGCTTTCTTAGGCCCAAAATGTGCACTTT GGGACTGTCCAAGACCTGCACAAGGGTTGGACTGGTGTCAAGATTATTGCAGTAGCTATCATGCTGCTCTAGCTTTGAAT GAAGGTCCACCAGGTATGGCCCCAGTTCTACGACCTGGGGGCATTGGTTTGAAGGATAATCTACTTTTTTCTGCTCTTAG TGCAAAGGCACAAGGAAAAGATGTCGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCCCCTG AACTCTTTGATCTTTCTGTTCTTGAGGGTGAGACTATCAGGGAGTGGCTCTTCTTCGATAAGCCTCGGCGAGCATTTGAG AGTGGAAACAGAAAGCAGAGGTCATTGCCAGATTACAGTGGACGCGGTTGGCATGAATCTAGAAAGCAAGTGATCAATGA ATTTGGAGGGCTGAAGAGATCCTACTATATGGATCCACAACCACTGAACCATTTCGAGTGGCACCTTTATGAATATGAGA TTAGCAAGTGTGATTTATGTGCCTTGTACCGATTGGAACTGAAGCTCGTTGAGGGAAAGAAGAACTCCAAGGCAAAATTA ACAAACGATTCAGTTGCTGATCTGCAGAAGCAGATGGGAAAGCTCTCCGCCGAGTTTCCGCCAGATAACAAAAGGCCTGC TAAAGGCAGAGCCAAAATCAATGCCAGAGTTGCCATGGGTGGTGTCTATTCACACAGAGTGACTCCACTGAACGGAACAT ATGAGTATGGGTTAGCTTCCCCATATGACTACCTTGTTGACAACTTGGGTGACTACTATGGGACATGA
Protein sequence (LotjaGi4g1v0064200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKKVSKTSCKSASHKLFKDKAKNRVDDLQLVFLDLQFARKESRTVDAAVLEEQVHQMLREWKNELNEPSPASSLQQDGSL GSFSTDICRLLQLCEEEDDASSPLAAPKPEPVDQTLPAGSKVIFQGGQQQHDFPLVNECKHSTSRAQNMAANKPDGPALE YHQFDLHQDFDHSFYTGFNGSGYCEEDAIPHISSYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSYHAALALN EGPPGMAPVLRPGGIGLKDNLLFSALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFE SGNRKQRSLPDYSGRGWHESRKQVINEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDLCALYRLELKLVEGKKNSKAKL TNDSVADLQKQMGKLSAEFPPDNKRPAKGRAKINARVAMGGVYSHRVTPLNGTYEYGLASPYDYLVDNLGDYYGT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 475 | 475 | 3.9E-244 | – | |
| PANTHER | 1 | 475 | 475 | 3.9E-244 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Biological process | Positive regulation of long-day photoperiodism, flowering | Any process that activates, maintains or increases long-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase. |
Expression pattern of LotjaGi4g1v0064200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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